Micro Flashcards

1
Q

What are common symptoms and causes of typical pneumonia

A

High fever Chills Chest pain Bronchioles or lobes look consolidated on CXR Causes Community acquired Strep pneumonia (most common) Staph A. Haemophilus influenzae Hospital Gram negative rods

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are characteristics of S. Pneumoniae

A

Gram: +
Shape: Lancet diplococci
Catalase: -
Other: Alpha Hemolytic, Capsule prevents oppsonization, makes it smooth on auger
Sensitive: Optochin and bile
Causes: pneumonia, bacteremia, Otitis media, Meningitis

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

how is Strep. Pneumo so virulent

A

The capsul! Prevents deposition of C3b on the surface. It’s a straight up compliment shield, thereby avoiding complement activation.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

How do strep pneumo vaccines work

A

Antibodies can target specific capsules, allowing the Strep. Pneumo shield to be removed and thereby stopping virulence. Critical! Vaccine is serotype dependent and there are about 100 serotypes

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What is the pathogenesis of s. Pneumonae

A

Inspired Into alveoli If not phagocytized Multiplies Spreads Inflames Either resolves or death Predisposing factors Sickle cell HIV Splenectomy C3b deficient

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

Describe serotype vaccines for strep pneumonia

A

We now have a T cell assisted vaccine to the 13 most common serotypes Recall that children under 2 can’t really develop t independent resistance, but by coupling a protein to the capsule, all ages can build an immune response

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Describe the Chlamydia developmental cycle.

A

C. Pneumonae. And others Obligate intracellular bacteria

They cannot grow on agur

Divides by binary fission

Cell envelope similar to gram negative

Elementary bodies attach to cell

Reorganize to RB form while in vacuole Replication to fill the cell (expresses antigens at this point)

Regress to EB form Explode outward and infect other cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Chlamydia pneumoniae and others.

A

Gram: -
Shape:
Elementry bodies are small and dense

  • *Other:** psittaci is from rare birds, wall lacks muramic acid
  • *Sensitive:** Azithromycin > Doxycycline
  • *Causes:** Atypical pneumonia (pneumoniea and psittaci), urethritis, PID, conjunctivitis, reactive arthritis (trachomatis)

Cannot grow on artificial media. Live in the phagocytic vessicles of hosts.

Chlamys = cloak

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Discuss the structure of a typical Mycoplasma cell and compare it to the structure of other bacterial respiratory pathogens.

A

Gram: No stain

Shape: pleomorphic - can bypass filters

Cold: agglutinates (IgM)

Other: Sterols in walls, facultative aerobes

Sensative: Tetracycline or erythromycins (penicillin wont work because no wall.

Causes: Walking pneumonea, Military and prisions

Viral like features: Very small 0.15 micron Antibacterial resistant Lack cell wall and peptidoglycans (resist penicillin) Do contain sterols in walls, only bacteria that does Pleomorphic - pass filters Cold aglutinin Facultative aerobes Reproduce slowly by binary fission Smallest free living organism Pathogens M. Pneumonae M. Homonis Causes “walking pneumonia” Common in military, Requires person to person contact

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

List the etiologic agents associated with atypical pneumonia

A

Chlamydia pneumonia 10% Mycoplasma Pneumoniae Mycobacterium tuberculosis (Sometimes) Legionella and pseudomonas

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Explain the pathogenesis of respiratory infections leading to atypical pneumonia including transmission, symptoms, and stages of the disease

A

Mycoplasmas Inhaled Attach to lower respiratory tract - P1 protein Causes cilia stasis Produces CARDS toxin Immune response leads to macrophage phagocytosis (can cause inflammatory damage) Diagnosis is virtually one of exclusion, because isolation is difficult. Chlamydia Psittaci From exotic birds Abrupt onset Constitutional symptoms

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

List the treatment of choice for infections caused by Chlamydia and Mycoplasma and explain the rationale behind the choice of treatment

A

Mycoplasma Tetracycline or erythromycin B-lactams do not work. Chlamydia Culture difficult IgM titter can diagnostic Doxycycline, azithromycin (again b-lactams don’t work)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

State what the environmental niches and routes of exposure are typical for Legionella and Pseudomonas.

