Kaplan Bio Flashcards
cell theory: all … are made of cells cell is the … of life cells can arise only from … cells carry … as …, which is passed from each parent cell to its subsequent daughter cell
living things
basic functional unit
other preexisting cells
genetic information; DNA
viruses, unlike cells, cannot … directly and can have … as their genetic material. thus, they are not living
reproduce; RNA
(nucleus) contains all of the genetic material necessary for …
surrounded by a … or …
replication; nuclear membrane; envelope
(nucleus) … in the membrane allow for exchange of molecules between the nucleus and the cytoplasm
nuclear pores
(nucleus) linear DNA has organizing proteins known as … and is further wound into … –> these package and order the DNA into … (beads on a string)
histones; chromosomes
nucleosomes
(nucleus) … is where rRNA is synthesized –> 25% of the nucleus’s volume
nucleolus
(mitochondria) has outer and inner membrane:
outer membrane is the barrier between the … and the …
inner membrane is highly … (…) and contains the molecules and enzymes for the …
inner enviro; cytosol
invaginated; cristae; electron transport chain
(mitochondria) function of the cristae is to … available for electron transport chain enzymes
space between membranes is … –> allows for … to build for e- transport chain
increase surface area
intermembrane space; proton gradient
(mitochondria) …: space inside the inner membrane –> gel-like substance
mito is … –> has its own genes and replicate independently of the nucleus via … –> supports theory that mitochondria arose from anaerobic prokaryotic cell that was invaginated
matrix
semi-autonomous; binary fission
(mitochondria) … –> transmission of genetic material independent of the nucleus
cytoplasmic/extranuclear inheritance
(mitochondria) mitochondria is the source of … –> process begins when the mitochondria releases enzymes from the e- transport chain
apoptosis
(lysosomes) contain … enzymes –> digestive organelle
lysosomes work with … –> transport, package, and sort cell material coming to and from the cell membrane
hydrolytic enzymes
endosomes
(lysosomes) endosomes: transport material to the …, …, or … pathway
trans-Golgi; cell membrane; llysosomal
(lysosomes) lysosomes are also involved in apoptosis. when they release their …, the cell dies
hydrolytic enzymes
(endoplasmic reticulum) contains a … membrane
smooth and rough –> rough has …
double
bound ribosomes
(endoplasmic reticulum) bound ribosomes … that are secreted into the lumen of the ER
smooth ER = … and … –> also transports to the … from the RER
translate proteins
lipid synthesis; detoxification; Golgi apparatus
(Golgi apparatus) materials are transported through … and … here –> modification can occur through intro of … which indicate where the product must go in the cell
vesicles; modified; signal sequences
(peroxisomes) contain .. which is used to break down …
H2O2; long chain fatty acids;
(peroxisomes) involved in … and has some of the enzymes used in the …
phospholipid synthesis; pentose phosphate pathway
(cytoskeleton) provides … and enables materials to be … in the cell
contains three components: …, …, …
structure; transported
microfilaments; microtubules; intermediate filaments
(cytoskeleton) … are made of rods of actin and are resistant to compression and fracture
microfilaments
(cytoskeleton) actin can act in conjunction with … to allow for movement –> involved in …,
… of mitosis is formed from these
myosin
cytokinesis
cleavage furrow
(cytoskeleton) microtubules are polymers of … –> provide primary pathways for motor proteins to …
tubulin; carry vesicles
(cytoskeleton) … and … are made of microtubules
…: movement of materials along surface of cell
…: movement of cell itself
cilia; flagella
cilia
flagella
(cytoskeleton) …: 9 microtubule pairs in a ring with 2 in the center –> structure of … and …
9 + 2 structure; cilia; flagella
(cytoskeleton) centrosome contains … –> organizing centers for microtubules
these have 9 … of microtubules with … center
centrioles; triplets; hollow
(cytoskeleton) intermediate filaments: …, …, …, …
keratin; desmin; vimentin; lamins
(cytoskeleton) intermediate filaments:
… and maintenance of the integrity of the …
makes cell structure more … and helps …
the type of intermediate filament proteins is dependent upon the … and … type
cell-cell adhesion; cytoskeleton
rigid; anchor organelles
cell; tissue
four tissue types: …, …, …, …
epithelial; connective; muscle; nervous
(epithelial tissue) covers … and lines …
protection against … and … (drying)
…, …, …
body; cavities
pathogens; desiccation
absorption; secretion; sensation
(epithelial tissue)
joined to one another and underlying connective tissue known as …
different functions depending on where it’s found
most organs use it for the … –> functional part of the organ
basement membrane; parenchyma
(epithelial tissue) tend to be …
polarized
(epithelial tissue) epithelia are classified according to their number of layers and cell shape:
…: 1 layer
…: multiple layers
…: appear to have multiple layers bc cell heights vary, but are only one layer
