Genetics and Ageing Flashcards
What is a chromosome and how does it differ from chromatin
Chromatin is compacted into chromosomes during mitosis and meiosis forming 22 pairs of autosomes and 1 pair of allosomes. Chromatin is made up of compacted DNA wrapped around histone proteins.
Classify the four nucleobases and define how this nucleobases are paired in DNA
Pyrimidines (CuT Pie or ‘py’)
Cytosine
Thymine
Purines (Pure gold - ‘Ag’ periodic table)
Adenine
Guanine
Pairing
AT
CG
Define DNA
Deoxyribonucleic acid or DNA is a polymer of 4 nucleotides in sequence bound to a complementary DNA strand and folded into a double helix. The strands run antiparallel 5’ to 3’.
Simplify the structure of DNA and differentiate nucleotide from nucleoside from nucleobase
Posphate - Pentose Sugar - Nucleobase - hydrogen bond - Nucleobase (complementary) - Pentose sugar - Phosphate.
Sugar phosphate backbone attached to nucleobases.
Nucleobase = CTAG Nucleoside = nucleobase + Pentose sugar Nucleotide = nucleobase + Pentose sugar + PO4
Which pathway forms the sugars found in DNA
The pentose phosphate pathway
What is RNA
The amino acid sequence of protein is encoded by the DNA sequence in the cell nucleus. When the cell needs to synthesize protein, the code is anchored in the cell nucleus, and protein manufacturing apparatus (ER/Golgi) is located within the cytoplasm. RNA is produced as a copy of DNA genetic code in the nucleus and exported to the cytoplasm, where it is used to synthesize protein.
List the differences between RNA and DNA
RNA - extra hydroxyl group on sugars (hence ‘deoxy’)
RNA - has Uracil instead of thymine
RNA - single strand - no antiparallel strand to form double helix
What are the 3 types of RNA and what is their function?
messenger - mRNA - produced by transcription in nucleus and then transferred to ER for use in protein synthesis
transfer tRNA - 20 types gather 20 aa’s in cytoplasm and transfer to ribosome for protein synthesis
ribosomal rRNA - Aligns tRNA units in their correct positions along the mRNA sequence
The amino acids are joined together and a complete protein released.
Define a codon
Triplet of nucleosides that encodes for an individual amino acid - e.g. GCA represents aa alanine
mRNA - codons
tRNA - anticodons
Jigsaw match
Give three examples of errors may occur during DNA replication/repair. Which of these has to most significant effect on changing protein synthesis and why?
- Point mutation
- Deletion
- Insertions
Deletions and insertions are the worst because “frame shift’ can occur with the ensuing DNA encoding a significantly different protein
Describe the gene mutation in sickle cell disease and how this mutation leads to the the ‘sickling’ of red blood cells
Chromosome 11
Point mutation in the DNA code for the beta chain of Hb
GAG (Glutamic acid) is changed to GTG (Valine)
Glutamic acid - polar
Valine - non-polar
This causes aggregation of Hb and thus shape change of the erythrocyte under conditions of low O2 tension.
Describe the genetic defect in cystic fibrosis and how this manifests clinically
Chromosome 7
> 1000 point mutations described of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) gene –> encodes a transmembrane Cl- channel
Most common is delta F508 mutation
–> deletion of 3 nucleotides (an entire codon which codes for phenylalanine, F) at the 508th position.
Thickened secretions that prevent clearance by ciliated epithelium resulting in blockages of:
- Small airways (pneumonia)
- Pancreatic ducts (malnutrition)
- Vas deferens (incomplete development and infertility)
Describe the genetic defects in Huntingdon’s disease
Chromosome 4
Insertion of repeated segments of DNA
Codon for glutamine (CAG) is repeated multiple times within the Huntingdon gene on chromosome 4 = trinucleoside repeat disorder
What is haploid and diploid
haploid - cell containing 23 chromosomes (gametes)
diploid - cell containing 46 chromosomes (human cells)
What is an allele
A gene that codes for a specific trait e.g.blue alleles and brown eye alleles. (Mendelian).
Give 3 examples of autosomal dominant diseases
- Hypertrophic cardiomyopathy
- Polycystic kidney disease
- Myotonic dystrophy
- Malignant hyperthermia
Give 3 examples of autosomal recessive diseases
- Sickle cell disease
- Wilson’s disease
- Cystic fibrosis
Give 3 examples of X-linked recessive diseases
- Haemophilia A
- Duchenne muscular dystrophy
- Red-green colour blindness
Define functional reserve
The difference between maximum and basal levels of function - safety margin for trauma/disease/surgery/healing
What are the hypothesized mechanisms of aging
- Stochastic -> dependent on time and probability - due to random errors in protein synthesis
- Non - stochastic -> “biological clock for each species dependent on neuroendocrine or immune mechanisms
Progressive imbalance between oxidative stress and metabolic protection of oxidative stress –> increased ROS –> damaged membranes/proteins/DNA –> decreased antioxidant scavenging capacity –> progressive cycle –> decreased bioenergetic capacity –> loss of functional reserve –> susceptibility to disease and infection –>Increased probability of death
What happens to the heart with age
- Decreased myocytes
- Decreased conduction fibre density
- Decreased sinus node number
- LV wall thickening
- Interstitial fibrosis
Systolic dysfunction (reduced contractility) Diastolic dysfunction (reduced compliance)
Why is sinus rhythm vital in aged patients
Reduced LV compliance –> decreased earl diastolic filling with compensatory increase in late diastolic filling of LV to maintain EDV and SV –> therefore strong reliance on LA filling of LV in the aged.
How does cardiac output change with age
An 80 year old has 50% CO at aged 80 (vs CO at 30 yrs)
How is the vasculature affected by age
Arteriosclerosis –> AAA/Carotid artery stenosis etc.
How is the autonomic nervous system affected by age?
SNS - beta receptors less sensitive –> 2% loss of HR response during dynamic exercise.
PSNS - Reduced vagal tone –> therefore can’t reduce vagal tone below an already reduced baseline.
What happens to elastic recoil of the lungs and chest wall compliance with age –> how does this affect the pressure volume curve
Elastic recoil decreases –> increased static compliance
Chest wall compliance decreases
Pressure-volume curve shifts to the left. Lest change in pressure required for same volume change.
What happens to static lung compliance with age?
Increases
What happens to dynamic lung compliance with age?
Becomes more frequency dependent
How does residual volume change with age
Increases by 10% per decade after 50
How is vital capacity changed by increasing age?
Decreases
How does closing volume change with age
Increases
How does FEV1 change with age and why
Chest will stiffens with age - calcification of costo-chondral cartilage/costo-vertebral joints and progressive weakening of the auxiliary musculature of ventilation —> decreased FEV 1 and increased WOB
Describe the changes to the pulmonary vasculature that occur with aging
Decreased cross-sectional area of pulmonary capillary bed –> increased PVR –> higher pulmonary artery pressure.
Hypoxic pulmonary vasoconstriction is blunted in the elderly which may cause difficulty with one lung ventilation.
What happens to mean PaO2 with age and why?
PaO2 = 102 - (0.498 x Age)
- CC encroaches FRC
- Closing volume is more –> V/Q mismatch
- Deteriorating parenchymal integrity –> decrease surface area –> increased (A - a)dO2.
- Decreased sensitivity of respiratory centres to hypoxia and hypercapnoea –> diminshed or delayed response to injury