M&R Flashcards
Constituents of membranes
40% lipid, 60% protein, 1-10% carbohydrate
5 Function of Biological Membranes
- Continuous, highly selective permeability barrier
- Allows control of the enclosed chemical environment
- Communication - control flow of info between cells and environment
- Recognition - signalling molecules, adhesion proteins, immune surveillance
- Signal generation in response to stimuli
What makes up a phospholipid?
Glycerol, 2 fatty acids and a phosphate head
Examples of polar heads of a phospholipid
Choline, amine, AA’s
Effects of having a cis double bond kink in a fatty acid of a phospholipid
Reduces phospholipid packing, allowing fluidity
What are the 2 types of GLYCOLIPID?
- Head group is a sugar monomer = Cerebroside
- Head group is an oligosaccharide = Ganglioside
4 Possible types of movement of a membrane bliayer
Flexion, Rotation, Lateral Diffusion, Flip-Flop (movement of lipids from one half of the bilayer to the other)
Properties of cholesterol
Rigid, planar steroid ring structure, with a polar head.
Effects of cholesterol on phospholipids at high and low temperature
High temp: reduced phospholipid chain motion: reduced fluidity.
Low temp: reduced phospholipid packing: increased fluidity.
What evidence is there for the presence of proteins in membranes?
They serve functions, e.g. facillitated diffusion, ion gradients etc. There is also biochemical evidence proven by freeze fracture of the membranes and also via SDS-PAGE of the membrane.
Which movements are possible for proteins in a bilayer?
Conformational change (e.g. opening/closure of channels), Rotation and Lateral. NO FLIP-FLOP (as energy required is too high and would disrupt the bilayer structure)
What are peripheral membrane proteins? How can they be removed?
Proteins bound to the surface by electrostatic/hydrogen bond interactions. They can be removed by pH/ionic strength change.
What are integral membrane proteins? How can they be removed?
They are proteins that interact extensively with hydrophobic domains of the lipid bilayer. They can be removed via agents that compete for non-polar interactions e.g. detergents.
What do hydropathy plots measure?
They measure the hydrophobicity of AA’s of a protein. If >1 hydrophobic region then there is >1 transmembrane domain, so the protein may fold in and out of the bilayer.
Topology?
The orientation of a protein within the bilayer. This is important as the recognition site must be facing the correct direction (intracellularly or extracellularly).
Erythrocyte membrane analysis
- Prepare ghost membranes via osmotic haemolysis. Then analyse membrane by gel electrophoresis.
- Peripheral proteins are removed by a salt wash. Hence these proteins must be on the cytoplasmic face as they are susceptible to proteolysis when only this face is susceptible.
- Integral proteins are removed only via detergents.
Properties of the erythrocyte cytoskeleton
- Composed of a network of spectrin and actin molecules.
- alpha and beta spectrin units wind to form an alpha-2-beta-2-heterotetramer.
- These rods are cross-linked into networks actin proto-filaments, and band 4.1 and adducin molecules form interactions towards the ends of the rods.
- This is attached to the membrane via adapter proteins e.g. Ankyrin, ensuring restricted lateral mobility of membrane proteins.
What are the 2 types of haemolytic anaemias?
- Hereditary Spherocytosis - depleted spectrin, so cells round up, and are less resistant to lyse, so are cleared by the spleen.
- Hereditary Elliptocytosis - Spectrin defect so heterotetramers cannot form, giving fragile elliptoid cells (rugby ball shaped RBC’s)
What are the stages of membrane protein biosynthesis?
- Translation of the protein is halted and the hydrophobic AA sequence at the N-terminus is recognised by a signal recognition particle (SRP). Binding to this is what prevents the continuation of protein synthesis.
- The SRP is recognised by a SRP receptor (docking protein). The SRP is then released.
- The signal sequence interacts with the signal sequence receptor (SSR which is in a protein translocator complex) in the ER membrane, directing protein synthesis to continue into the ER.
- The stop transfer signal spans the bilayer, and this forms the transmembranous region.
- The membrane protein is released from the protein translocator into the bilayer.
- The N-terminal signal sequence is directed into the lumen, C-terminal sequence into the cytoplasm.
- Signal sequence cleaved by signal peptidase.
Where does further post-translational processing occur?
ER and Golgi
Molecules that lipid bilayers are permeable to
Hydrophobic/ small uncharged polar molecules.
E.g. h2o, O2, CO2, Urea, glycerol
Molecules that lipid bilayers are not permeable to
Ions/ large uncharged polar molecules.
E.g. Glucose, H+, Na+, Ca2+, Cl- etc.
Properties that transport processes need to maintain include
Ion conc. Intracellular pH. Cell volume.
How do ligand-gated ion channels work?
Ligand binds to receptor, causing conformational change that opens the channel.
