Metabolism Flashcards
Define cellular respiration
Series of catabolic processes by which CHO, fats and proteins are broken down to yield ATP through a series of redox reactions using O2 as the oxidising agent.
What are the oxidizing agents used in cellular respiration
O2 itself is too reactive to be used directly
Intermediate electron carriers are used :
- NAD+
- FAD +
What is the eponymous name for glycolysis
Embden - Meyerhof pathway
What enzymes convert glucose to glucose 6 phosphate, in which cells do these enzymes act, what hormones/factors influence these enzymes and why is glucose converted into glucose 6 phosphate within the cytoplasm
Glucokinase (hepatocytes) –> increase by insulin + decreased in starvation/diabetes
Hexokinase (all other cells) –> not increased by insulin + not decreased by starvation/diabetes
Conversion of glucose to glucose 6 phosphate in the cell maintains a concentration gradient for ongoing entry of glucose into the cell.
Conversion to glucose 6 phosphate also makes the molecule more polar and more difficult for it to diffuse out of the cell
What is the fate of glucose 6 phosphate
- To proceed to the pentose phosphate pathway (ppp)
- To proceed into the glycolysis pathway
- Proceed into glycogensis / glycogenolysis
What are the products of glycolysis from 1 molecule of glucose
2 x ATP (Net)
2 x pyruvate
2 x NADH
Does glycolysis produce CO2
No
Why does lactate accumulate under anaerobic conditions?
NAD+ is required for the conversion of Glyceraldyde 3 Phosphate to 1.3 bisphosphoglycerate.
Under aerobic conditions:
1. NADH formed during glycolysis can exchange electrons with NAD+ from within the mitochondrial matrix (as the electron transport chain is active) NAD+ is replenished and glycolysis can continue
Under anaerobic conditions
- Pyruvate is converted to lactate which converts NADH to NAD+ allowing glycolysis to continue.
- NAD+ is not available to exchange electrons with NADH made by glycolysis as the electron transport chain is not active.
This explains the accumulation of lactate in under local or systemic anaerobic conditions
What are the fates of lactate
- Pyruvate (If PaO2 restored)
- Cori cycle –> to liver –> pyruvate –> glucose (gluconeogenesis)
- Fermentation (in organisms without a liver). Lactate is converted to ethanol.
What is the Cori cycle
Lactate transported to the liver from tissues.
Converted to pyruvate and then glucose
What intermediate within the process of glycolysis affects the oxyhaemagolbin dissociation curve. How is this curve affected
1.3 bisphosphoglycerate isomerizes to 2,3 bisphosphoglycerate (2,3 BPG)
2,3 BPG shifts the P50 of the OHDC to the right reducing affinity of Hb for O2 at tissues starved of O2 (undergoing glycolysis)
How is hyperlactataemia classified
Cohen and Woods Classification
Type A
- Tissue hypoperfusion
- Anaerobic muscular activity
- Reduced O2 delivery
Type B B1 (associated with disease) - Leukaemia / lymphoma - Pancreatitis - Hepatic / Renal failure - Short bowel - Thiamine deficiency
B2 (Drugs and toxin)
- Beta agonist
- Metformin
- Alcohols
- INH
- Nitroprusside
B3 (Inborn errors metabolism)
- Pyruvate carboxylase deficiency
- Oxidative phosphorylation enzym defects
- G6PD
What is the Citric Acid Cycle? Draw it
Complex cycle of metabolic intermediates that occurs within the inner mitochondrial matrix and produces:
- Electron donors: NADH and FADH2
- CO2
- ATP
What is Pasteur’s point?
Mitochondrial oxygen tension of 0.4 kPa. Below this level, the electron transport chain ceases to operate and anaerobic generation of ATP ensues.
Where do the substrates for the citric acid cycle come from
Acetyl CoA
- Pyruvate (from glycolysis)
- Beta-oxidation
Keto-acids formed from the deamination of amino acids
Vitamin B5 required for CoA
Draw the citric acid cycle
See page 371 chambers
What is the electron transport chain
This is the final step of CHO, fate and protein catabolism. There are 5 protein complexes on the inner surface of the inner mitochondrial membrane which use electron donors: NADH and FADH2 to produce ATP.
