Lectures 29/30: Integration of Metabolism Flashcards

1
Q

Location of pyruvate transporter

A

Mitochondrial membrane

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2
Q

Location of cartinite/acyl carnitine transporter

A

Mitochondrial membrane

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3
Q

Location of citrate transporter

A

Mitochondrial membrane

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4
Q

Location of aspartate transporter

A

Mitochondrial membrane

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5
Q

Location of malate transporter

A

Mitochondrial membrane

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6
Q

Location of adenine nucleotide translocase

A

Mitochondrial membrane

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7
Q

Location of P-H symport proteins

A

Mitochondrial membrane

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8
Q

Location of citrulline transporter

A

Mitochondrial membrane

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9
Q

Location of ornithine transporter

A

Mitochondrial membrane

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10
Q

Location of citric acid cycle

A

Mitochondrial matrix

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11
Q

Location of oxidative phosphorylation

A

Mitochondrial matrix

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12
Q

Location of beta-oxidation

A

Mitochondrial matrix

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13
Q

Location of ketogenesis

A

Mitochondrial matrix

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14
Q

Location of amino acid synthesis and degradation

A

Mitochondrial matrix and cytosol

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15
Q

Location of urea cycle

A

Mitochondrial matrix and cytosol

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16
Q

Location of glycolysis

A

Cytosol

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17
Q

Location of gluconeogenesis

A

Cytosol

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18
Q

Location of pentose phosphate pathway

A

Cytosol

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19
Q

Location of fatty acid synthesis

A

Cytosol

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20
Q

Location of nucleotide synthesis

A

Cytosol

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21
Q

Metabolic control through compartmentation

A

Transport can control the activity of pathways
Transport is not always direct: converted
In general: synthetic pathways are cytosolic and oxidative pathways are in mitochondria (glycolysis and gluconeogenesis are exceptions as they share enzymes and are both mostly cytosolic)

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22
Q

Mitochondrial steps of gluconeogenesis

A

Pyruvate converted into oxaloacetate by pyruvate carboxylase: occurs in mitochondria
Oxaloacetate must leave mitochondria: indirectly transported into cytosol as malate using the malate transporter to enter glyconeogenesis

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23
Q

Malate transporter

A

Transports oxaloacetate in form of malate from mitochondrial matrix to cytosol, where it is oxidized to oxaloacetate

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24
Q

Malate dehydrogenase

A

Converts oxaloacetate to malate to be transported via malate transporter to cytosol to be used in gluconeogenesis