E.g. ATP-sensitive K+ channel. ATP conc. high in cell, and stops the outward flow of potassium ions from cell.
How do voltage-gated ion channels work?
Voltage sensor detects membrane depolarisation. Causing conformational change. The inside is normally more negative than the outside.
What two properties allow passive movement of ions across a membrane?
Down concentration gradient, and membrane potential in favour of movement of the ion.
What are the Intracellular and extracellular concentrations of Na+?
Intracellular = 12mM Extracellular = 145mM
What are the Intracellular and extracellular concentrations of Cl-?
Intracellular = 4.2mM Extracellular = 123mM
What are the Intracellular and extracellular concentrations of Ca2+?
Intracellular = 0.0001mM Extracellular = 1.5mM
What are the Intracellular and extracellular concentrations of K+?
Intracellular = 155mM Extracellular = 4mM
What are primary active transporters? Give an example.
They hydrolyse ATP directly to move molecules across bilayer.
E.g. PMCA Hydrolyses ATP to pump Ca2+ outside cell, against gradient.
What is the difference between uniport, symport and antiport?
Uniport transports one ion type across Bilayer at a time.
Symport cotransports two different ions together in the same direction.
Antiport cotransports two different ions together in opposite directions.
What is the role of Na+/K+ -ATPase?
Hydrolyses ATP to move 3 Na+ out and 2 K+ into the cell. (An antiport - primary active transporter). This generates an inwards Na+ gradient and an outwards K+ gradient.
The alpha subunit Hydrolyses ATP and moves the ions.
The beta subunit directs the pump from ER to plasma membrane.
Which ion gradient is mainly responsible for the membrane potential?
K+
What is the role of the Na+ Ca2+ exchanger?
Uses the inward Na+ gradient to drive one Ca2+ out for every 3Na+ into the cell.
Low affinity (so only removes calcium when levels are raised), high capacity.
What is the role of the Na+ H+ exchanger?
Uses the Na+ gradient to export 1 H+ out for every Na+ into the cell. This maintains pH.
What is the role of the Na+ Glucose co-transporter?
It uses the Na+ gradient to drive glucose from gut lumen into the cell.
What is the role of the CFTR protein?
It’s a chloride transporter that transports chloride from epithelial cells outside of the cell. Drawing water with it to hydrate mucus.
What is the connection between protein kinase A and diarrhoea?
If protein kinase is activated, Cl- transport through the CFTR channel is enhanced. Drawing more water into the gut lumen,therefore causing diarrhoea.
Why is it important to maintain a low concentration of Ca2+ inside the cell?
High concentration is toxic to cells as it binds with phosphate and causes ossification of cells. Small changes are used for signalling.
What is the role of PMCA (Ca2+ - ATPase)?
Removes Ca2+ even when it’s concentration is low.
What is the role of SERCA (sarcoendoplasmic reticulum - ATPase)?
Drives Ca2+ into the ER store
What controls cell pH?
Acid Extruders.
NHE (Na+H+ exchangers) exports H+ from cell and imports Na+.
NBC (Sodium bicarbonate cotransporter) exports Cl- and imports HCO3-.
Base Extruders.
Cl-/HCO3- exchanger (AE) uses chloride gradient to drive out HCO3-.
What happens if pH starts to fall/increase?
FALL IN pH: NHE increases activity, excluding H+ ions.
INCREASE IN pH: AE activated, decreasing pH.
How is cell volume regulated?
Via transport of osmotically active ions, e.g. Na+, Cl-, K+. So that water will follow. If cell is swelling, extrude ions so that water follows. If cell is shrinking, induce an influx of ions.
Name two mechanisms to resist cell swelling
Use K+/Cl- channels.
Extrude amino acids.
K+/Cl- co-transporter to remove these ions so water will follow.
Describe Na+ reuptake via the thick ascending limb of the kidney
The Na+K+2Cl- cotransporter transports sodium, potassium and chloride ions out of the filtrate to the cell. The Na+ then enters the bloodstream via Na+K+ATPase. K+ and Cl- also enter the blood.
ROMK involve potassium channels to allow it to leak from cell to filtrate.
LOOP DIURETICS (renal hypertensive therapy) inhibit Na+K+Cl- so that Na+ is lost in the urine. Therefore water leaves blood thus reducing blood pressure.
How is a resting potential set up?
Potassium ions leave via ion channels down their concentration gradient. The anions are left behind, hence the potential is more negative on the inside of the membrane.
When the outwards chemical K+ gradient is equal to the inwards electrical K+ gradient, there will be no net movement of k+.
Which equation can be used to establish the membrane potential at which an ion will be in equilibrium?
The Nernst Equation
What is approximately the electrochemical equilibrium for k+?
-95mV