A

Both like water, forming biofilms, and are very opportunistic infections Legionella goes after immune compromise Pseudomonas goes after any exposure - CF patients

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Compare the intracellular life styles of Legionella in nature and in the host

A

It is opsonized by a phagosome, but doesn’t bind to a lysosome. Allowing it to grow, surrounds with rough ER. Finally bursts the phagosome, than the host.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Indicate what patient factors predispose individuals to infections with these agents

A

Age Smoking Renal failure AIDS Male Alcoholism? Pseudo CF New borns

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Describe the predominant respiratory diseases associated with each agent and the other opportunistic infections that may be seen with Pseudomonas in particular

A

Pseudo Swimmers ear Pneumonia in CF Burn infections Folliculitis (after contaminated hot tub )

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Characteristics of legionella

A

Gram neg bacilli

PULMBING SYSTEMS

Leigonella Live in Lymphocytes of Lungs

Growth requirements are strict (amino acids, iron, buffered charcoal yeast) “the requirements to grow legionella are legion”

Aerosol spread

No human to human transmission

Nosocomial

Wide temperature range of replication

Diagnosis Urine sample finds LPS antigen

Bronchoalveolar lavage use silver stain

Acute and convalescent serum Treat with Macrolides (zithromycin) Quinolones (

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

Discuss the role of biofilms in disease and resistance to antimicrobial infections

A

Legionella produces strong biofilms that allow it to adhere to rough surfaces, particularly pipes,and grow. Pseudomonas Biofilms protect from antibiotics by being so adhesive

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

Basics of pseudomonas

A

Green

Found everywhere (fruits and veggies)

Antibiotic resistant (capsual, efflux pumps, biofilm)

Capsulated

Exotoxins A - like diptheria toxin

lipopolysaccharide Protein A causes gram negative toxicity

Quarum sensing

Flagellated

Biofilms

Oxidase positive

oxidize glucose, dont ferment lactose

MacConkey augur

Smells like artificial grapes

Will infect any open wound It’s capsule is very sticky. This complicates CF, burns and cancer

Treated with Specific b-lactams

20
Q

Explain the difference between dimorphic fungi and other fungi.

A

Can be either a yeast or a mold Specific geographic regions Histoplasmosis capsulatum (Mississippi and ohio rivers) Blastomycosis - Mississippi River valley, Arkansas, Kentucky. Infects dogs first. Coccidiomycosis - San Joaquin valley fever, Southern California Para coccidiomycosis - South America - oval with multiple buds

21
Q

List the causes of the most common endemic mycoses.

A

Histoplasmosis - bat guano, aerosolized soil. capsulatum - Blastomycosis - buds, Coccidiomycosis - spores break apart and release

22
Q
A

Histoplasmosis - subacute (40 million exposed) inhalation. Germination into yeast in the lungs. Taken up by macrophages but resist destruction. Distributed infection, forms slowly calcifying granule as that can reactivate decades later. capsulatum Blastomycosis - not just lungs, pancreas Coccidiomycosis

23
Q

Recognize the major clinical presentations of the most common endemic mycoses

A

Histoplasmosis - usually none. May cause pulmonary symptoms like mild pneumonia, sometimes with fever, sweat and cough / GI and headache EXACTLY LIKE TB. Can cause a mediastinitis MADE WORSE WITH TNF inhibition capsulatum Blastomycosis - skin lesions, GI infections Coccidiomycosis - 2/3 a symptomatic. A thin walled cavity in the lung is (maybe with eosinophilia) pathopneumonic. disseminates with other pulmonary disease. Para coccidiomycosis - chronic non healing muco cutaneous ulcers

24
Q

Explain the advantages and disadvantages of the diagnostic tools available for endemic mycoses

A

Histoplasmosis - culture “gold” takes 2 weeks Fungal stain (low sensitive) Antibodies (if disease is deseminated) capsulatum Blastomycosis - often by biopsy, can be cultured, Coccidiomycosis - culture, microscopy, warn the lab that it might be coccidiomycosis.