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25
Alcohol intoxication and hypoglycemia
Ethanol is metabolized in cytosol to acetyl-CoA, generating NADH Malate dehyrodgenase reaction is prevented from proceeding from matte and NAD+ to oxaloacetate and NADH: inhibition of gluconeogenesis in the liver When this occurs in fasting period, blood glucose levels can drop leading to hypoglycaemia and unconsciousness
26
Maintenance of cellular homeostasis
1. Regulation of energy levels in the cell (ATP, AMP) 2. Regulation to avoid build-up or scarcity of metabolites: regulation through allosteric effectors and substrate availability
27
Maintenance of homeostasis in whole organism
Coordination of metabolism in different cell types/different tissues regarding energy and metabolite levels Regulation through hormone signalling leading to changes in enzyme activity through covalent modification and changes in expression 1. Each tissue must recieve suffice energy in a form it can use 2. Build up of metabolites in body must be prevented 3. Xenobiotics must be degraded
28
Fatty acids
Highest caloric value per carbon Most abundant stored energy in human body (triacylglycerol) Last longest during fasting periods No fatty acid oxidation in absence of oxygen or mitochondria No fatty acid oxidation i brain Cannot be converted to glucose
29
Glucose
``` Used by all tissues Limited storage in form of glycogen Can generate ATP even when oxygen is low Precursor for all other metabolites Also needed in pentose phosphate pathway ```
30
Amino acids
Glycogenic amino acids are nearly as versatile as glucose | Most amino acid storage is in muscle protein, not beneficial to break this down
31
Metabolic goal of fed state
Remove glucose form blood | Store energy for later
32
Metabolic goal of post-absorptive state
Provide glucose to the tissues that need glucose | Provide energy to other issues, maintain glucose levels in blood
33
Metabolic goal of fasting
Provide glucose to the tissues that need glucose Provide energy to other issues, maintain glucose levels in blood Reduce glucose requirements as much as possible
34
Metabolic goal of exercise
Provide energy to muscle | Increase oxygen supply to muscle
35
Metabolites secreted by adipose tissue
Fatty acids and glycerol
36
Metabolites secreted by muscle
Lactate and amino acids
37
Metabolites secreted by liver
Glucose, ketone bodies, lipoproteins
38
Metabolites secreted by brain
None
39
Brain
``` Virtually no energy storage No fatty acid oxidation Glucose is obligatory fuel No secretion of energy metabolites Ketone bodies used when present ```
40
Heart
Virtually no energy storage Fatty acids or glucose used No secretion of energy metabolites Ketone bodies used when present
41
Ketone bodies as fuel
Ketone bodies only cover 70% of what brain needs, brain will still need glucose
42
Adipose tissue in fed state
Uptake of glucose and fatty acids Synthesis of TG Removal of blood glucose after a meal Storage of energy for later
43
Adipose tissue in fasted state
Lipolysis of TG Secretion of fatty acids and glycerol Provision of energy during fasting
44
Skeletal muscle in fed state
Glucose uptake, storage as glycogen | Amino acid uptake for protein synthesis
45
Skeletal muscle in fasting/starvation
Protein breakdown Amino acids (as alanine) to liver At rest: fatty acid oxidation Ketone bodies used if present
46
Skeletal muscle in active sate
Glycogenolysis Anaerobic glycolysis Secretion of lactate Fatty acid oxidation if sufficient oxygen
47
Kidney
Some gluconeogenesis Glutamine breakdown and excretion of ammonium Excretion (NOT production) of urea
48
Liver in fed state
Glycogen synthesis and storage, but glucose uptake is not unregulated Glycolysis Fatty acid synthesis from excess acetyl-CoA Triacylglycerol synthesis and secretion as VLDL
49
Liver in fasted state
Glycogenolysis Secretion of glucose Gluconeogenesis Ketogenesis (when fasting is prolonged VLDL secretion to provide triacylglycerols/fatty acids and cholesterol to heart and skeletal muscle Urea cycle (also active when lost of amino acids are degraded)
50
Liver failure
Can lead to hypoglycaemia during fasting due to insufficient gluconeogenesis and increased ammonium levels
51
Cori cycle
Transport of lactate from muscle to liver where it is converted to pyruvate and then glucose and released
52
Glucose-alanine cycle
Pyruvate is produced by muscle glycolysis Pyruvate is transaminate to make alanine Alanine is transported from muscle to the liver where ammonium is released to urea cycle and pyruvate is used to make glucose
53
Hormones
Convey short and long-range signals Can be polypeptides, amino acid derivatives, steroids Signalling through specific receptors: maintenance of homeostasis, integration across organism Response to external stimuli Follow cyclic programs: sleep/wake, menstrual Signalling: bind receptor, mediate response, terminate signal
54
Signal transduction
Ligand binds receptor Intracellular signal propagation: activation of enzymes, formation of second messengers, secondary activation enzymes, protein translocation Causes: cytoskeleton rearrangement, enzyme modification, gene expression changes
55
Ionotropic receptors
Ion channels | Neurotransmitters
56
G-protein coupled receptors
Over 800 Catecholamines Glucagon Vision, taste, smell
57
Cytokine receptors
Cytokines: inflammatory molecules
58
Receptor tyrosine kinases
Insulin | Growth factors
59
Nuclear hormone receptors
Membrane-permeable ligands Steroids Thyroid hormones Vitamins A, D
60
Insulin
Reduces blood glucose and builds energy stores (anabolic) Polypeptide hormone made in pancreatic beta cells: secretion trigged by metabolism of glucose and ATP production because of glucose oxidation Upregulation of glucose uptake in muscle and adipose Increased glycolysis Increased fatty acid uptake into adipose Increased glycogen synthesis, fatty acid synthesis and protein synthesis
61
Glucagon
Increases blood glucose and mobilizes energy stores (catabolic) Polypeptide made in pancreatic alpha cells Increased gluconeogenesis in liver Increased glycogenolysis, lipolysis, fatty acid oxidation, proteolysis Does not act on muscle cells
62
Catecholamines
Mobilize energy for muscle activity "Fight or flight" response Amino acid derivatives Increased gluconeogenesis in liver Increased glycogenolysis, lipolysis, fatty acid oxidation and proteolysis
63
Pancreatic islets
Produce insulin and glucagon | Pancreas in an endocrine organ and an exocrine organ
64
Regulation of insulin and glucagon secretion
