Microbiology Flashcards

1
Q

Define a UTI

A

The presence of micro-organisms in the urinary tract that are causing clinical infection

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Differentiate between an Upper and Lower UTI

A

Lower UTI = infection confined to bladder (cystitis)

Upper UTI = infection involving ureters +/- kidneys (pyelonephritis)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

The lower end of the urethra is usually colonised by what bugs and why?

A

bacteria (coliforms and enterococci from the large bowel - due to proximity of anus to urerthra)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is meant by a complicated UTI?

A

Pt has:
systemic symptoms
OR urinary structural abnormality /stones

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Bacteruria does NOT always mean infection. TRUE/FALSE?

A

TRUE - Bacteriuria just means bacteria present in urine

does not always mean infection,
esp. in elderly patients or patients with catheters

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Cystitis is caused by an infection. TRUE/FALSE?

A

FALSE
Cystitis is inflammation of the bladder
(not always due to infection)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Why are women at more risk of a UTI than men?

A
  • short wide urethra
  • proximity of urethra to anus
  • increased risk with sexual activity, pregnancy
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What are the two main routes of infection with a UTI?

A
  • Ascending infection

- bloodstream

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What bacteria is usually responsible for UTIs?

A

E-coli

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What types of bacteria can be responsible for UTIs?

A

Lactose fermenting Coliforms (ecoli, Kelbsiella, enterobacter etc.)
Lactose non-fermenting coliforms (proteus, providencia)

Pseudomonas (Gm -ve bacilli but NOT a coliform)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What features of E-coli contribute to its virulence?

A
Endotoxin = released in sepsis
Fimbriae = allow to adhere to the wall of urethra and climb upwards
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Describe when proteus would normally be found?

A

in Struvite Kidney stones

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Describe the presentation of proteus in the lab

A
Foul smelling (burnt chocolate)
Swarming cultures
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What does proteus produce and what does this cause?

A

Produces urease
=> breaks down urea to form ammonia (NH4+)
=> increases urinary pH - precipitation of salts

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

When would you suspect a pseudomonas UTI?

A

Associated with catheters and instrumentation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What antibiotic is the only oral option for a pseudomonas infection?

A

resistant to most oral antibiotics

except ciprofloxacin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

How does ciprofloxacin work?

A

Inhibits bacterial DNA gyrase

=> prevents “supercoiling” of bacterial DNA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

In what patients should ciprofloxacin be avoided?

A

young children

pregnant women

19
Q

What bugs does ciprofloxacin NOT cover?

A

Staph aureus or MRSA

20
Q

Where is an infection such as Enterococcus faecalis

most likely acquired?

A

In hospital

21
Q

Who is usually affected by Staphylococcus saphrophyticus UTIs?

A

women of child bearing age

22
Q

What symptoms indicate a lower urinary tract infection?

A

dysuria (pain passing urine)
frequency of urination
nocturia
haematuria

23
Q

What symptoms may indicate an upper urinary tract infection?

A

Fever
Rigors
Loin pain

24
Q

When do you want to take a specimen to check for evidence of UTIs?

A
  • Midstream specimen (as first pass of urine will be contaminated)
  • Suprapubic aspiration
  • Straight (in/out) catheter
25
What container can be used for a urine specimen where it will take longer than 2 hrs to reach the labs?
Boricon container contains boric acid to stop bacterial multiplying works for ~24 hrs
26
What patients should NOT undergo dipstick urine testing?
DO NOT DIPSTICK URINE OF THE ELDERLY | DO NOT DIPSTICK CATHETER SPECIMENS
27
When is microscopy of urine used?
If cultures have been identified but the lab wishes to be more specific with the diagnosis
28
Over what number of bacteria in a urine specimen would indicate an infection?
>10^5
29
What is an abacterial cystitis?
Patient has symptoms of UTI | Pus cells present in urine, but no significant growth on culture
30
What can cause an abacterial cystitis?
early phase of UTI urethral trauma - “honeymoon cystitis” urethritis caused by chlamydia, gonorrhoea
31
If antibiotics cannot be given, what treatment can provide symptomatic relief in abacterial cystitis?
Alkalinising agents
32
When is asymptomatic bacteruria treated?
Treated with antibiotics in pregnancy. If left untreated: - may progress to pyelonephritis => lead to intra-uterine growth retardation (IUGR) or premature labour
33
When should catheterised patients be given antibiotics?
When there is evidence of symptoms of infection
34
How is a female Lower UTI treated?
Trimethoprim or nitrofurantoin orally (3 days)
35
How is an uncatheterised male UTI treated?
Trimethoprim or nitrofurantoin orally (7 days due to prostatism risk)
36
How is a complicated UTI/ pyelonehritis treated in the community?
Co-amoxiclav or co-trimoxazole (14 days)
37
How is a complicated UTI/ pyelonehritis treated in hospital?
Amoxicillin and gentamicin IV for 3 days
38
Why is gentamicin only used in hospital settings?
Can only be given IV | Narrow therapeutic index before toxicity
39
What antibiotic should be given if a patient has an ESBL infecting organism?
``` Pivmecillinam (oral) and Temocillin (IV) ```
40
When should trimethoprim be avoided?
1st trimester (3 months) of pregnancy
41
Why is amoxicillin not used first line to treat UTIs?
>50% of coliforms including Ecoli are now resistant
42
When would cefelexin potentially be used to treat a UTI?
If organism is amoxicillin and trimethoprim resistant
43
What patient group is Temocillin useful for?
Useful in patients whose renal function is too poor for gentamicin **NOT as effective as gentamicin clinically**