cells can be …, …, or …
simple
stratified
pseudostratified
cuboidal; columnar; squamous
(connective tissue) supports the body and provides a framework for …
epithelial cells to function
(connective tissue) contribute to the … (..) of the organ it’s a part of –> e.g. …, …, .., … tissue, …, etc
stroma; support bone cartilage tendons adipose tissue blood
(connective tissue) most cells produce and secrete materials like collagen to form the …
extracellular matrix
prokaryotes have DNA condensed into the … region
nucleoid
archaea are more similar to eukaryotes in terms of their … and … than to bacteria
genes; metabolic pathways
eukaryotes likely evolved from …
archaea
both archaea and eukaryotes have …, start translation with … and have similar …
histones; Met; polymerases
archaea can use multiple sources of energy –> …/…
photosynthetic; chemosynthetic
some bacteria have … or … (the latter is like cilia)
flagella; fimbriae
some antibacterial vaccines differentiate between bacterial and eukaryotic … and allow for targeting of …
flagella; bacterial flagellum
antibiotics can target the bacterial …, which is smaller than eukaryotic
ribosome
bacteria outnumber human cells in the body by …:…
10:1
bacteria can be classified according to their shapes:
…: spherical (e.g. strep)
…: rod-shaped (e. coli)
…: spiral-shaped (syphilis)
cocci
bacilli
spirilli
any bacteria that can survive without oxygen are … those that can use oxygen are …
anaerobes; facultative anaerobes
…: cannot use oxygen for metabolism but are unharmed by it
aerotolerant; anaerobes
prokaryotes contain cell walls:
cell wall + cell membrane = …
cell wall provides … and controls movement of .. into and out of the bacteria
envelope
structure; solutes
gram + and gram - (… is more dangerous):
determined by staining the bacteria with .. and using a counterstain. if crystal violet stain was absorbed –> …
gram -;
crystal violet;
gram +
gram + has … and …
peptidoglycan; lipoteichoic acid
gram - has cell walls that are much … and have less … these cell walls are separated from the cell membrane by the …
thinner; peptidoglycan; periplasmic space
gram - bacteria have an … that has … and … that is outside the cell wall
outer membrane; phospholipids; lipopolysaccharides
flagella are used for … and can move the cell towards … or away from …
movement; food; toxins
ability for the cell to recognize chemical stimuli and move towards/away form it is …
chemotaxis
flagella has:
…: helical structure of flagellin
…: anchors the flagellum to the cytoplasmic membrane and acts as its motor
…: connects filament and basal body, allowing filament to spin when basal body rotates such that the bacterium moves
filament
basal body
hook
bacteria DNA is coiled around … proteins. archaea have ..
histone-like; true histones
…: circular structures containing DNA from external sources –> unnecessary for prokaryote’s survival but can confer a selective advantage
NOT part of …
plasmids; bacterial genome
electron transport chain of prokaryotes is located in the … itself
cell membrane
prokaryotic ribosomes have … and … subunits, eukaryotic ribosomes have … and … –> prokaryotic is smaller
30S; 50S; 40S; 60S
prokaryotes reproduce by ….:
circular chromosome attaches to … and replicates
plasma membrane and cell wall compress along middle of cell such that it separates into two daughter cells
binary fission; cell wall
plasmids can carry … –> makes bacteria more pathogenic
virulence factors
…: plasmids that can integrate into bacterial genome
episomes
bacterial genetic recombination diversifies bacteria:
…: integration of foreign material into genome –> tends to be from other …
…: sex for bacteria
…: requires a viral vector to carry genetic material from one bacteria to another
transformation
conjugation
transduction
(bacterial conjugation) two cells form a … that allows for genetic material to transfer –> goes from donor .. (..) to recipient .. (..) –> … process
conjugation bridge; male; +; female; -; unidirectional
(bacterial conjugation) conjugation bridge is made from … from donor –> necessitates presence of …
… (…) factor is a sex factor of e. coli. donor cell replicates and donates a copy of this to the recipient, converting it into an … cell
facilitates rapid spread of … and virulence
sex pili sex factors F; fertility F+ cell antibacterial resistance
(bacterial conjugation) sex factor is … but can be incorporated in genome via …
plasmid; transformation
(bacterial conjugation) when sex factor is in genome, the entire DNA sequence will copy and the cell will try to transfer its whole genome to recipient, but conjugation bridge typically breaks before full sequence is transferred –> …
high frequency of recombination (hfr)
bacterial transduction:
bacteriophages can trap host DNA as it assembles and can transfer it to a new host cell when it infects it. this DNA can be incorporated in the …
new host’s genome
…: genetic elements that can insert/remove themselves from the genome (present in prokaryotes and eukaryotes)
transposons
bacteria grow in phases:
… phase: bacteria adapts to new environmental conditions