Insulin levels rise quickly after a meal and glucagon levels decrease quickly after a meal Glucose stimulates insulin secretion Glucose and insulin inhibit glucagon secretion
65
Beta cells
Produce insulin Pancreas Contain glucokinase (also in liver): isoform of hexokinase
66
Glucokinase
In liver and beta cells of pancreas Isoform of hexokinase Acts as glucose sensor: activity is dependent on glucose concentration over a wide range Does not react with other monosaccharides ie. fructose does not cause insulin secretion
67
Insulin action on muscle
Promote glucose transport into cells Stimulates glycogen synthesis Suppresses glycogen breakdown
68
Insulin action on adipose tissue
Activates extracellular lipoprotein lipase Increases level of acetyl-CoA carboxylase Stimulates triacylglycerol synthesis Suppresses lipolysis
69
Insulin action on liver
Promotes glycogen synthesis Promotes triacylglycerol synthesis Suppressed gluconeogenesis
70
GLUT transporters
Takes up glucose
71
GLUT4
Only GLUT transporter unregulated by insulin In muscle and adipose Expression and localization regulated by insulin: causes translocation into membrane Other isoforms are present in liver, pancreatic cells, brain, but are not regulated by insulin
72
Lipoprotein lipase
Activated by insulin causing increased uptake of fatty acids Storage of dietary or liver-derived fat in adipocytes by hydrolysis of TG into lipoproteins and uptake of fatty acids for resynthesis to TG Fatty acids are activated wth CoA to be esterified with glycerol-3-phoshate
73
Glycogen synthase
Glycogen synthesis pathway Upregulated by insulin Down regulated by glucagon
74
Acetyl-CoA carboxylase
Fatty acid synthesis pathway Upregulated by insulin Down regulated by glucagon Inactive by phosphorylation
75
HMG-CoA reductaste
Glycogenolysis pathway Down regulated by insulin Upregulated by glucagon Inactive by phosphorylation
76
Hormone sensitive lipase
Adipocyte lipolysis pathway Down regulated by insulin Upregulated by glucagon Activated by phosphorylation
77
Phosphofructokinase 2
Glycolysis pathway Upregulated by insulin and down regulated by glucagon Inactive by phosphorylation
78
Insulin receptor
Receptor tyrosine kinase | Insulin signalling activates several phosphatases
79
Glucagon receptor
GPCR 1. Binding 2. Activation of receptor 3. Activation of G protein 4. Activation of adenylate cyclase 5. Production of cAMP 6. Activation of PKA 7. Downstream activation of other protein kinases
80
Glycogen phosphorylase
Activated by phosphorylation by phosphorylase kinase: promoted by glucagon and EN signalling Deactivated by phosphoprotein kinase, which is promoted by insulin
81
Kinases
Inhibited by insulin
82
Phosphatases
Activated by insulin
83
Type 1 Diabetes
Destruction of beta cells: total loss of insulin production Beta cell destruction is often autoimmune response Treatment by giving insulin Untreated Type 1: ketoacidosis can develop
84
Type 2 Diabetes
Insulin signalling is less sensitive than normal, causing insulin resistance Insulin levels are normal or even increased Strongly linked to obesity Can be treated with some oral drugs that increase insulin sensitivity and lifestyle changes AMPK activators promote insulin sensitivity
85
Longterm effects of hyperglycaemia
Nerve and kidney damage Risk of cataract formation Possible mechanisms: glucose can react with proteins, protein modification impairs function Glucose converted to sorbitol when glucose concentrations are very high: increases osmotic pressure
86
Lipid metabolism with diabetes
Increased circulating triacylglycerol levels: lipoprotein lipase is not activated Increased fatty acid levels linked to cardiovascular disease
87
Obesity
Caused by long-term positive energy balance Caused by inheritance and lifestyle Genetics, environment, epigenetics/microbiome
88
Genetics and obesity
``` Leptin Leptin receptor Melanocortin receptor Neuropeptide Y receptor Uncoupling protein Susceptibility genes ```
89
Environment and obesity
Availability of food High-calorie food Larger portion size Lack of physical activity
90
Epigenetics and obesity
Micro biome and perinatal influences
91
Leptin
Hormone secreted from adipose tissue to regulate long-term energy storage Signals satiety Deficiency or impaired signalling can cause obesity: human obesity is often associated with leptin resistance
92
Adiponectin
Hormone secreted from adipose tissue to regulate long-term energy storage Activated AMPK to promote fuel catabolism
93
Characteristics of cancer cells
1. Uncontrolled growth: high proliferation, high need for synthesis of DNA, lipids, proteins 2. Growth without attachment: metastasis, growth of solid tutors instead of monolayers, inside of tumour can become hypoxic 3. Growth without external growth factors: changes in signal transduction, mutations, escaping normal regulation mechanisms 4. Dedifferentiation: support of unlimited growth
94
Positron Emission Tomography Imaging
PET visualized the body metabolic activity following injection of 2-deoxy-2-fluoroglucose (fluorodeoxyglucose) Deoxyglucose is phosphorylated by hexokinase but not further protein down, and accumulates in cell Dark areas indicate tissues that take up a lot of glucose
95
Warburg Effect
1920s Cancer cells generate high levels of ATP through glycolysis and lactate production even when sufficient oxygen is present Mitochondria in cancer cells are dysfunctional: not generally confirmed Later research confirmed that most cancer cells have very high rates of glycolysis even in presence of oxygen: various reasons
96
Metabolic needs of highly proliferating cells
More ATP production, synthesis of lipids, nucleotides and proteins High requirement of NADPH and antioxidants Metabolic adaptations in different cancers are highly diverse and depend on original cell type
97
Glycolysis in cancer cels
Less efficient way to generate ATP, but occurs even in presence of oxygen Glycolytic intermediates and pyruvate are diverted into biosynthesis reactions
98
Glutamine
Major fuel after glucose for cancer cells Anapldrotic reaction to glutamate and alpha-ketoglutarate Can be fully oxidized when malic enzyme is active
99
Glucose uptake or hexokinae inhibitors
Affect cancer cells more than normal cells
100
PKM2 activators
Decreased use of glycolytic intermediates in synthesis | Some cancer cells become dependent on extracellular serine when PKM2 is activated
101
Dichloroacetate
Inhibits pyruvate dehydrogenase kinase | Activated pyruvate dehydrogenase: pyruvate is oxidized an not used in synthetic reactions
102
Glutaminase inhibitors
Targeting glutamine addiction of cancer cells