micro Flashcards
hiv drug in pregnancy
Zidovudine
fungal antigens and which fungus ?
beta-d-glucan= candida
galactomannan= aspergillus
glucuronoxylomannan= cryptococcus
which abx for lyme disease and which organim?
spirochaete = Borrelia burgdorferi
abx = doxycycline
depending on CURB 65 what abx regimen ??
0-1 (mild) Amoxicillin PO 5d 2nd line or if pen allergic-macrolide PO Outpatient treatment
2 (mod) Amoxicillin PO + Clarithromycin PO Consider admission
3-5 (severe) Co-amoxiclav IV + Clarithromycin IV Admit +/- consider ITU
remember this is for community acquired pneumonia
Treatment of Hospital-Acquired Pneumonia:
- 1st line: ciprofloxacin + vancomycin
- If severe: tazocin + vancomycin
- Aspiration pneumonia: tazocin + metronidazole
how to calc curb 65 score ?
Calculate CURB-65: 1 point for confusion, urea >7, RR >30, BP <90/60, ≥65yo
hostology for TB
· Classic histology finding: caseating granulomas
Ix for TB different types what xo you find
o CXR: upper lobe cavitation, hilar lymphadenopathy, patchy consolidation
o Sputum samples x3
Microscopy on Ziehl-Neelson stain; culture on Lowenstein-Jensen medium for 6wks → acid fast bacilli seen. Gold standard for diagnosis
Bronchoalveolar lavage if unable to produce sputum
Auramine stain can be used to screen for TB however is not diagnostic
o Tuberculin skin tests (Mantoux/Heaf): Positive result seen in active and latent infection AND previous BCG vaccination
o Hospital-acquired Common pathogens =
Pseudomonas aeruginosa, methicillin-resistant Staphylococcus aureus (MRSA) and other nonpseudomonal Gram-negative bacteria are the most common causes.
Enterobacteriaceae (most common) such as the gram negs mentioned above: e coli, kelbsiela
community acquired pneumoina most commong bugs
Strep pneumoniae (most common), Haemophilus, Mycoplasma
pneumonia
Rusty-coloured sputum. Lobar on CXR
caused by what and give microscpe
strep pnuemoniae
+ve diplococci
pnuemonia
Assoc. w/ smoking, COPD. Most common cause of bronchopneumonia
caused by what and give microscope
Haemophlius influenza
-ve cocco-bacilli
pneumonia
Assoc. w/ recent viral infection (post-influenza) ± cavitation on CXR
caused by what and give ,microscope
staph aureus
+ve cocci clusters
pneumonia
Alcoholics, DM, elderly. Upper lobe cavitating lesion
Klebsiella
-ve rod (enterobacteriae)
pneumonia + Travel with stay in hotel, air conditioning, hepatitis, hyponatraemia
how do you diagnose ?
legionella pnuemophilia
daignosed with urinary antigen test
pneumonia –> Outbreaks in young people at school or university, dry cough, arthralgia
what is it ? how to diagnose ? how to treat?
Mycoplasma pneumoniae
cold agglutinin test / AIHA, erythema multiforme.
Treated best with tetracycline or macrolide
pneumonia seen Seen in people who keep birds
Chlamydia psittaci
resp infection with people who have HIV + how to treat and what do you see on xray ?
