Lecture 10 - Viral Immunity II Flashcards
What are the key principles of viral evasion of the immune system?
- Avoid recognition
2. Interfere with the function of the immune system
In particular, which class of viruses have acquired strategies for immune evasion?
Large complex DNA viruses
e.g.
• Herpesviruses
• Poxviruses
List the various mechanisms of immune evasion by viruses
- Antigen variation
- Blocking / interfering with Ag presentation
- Blocking / interfering with host cell function
- Viral mimicry
- Infecting immune cells
- Persistence
• Latency
• Chronic infection
Describe the structure of the influenza virion
Envelope:
• HA
• NA
• M1 (membrane protein)
8 strands of RNA
NS-1: Non-structural protein
Polymerase complex: • PB1 • PB2 • PA • NP
Describe how viruses employ antigenic variation to avoid the immune system
- Influenza antigenic shift
• Recombination of RNA strands of different strains of influenza within a ‘mixing vessel’ (e.g. pig)
• Generates a strain of influenza that is different enough not to be recognised by the immune system - Antigenic drift
• Slow changes in antigenic sequences
• Due to error-prone viral RNA polymerase (no proof reading mechanism)
• Can result in antigenic sites that are no longer recognised by Abs in population - Glycosylation
• Addition of carbohydrate groups to antigenic molecules means that Abs do not have access to epitopes
Describe how viruses interfere with antigen processing and presentation to avoid the immune system
- Inhibition of proteasome
• EBV
• CMV - Inhibition of TAP
• HSV - Removal of MHC I from ER
• CMV - Inhibition of MHC I synthesis
• Adenovnirus
• hCMV - Trapping of MHC I in ER
• Adenovirus
• hCMV - ‘Decoy’ MHC I-like molecules
• Expressed on surface of host cells
• ‘Distracts’ T cells
• mCMV
Describe how viruses interfere with host cell functions to avoid the immune system
(Use an illustrative example)
e.g. Influenza NS-1
NS-1 functions:
1. Inhibition of type I IFN production (through inhibition of RIG-I), thus interference with induction of anti-viral state
- Blocks processing of anti-viral mRNAs
- Enhances viral protein production
• Inhibition of PKR; activation of eIFα2
• Inhibition of RNAse L - Limits apoptosis of host cells
Describe normal PKR function
- Type I IFN activates PKR, which becomes phosphorylated
- Activated PKR phosphorylates eIFα2 to render it inactive
- eIFα2 can no longer promote translation (of both cellular and viral proteins)
Describe normal 2,5-oligo A synthetase activity
- Type I IFN activates 2,5-OAS
- 2,5-OAS activates RNAse L
- RNAse L chops up viral RNA
Describe normal RIG-I function in viral immunity
- Viral RNA ligates with RIG-I in cytosol
- RIG-I associates with IPS-1 on mitochondria
- Activation of NFKB and IRF signalling
- Transcription of type I IFN
What is the function of active eIFα2?
Promotes translation of proteins
Describe how NS-1 interferes with the following:
• RIG-I
• PKR
• 2,5-OAS
RIG-I:
• Inhibits activation
• Inhibits production of type I IFN
PKR:
• Inhibits activation
• eIFα2 does not become inactivated
• No blocking of protein synthesis
2,5-OAS:
• Inhibits activation
• RNAse L does not become activated
Describe how poxviruses deal with type I IFN
Poxviruses produce soluble and membrane bound molecules that ‘mop up’ type I IFN
Describe how viral mimicry can avert the immune system
Give specific examples
Viruses can generate molecules that mimic host cytokines
This confuses the host immune system, resulting in dampening down of the effector function
Cytokines:
• IL-10
• EBV
Chemokines:
• CXC1 (like IL-8)
• Recruits neutrophils
• hCMV
Cytokine receptors:
• TNF
• Herpesvirus and Poxvirus
Soluble cytokine receptors • Mop up pro-inflammatory cytokines • TNF receptors • IL-1 receptor • IL-18 binding protein
Chemokine receptors
• US28
• hCMV
Give examples of viruses infecting cells of the immune system
How does this give the virus an advantage?
Infection of immune cells interferes with their function
CD4+ T cells
• HIV
• Results in death of CD4+ T cells
B cells:
• EBV
• Results in latent infection
DCs: • Poxviruses • Herpesviruses • Measles virus • Alters their function
Lymphoid stromal cells
• Ebola
• LCMV
• Death / altered function of lymphoid tissues