What is the function of Complex 1, 2, 3, 4 in the electron transport chain. What co-factors are required and what occurs during this process
To pump H+ from the inner mitochondrial matrix into the inter-membrane space to establish an H+ concentration gradient.
Cofactors:
- Co-enzyme Q –> transfers electrons from complex 1 to complex 3 and from complex 2 to complex 3.
- Cytochrome C –> transfers electrons from complex 3 to complex 4
What is another name for complex 4 in the ETC and what is its unique role. Why is this complex of particular importance
Cytochrome c oxidase
–> It transfers the collected electrons to Oxygen (O2) forming water (H2O)
This is the part of the ETC that is affected by cyanide poisoning. Cyanide binds to the complex 4 haem group, preventing it from binding O2.
Describe the final complex and process of the ETC
Once a H+ gradient has been established by electron transfer between complexes 1 to 4, H+ ions flow down the concentration gradient through complex 5 or ATP synthase. During this process ATP is generated. This is called oxidative phosphorylation
What is meant by uncoupling of oxidative phosphorylation
Oxidative phosphorylation is usually coupled, that is, H+ movement across the inner mitochondrial membrane is used to generate ATP.
In brown adipose tissue, pores can be opened that allow H+ to move into the inner mitochondrial matric without passing through ATP synthase (complex 5). This is called uncoupling, where oxidation and phosphorylation ar no longer strictly matched. The energy released during H+ movement generates heat instead of ATP. This is an important mechanism of thermogenesis in neonates
How many molecules of ATP are created by NADH versus FADH2
NADH –> 3 ATP
FADH –> 1 ATP
How much ATP is generated from a molecule of glucose during aerobic and anaerobic metabolism?
1 molecule of glucose makes:
Anaerobic = 2 ATP
Aerobic = 36 ATP
What is meant by “fats have a high energy value”
They produce more than twice the amount of ATP than equivalent masses of CHO or protein.
Summarise the events that take place during beta-oxidation
Takes place in the inner mitochondrial matrix.
Catabolism of fatty acids that involves removing successive two-carbon units from the fatty acid, each event producing one molecule of acetyl CoA which enters the citric acid cycle.
How are free fatty acids stored. Describe the structure of this molecule
Triglyceride. Three fatty acids esterified with glycerol. When needed triglycerides are hydrolysed by lipases to regenerate free fatty acids and glycerol
The fatty acids undergo beta oxidation, what happens to the glycerol molecule
Hepatocytes transform glycerol into glucose during gluconeogenesis
How do short, medium and long chain fatty acids enter the inner matrix of the mitochondria for beta oxidation to take place
Short and medium fatty acids –> small enough to enter on their own
Long chain fatty acids require the carnitine shuffle. –> i.e. are bound to a carrier in order to cross the mitochondrial membrane.
Name the three common ketone bodies and how and when are these formed
When carbohydrates are scarce (e.g. starvation) or are unable to enter the cell (diabetic ketoacidosis), beta oxidation becomes the main source of energy.
This results in high mitochondrial Acetyl CoA concentration and the following ketone bodies are formed by condensation of two molecules of acetyl CoA.
- Acetone
- Acetoacetic acid
- Beta-hydroxybutyric acid
In times of starvation how do the liver, heart and brain respond to high ketone bodies
Liver –> converts them back into Acetyl CoA and then back into Kreb’s cycle
Heart –> Favours fatty acids as its energy source but can use ketone bodies in times of starvation
Brain –> does not normally metabolize fatty acids. Usually entirely dependent on glucose for ATP. But the brain can adapt to using ketone bodies during times of starvation. (70% of metabolic demands max)
Can RBC’s use ketone bodies as an energy source? why
No. RBCs do not have mitochondria and rely 100% on glycolysis for ATP.
Describe the products of the beta oxidation of a 12 Carbon fatty acid
6 x Acetyl CoA –> Citric acid cycle
7 x NADH ———–> ETC
7 x FADH2 ———–> ETC
All converted into approximately 100 ATPs