o Pneumocystis jiroveci (PCP). Desaturation upon walking around room, bat’s wing appearance on CXR, treat with co-trimoxazole
o TB
resp infection for someone with splenectomy
encapsulated organisms = H. influenzae, S. pneumoniae
patients with neutropenia get this resp infection
o Aspergillus. Interstitial CXR changes. Halo sign on CT scan
Risk factors for infective endocarditis
- Abnormal valves: prosthetic valve, rheumatic heart disease, congenital heart disease
- Bacteraemia: long-term lines (e.g. dialysis), IVDU, poor dentition / dental abscess
- Immunosuppression
most common pathogens in infective endocarditis
- Acute (high-virulence bacteria): Strep pyogenes (Group A Strep), Staph aureus (most common in IVDU), CoNS (most common in prosthetic valve)
- Subacute (low-virulence bacteria): Staph epidermidis, Strep viridans, HACEK
o HACEK organisms are uncommon causes and do not grow on culture → consider if high suspicion but culture -ve
Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella
ix for infective endocarditiis
Investigations:
* Blood cultures - >3x from different sites, ideally before starting Abx
* Echo
signs and sx of infective endocarditis
- Fever (most common symptom, often presents as PUO)
- Non-specific Sx: anorexia, weight loss, malaise, fatigue, night sweats, SOB, clubbing
- New heart murmur, often changes day to day, usually regurgitant
- In subacute:
o Embolic phenomena: Janeway lesions, splinter haemorrhages, splenomegaly, septic abscesses in lungs/brain/spleen/kidney, microemboli
o Immune phenomena: Roth spots, Osler’s nodes, haematuria (due to glomerulonephritis)
what criteria for infective endocarditis
modified dukes criteria
Clinical criteria: (BE TIMER)
Infective endocarditis = 2 major, OR 1 major + 3 minor, OR 5 minor criteria
Major
- Blood cultures positive (>2x >12hrs apart typical organisms consistent with IE)
- Endocardial involvement evidence i.e. new murmur, vegetation on echo
Minor
- Temp > 38 (fever)
- Immune phenomena (see above)
- Microbiological evidence not meeting major criteria
- Embolic phenomena (see above)
- Risk factors
o Embolic phenomena: Janeway lesions, splinter haemorrhages, splenomegaly, septic abscesses in lungs/brain/spleen/kidney, microemboli
o Immune phenomena: Roth spots, Osler’s nodes, haematuria (due to glomerulonephritis)
tx for infective endocarditids
- IV Abx for 4-6wks (use local guidelines)
o Start empirically after cultures taken, then change according to sensitivities
o Acute: flucloxacillin
o Subacute: benzylpenicillin + gentamicin
o Prosthetic valve: vancomycin + gentamicin + rifampicin (6w) - Surgical debridement for some patients
3 types of diarhhoea and causative organisms and explain each type
- · Secretory diarrhoea
o Toxin production → Cl- secreted into lumen → loss of water and electrolytes → D+V → Watery diarrhoea, no fever
o Cholera, ETEC, EPEC, viruses - Inflammatory diarrhoea
o Inflammation and bacteraemia → Bloody diarrhoea (dysentery), fever
o CHESS: Campylobacter jejuni, EHEC, Entamoeba, non-typhoidal Salmonella, Shigella - Enteric fever
o Unwell with fever, fewer GI symptoms
o Typhoidal salmonella, Yersinia, Brucella
if nitrite negative on urine dip what does this mean for pathogenic origin of uti ?
- Staphylococcus saprophyticus: common in young females. Note: E coli still most common among young women but if in question nitrites are negative, S. saprophyticus more likely
what do ou expect to see on urine dip for people with UTI ?
· Urine dip: +ve nitrites and leukocytes
o Nitrites are quite specific for UTI – if nitrites -ve, unlikely to be UTI
o Leukocytes are not specific (also seen in STI, bladder cancer, renal stones, catheters, TB)
o Note: do NOT use urine dipsticks in people with catheters or aged over 65 over as non-pathological bacteriuria common
if squamous epithelial cells present on urine mc&s what does it mean ?
contaminatoin
alsom if its says mixed growth as well
surgical site infection
most common organism and managemetn
S. aureus (MRSA + MSSA), E. coli, Pseudomonas
Abx: fluclox for Staph
osteomyletiis
most common organiusm and management
stpah aureus
IV Abx –> flucloxacillin (clindamycin if penicillin allergic), with consideration of the addition of fusidic acid or rifampicin for the first two weeks
If meticillin-resistant staphylococcus aureus (MRSA) is suspected, vancomycin or teicoplanin is recommended
septic arthritis
most common organism and managemtn
S. aureus (most common), Strep, E. coli, N. gonorrhoea if young
IV Abx- cephalosporin or flucloxacillin
Drain joint
ix for septic arthritis
Joint aspirate – MC&S. Synovial count >50,000 cells/mm³
Blood culture
Prosthetic joint infection
most common organism and management >?
Cogulase negative staph (most common), S. aureus, E. coli
IV Abx
Remove prosthesis and revise replacement
most common cause viral meningtisi
Viral: Enterovirus (coxsackie, echovirus)- most common cause of all meningitis, mumps, HSV2m
most common cause of all meningitis ?
Enterovirus (coxsackie, echovirus)- most common cause of all meningitis
most common cause of bacterila meningitis
N. menigitidis, S pneumoniae, H. influenzae. M. Tuberculosis
pathogens for meningitis in neonates
Group B Strep, Listeria monocytogenes, E. coli