Lecture 35 - HIV/AIDS Flashcards

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1
Q

Outline the HIV epidemic

A
  • First case 1959
  • Epidemic in late 80’s
  • Endemic in Sub-Saharan Africa
  • 1992-95: most common cause of death in young people is the US
  • Economic
    • ​Retards economic growth
    • Exacerbates poverty
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2
Q

Outline the phylogeny of HIV

A
  • Two major categories
    • ​HIV-1
      • ​Group M
        • ​Clades A-K
      • Group N
      • Group O
      • Group P
    • HIV-2​
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3
Q

Describe the features of the HIV virion

A
  • Lentivirus
    • ​Slowly replicating
  • Retrovirus
    • ​RNA genome reverse transcribed into DNA
  • Genome
    • LTR
    • ​Gag
      • ​MA, CA
    • Pol
      • ​Polymerases: RT, IN, PR
    • Env
      • gp120
      • gp41
  • Structure
    • ​Envelope
      • ​gp120/gp41
    • Nucleocapsid
    • RNA genome
    • Enzymes
      • ​Integrase
      • Reverse transcriptase
      • Protease
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4
Q

Polio vaccine and HIV transmission?

A
  • There was some thought that HIV was transmitted from Chimpanzees to humans through contaminated polio vaccine
  • This has been shown to be false
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5
Q

Describe the clinical manisfestations of HIV infection

A
  • ​Flu-like illness
    • ​1-2 weeks after infection
    • Sometimes asymptomatic
  • ​⇒ seroconversion
  • Clinical latency
    • ​Slow depletion of CD4+ T cells
  • AIDS
    • ​<200 CD4 T cells / ml blood
    • Opportunistic infections
      • ​Candida
      • Pneumocystic carinii
      • Mycobacterium avium
      • CMV
      • Herpes simplex
      • Varicella
    • Kaposi sarcoma
    • B cell lymphomas (EBV)
    • Dementia
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6
Q

Describe the HIV replicative cycle & invasion of cells

A
  1. gp120 binds to CD4 on CD4+ T cells
  2. Conformational change in gp120: exposure of co-receptor binding site
  3. CCR5/CXCR4 (coreceptor) binds exposed co-receptor binding site
  4. Fusion of HIV envelope with CD4 T cell membrane
  5. Uncoating of nucleocapsid
  6. Reverse transcription of RNA into ds cDNA
  7. Viral cDNA enters nucleus
  8. LTR-dependent integration of cDNA into host genome
  9. T cell activation → Transcription of pro-viral genes
    • ​​NFKB dependent
  10. Multiple splicing of viral mRNA
  11. Translation of Tat and Rev
  12. Tat amplifies transcription of viral RNA
  13. Rev increases transport of singly spliced RNA
  14. Translation of other viral proteins
    • ​​gp160
    • Pol
    • Gag
  15. Assembly of virus
  16. Virions bud out of the cell
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7
Q

Describe the expression of CCR5 and CXCR4

A
  • CCR5
    • Major co-receptor
    • ​Expressed on effector and memory CD4 T cells
      • ie those cells that are enriched at mucosal sites
    • Binds RANTES and MIP-1a
      • ​on Macrophages and DCs
    • R5 tropic stains
      • Major infective strain
  • CXCR4
    • Expressed on naïve CD4 T cells
    • ​Binds CXCL12
    • X4 tropic strains
      • Not naturally transmitted
      • Evolve through mutation, later on in disease
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8
Q

Describe infection with HIV

A
  1. HIV (R5 strain) introduced in mucosal tissue
  2. HIV binds DC
  3. DC drains to LN
  4. HIV infects activated CD4 T cells
    1. ​+ effector memory CD4 T cells in the tissue
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9
Q

Describe the progression to AIDS

Describe the virus titre & CD4 T cell count across time

A
  1. Acute infection (6-12 weeks)
    • ​​High viral load
    • Drop in CD4 T cell numbers
  2. Seroconverions
    • ​A robust immune response is launched, and the virus drops down to undetectable levels
  3. Clinical latency (1-15+ yrs)
    • ​Clearance of virus (still present though)
    • Recovery of CD4 T cell numbers (somewhat)
  4. Progressive increase in virus titre and decrease in CD4 T cell numbers
    • ​’Wobble’ in CD4 T cell numbers reflects that the virus is constantly mutating and trying to reactivate
  5. AIDS
    • ​V. high virus titre
    • V. low numbers of CD4 T cells
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10
Q

Describe the role of CD4 T cells in immunity

A
  • Play a central role in coordinating the immune repsonse
    • ​B cells
      • ​CD40L ligation allows CSR and SHM
      • Allows production of various isotypes and high affinity Ab
    • APCs
      • CD40L ligation licenses APCs for more effective CD8 T cell activation
    • CD8 T cells
      • ​Activated through licensed APCs
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11
Q

Outline the ways in which CD4 T cells are depleted during HIV infection

A
  1. Cytopathic effects of virus
    • ​​Direct infection with HIV causes CD4 T cells to die
  2. Killing by HIV-specific CD8 T cells
    • ​​Infected CD4 T cell presents HIV Ag in the context of MHC I
  3. Increased sensitivity to apoptosis
    • ​​Infected activated CD4 T cell expresses high levels of Fas
    • Ligation with FasL results in apoptosis
  4. Formation of syncytia
    • ​​Fusion of infected & uninfected CD4 T cells
    • Through gp120 expression on infected cell & CD4 on uninfected cell
    • → dysfunctional, multinucleated cell
    • These are prevalent in biopsies of HIV+ individuals
  5. ADCC
    • ​​Abs against HIV antigens bind infected CD4 T cells
    • NK cells kill infected cells
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12
Q