25
Q

describe the treatments for the major endemic mycoses

A

Histoplasmosis - capsulatum Blastomycosis Coccidiomycosis Intraconazole and amphoterosin

26
Q

obligate intracellular

A

Chlamydia

27
Q

Facultative intracellular

A

Taburculosis

28
Q

Viridans strep

A

Gram: positive

Shape: cocci

Cat:negative

Other: alpha heme

Sensitive: optician

Causes: Endocarditis

29
Q

Gram positive bugs

A

Cocci

Staph.

Strep.

Rods

Corynebacterium Diphtheriae

30
Q

Gram negative

A

Cocci

Rods

Pseudomonas

Haemophilus Influenza

Legionella

Chlamydia

31
Q

Staph epi

A

Gram: positive

Shape: cocci

Cat: positive

Other: coagulase negative

Sensitive: novobiocin

Causes: Endocarditis, UTI

32
Q

Staph aureus

A

Gram: positive

Shape: cocci (grapelike) - make large creamy colonies

Cat: positive

Other: coagulase positive, protein A, catalase, binds FC region of antibodies, leukocidin, Toxic Shock Syndrome

Sensitive:

Causes: Endocarditis in drug users. UTI, Renal abscess, all sorts of others.

33
Q

Strep pneumo

A

Gram: positive

Shape: cocci

Cat: negative

Other: Capsulated, alpha hemolytic, people are the only reservoir

Sensitive: optochin

Causes Lobar pneumonia, acute otitis media, chronic bronchitis.

34
Q

Vaccines

A

H. Flu B C. Diphtheria

35
Q

Histoplasmosis

A

Location: Ohio and Mississippi river valleys

Association: Histo Hides in macrophages, bat and bird guano

Other: Cold grows mold, heat grows yeast

Sensative: Fluconazole or ketoconazole for local infection. Amphotericin for systemic

Causes: Pneumonia

36
Q

Adenovirus

A

Envelope: No

Structure: DS DNA - Linear - icosahedral

Copied: In the nucleus

Other: Community aquired, camps, military

Sensative: None

Causes - Febrile Pharyngitis, Pneumonia, Conjunctivitis

37
Q

Influenza

A

Envelope: Yes
Structure: negative SS RNA 8 segments
Copied:
Other:Hemagglutinin promotes entry - neuraminidae promotes release. Bacterial superinfection can be deadley
Sensitive: Killed viral vaccine is offered each fall.
Causes:

38
Q

Coccidioides immitis - coccidioidomycosis

A

Location: Souther California

Association:

Other: Spherule

Sensative:

Causes:

39
Q

e. coli

A

Gram: -

Shape: Rod

Ferment: Lactose

..

40
Q

staph. Saprophytic us

A

Gram + Shape cocci Cat + Coagulase - Novobiocin resistant

41
Q

protease mirabilis

A

gram:”

42
Q

pseudomonas aeurginosa

A

Gram negative

Shape : rods…

Do not ferment glucose…

Non lactose ferment…

OXIDASE POSITIVE…

GREEN PIGMENT…

high environment surviveability

43
Q

enterococcus faecalis

A

blood born, penicillin resistant, vancomycin resistant,

44
Q

Corynebacterium diphtheriae

A

Gram: +

Shape: Rod

45
Q

Tubercle Bacillus

A

Gram: No effect

obligate aerobes

Requires Cellular immune response, antibodies have no effect.

Acid Fast

Ziehl Neelsen - fuchsin dye technique

One third of the worlds population is exposed, 10% of those develope disease.

Diagnosis by microscopy and culture of sputum.

Treat with RIP, Rifamipn, Isoniazid, Pyrazinamide, (use multiple drugs)

Treatment can be complex leading to low compliance and high rates of MDR TB

46
Q

Proteus Mirabilis

A

Causes UTI, particularly upper UTI

Member of the enterobacteriaceae

Swarming motility on solid agar

produces urease

Urease not only reduces pH defense, but the low pH can cause kidney stone.

47
Q

Enterococcus Faecalis

A

Gram: +

Shape: Cocci

Catalase: -

Other: non hemolytic, Grow in salt and hydrolise bile (meaning they come from the gut)