Describe resistance to HIV

A
  1. CCR5 mutation
    • ​​HIV can’t infect T cells
    • Berlin patient
      • ​BM transplant from individual homozygous for CCR5 mutation
  2. Strong HIV-specific CD4/8 T cell responses
    • ​Long term non-progression
    • Not associated with antibody response, rather cellular response
    • Relatively rare
    • T cells from these patients are multi-functional
      • ​Secrete a great range of cytokines
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13
Q

Describe immune responses in HIV infection

A
  • Acute
    • ​HIV-specific CD8 T cell response
  • Chronic
    • ​Ab response: anti-gp120

In general, the immune response controls viral replication, but does not eliminate

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14
Q

Why does HIV infection persist despite the robust immune response?

A

Viral evasion strategies

  1. Integration into host genome, viral latency
    • ​​Silent infection: undetected by the immune response
    • Formation of reservoirs in activated resting memory CD4 T cells, DCs and FDCs
  2. Avoidance of neutralising antibody
    • ​Mutation in Ab epitopes
      • ​In non-critical binding domains
    • Steric hindrance
      • Glycosylation (N-glycan shielding) over antigenic sites on gp120 so that Abs can no longer bind
  3. Mutation of CD8 T cell epitopes
    • ​Residues for TCR recognition
      • ​Abolishes peptide recognition by T cells
    • Residues for presentation in MHC
      • ​Abolishes peptide presentation
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15
Q

Describe treatment of HIV infection

A
  • HAART: highly active anti-retroviral therapy
    • ​Cocktail of various anti-retrovirals
      • ​Prevents selection of resistant mutants
    • Target various stages of HIV repication cycle
    • Classes:
      • Nucleoside analogues
      • Protease inhibitors
      • CCR5 antagonists
        • ​New class
    • Expensive
      • $10-15 000 per annum
      • Not viable for sub-saharan Africa
    • Ineffective against latently infected cells
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16
Q

Outline the HIV vaccine story

A
  • A number of vaccines have been trialled. None have been successful
  • VaxGen
    • ​gp120
  • STEP
    • ​rAdenovirus 5 ( gag T cells)
  • RV114
    • Canarypox vector + gp120
  • HVTN 505
    • ​DNA + rAdenovirus 5
17
Q

Describe the STEP vaccine trial

A
  • Phase III trials
  • Vaccine:
    • ​Recombinant adenovirus 5 (Ad5) expressing
    • HIV gag/pol/nef (clade B)
  • Vaccination of 3000 high-risk individuals
    • ​Half received vacine, others received placebo
  • Results
    • ​Vaccination increased the incidence of HIV infection
    • Why?
      • ​Vaccine generates good CD4 T cell responses
      • These activated CD4 T cells express CCR5, generating a reservoir for HIV
      • When HIV was eventually encountered, there was a reservoir ready to be infected with HIV
  • “Disaster on the scale as the Challenger”
18
Q

Describe the **RV114 **vaccine

A
  • Prime-boost combination of 2 vaccines
    • Canaryvirus vector & protein with gp120
  • Very expensive & labour intensive to run this trial
  • Results
    • 30% efficacy
    • No correlation between neutralising Ab and protection
19
Q

What kills HIV+ patients?

A

The profound immunodeficiency

The people end up with SCID-like disease

20
Q

How is HIV transmitted?

A

Blood & sexual fluids

(not saliva)

21
Q

Globally, how many people are HIV positive?

A
  • 35 million
  • 2.3 people infected per year
22
Q

Where did HIV originate?

A
  • HIV-1: chimpanzees
  • HIV-2: sooty mangabees
23
Q

Which clades of HIV are prevalent in which countries?

A

All the important clades are HIV-1, group M

Developed countries

  • Clade B

Sub-saharan Africa & SE Asia

  • Clade C
24
Q

What was the cross over event of HIV from monkeys to humans?

A
  • Polio vaccine has been exonerated
  • Bushmeat trade
    • ​It is widely accepted that this was the cause
    • Primates killed for food etc
25
Q

What is the significance of T cell activation on HIV replication?

A
  • When T cells are activated, NFKB is present
  • NFKB activates LTRs, resulting in:
    • Integration of the cDNA into the host genome
    • Increased virus synthesis
26
Q

Compare the presence of R5 and X4-tropic HIV strains

A
  • R5 strain
    • ​Major infective strain
    • Depletes memory and activated CD4 T cells
  • X4 strain
    • ​Evolves later in the progression of disease
    • Depleted naïve CD4 T cells
27
Q

Describe the SIV vaccine that was trialled in monkeys

A
  • Adenovirus vector vaccine containing immunodominant CD8 T cell epitope (against Gag) + IL-2
  • Initially, monkeys were protected from SIV
  • Later, the animals succumbed to infection
  • Viral escape
    • ​CD8 T cell epitope mutates anchor residue
    • Due to immune pressure
    • Epitope no longer presented by MHC I
    • No longer targeted by the CD8 T cells
    • Virus establishes reservoir & monkey dies