… phase: growth increases, exponential increase in number of bacteria in colony
… phase: when limits on resources slows reproduction
…. phase: bacteria exceeded environmental ability to support them (…)
lag
exponential/log
stationary
death
viruses are much smaller than prokaryotes and eukaryotic cells are …x larger than prokaryotes
10
viruses composed of …, …, … containing …
genetic material; protein coat; envelope; lipids
(viruses) protein coat = …
if envelope is present, it will surround … –> composed of … and …
enveloped viruses are easier to kill bc envelopes are sensitive to …, …, and …
capsid;
capsid; phospholipids; virus-specific proteins
heat; detergents; desiccation
(viruses) viruses don’t have … for protein synthesis
…: viral progeny
ribosomes
virions
(viruses) bacteriophages have a … and …
…: injects genetic material
…: help phage recognize and connect to correct host
tail sheath; tail fibers
tail sheath
tail fibers
(viruses) single stranded RNA viruses can be + sense or - sense
…: genome can be directly translated to functional proteins by host cell’s ribosomes
…: require synthesis of a complementary RNA strand that is then used for protein synthesis
+; -
(viruses) …: enveloped, single-stranded RNA viruses that contain … to synthesize DNA
DNA is incorporated into host genome and is replicated and translated –> allows for …
e.g HIV
retroviruses; reverse transcriptase
indefinite infection
(viruses) viral life stages
…: virus binds to receptors and cell and inserts viral material –> … enter cell intact, …. just insert genome
…: viral genome is translated and virions are formed
infected; enveloped virus; bacteriophages
translation and progeny assembly
(viruses) viral life stages contd:
…: cells can die, allowing for release of progeny; cells can lyse from being overfilled with virions; cells can leave by fusing with the host’s cell membrane (…), which allows for the infect cell to be continually used by the virus –> … cycle
progeny release; extrusion; productive
(viruses) lytic and lysogenic cycles:
… cycle: bacteriophage maximally uses host cell, which then lyses to release progeny –> bacteria in this phase are …
lyric; virulent
(viruses) lytic and lysogenic cycles:
if the bacterium doesn’t lyse, the virus can integrate into … –> …/… –> begins … cycle
virus is replicated when bacterium reproduces
host genome; provirus; prophage; lysogenic;
(viruses) lytic and lysogenic cycles:
lysogenic cycle:
certain environmental factors can trigger the … from the … and enables the lytic cycle to start
lysogenic cycle can be advantageous because it prevents bacteria from being infected with … (prevents …) and since ejection of provirus isn’t guaranteed, there may be some advantage here
release of the provirus; genome; other phages; superinfection;
(viruses) …: infectious proteins
can trigger … of other proteins, typically by converting … structures to …
these aggregate and prevent proper cell function
prions
misfolding; alpha; beta sheets
(viruses) …: have very short circular single-stranded RNA and infects plants
silences genes in plant genome
there are some that infect humans
viroids
lysosymes are surrounded by a … membrane
ribosomes are …
single; not surrounded by a membrane
connective tissue often secretes substances to form the … such as … and …
extracellular matrix; collagen; elastin
.. tissue is considered a different tissue type of it sown (i.e. neither connective nor epithelial)
muscle
… (…): mammals that encase developing embryos in hard-shelled amniotic eggs and lay them to be hatched
prototherians; monotremes
… (…): mammals whose fetuses undergo development in the uterus and then climb out of the birth canal into the marsupium (pouch)
metatherians; marsupials
…: specific series of phases during which a cell grows, synthesizes DNA, and divides
cell cycle
(cell cycle) … is the longest part of the cell cycle
consists of the .., …, and … phases
interphase; G1; S; G2
(cell cycle) cells that don’t divide are in the … phase
G0
(cell cycle) during interphase, chromosomes are in a less condensed form –> …
chromatin
(cell cycle) G1 stage, …: … are synthesized and the cell grows in size
to proceed to S stage, certain criteria must be met –> restriction point
presynthetic gap; organelles
(cell cycle) S stage, ….: DNA is replicated such that chromosomes now consist of two … bound by a …
synthesis of DNA; chromatids; centromere
(cell cycle) G2 stage, … gap: more cell growth, … synthesis. cell is preparing for …; proper … is assessed here. cell ensures that there is enough … and … to divide and that replication occurred without erro
postsynthetic; protein; mitosis; chromosome duplication; cytoplasm; organelles
(cell cycle) M stage, … + …
mitosis; cytokinesis
(cell cycle) G1/S checkpoint: main protein here is … –> cell checks that DNA is in good condition for synthesis
p53
(cell cycle) G2/M checkpoint: ensures that cell has achieved adequate … and … have been properly replicated. p53 also involved here
size; organelles
(cell cycle) molecules responsible for cell cycle: … and … (CDK)
… activate …, forming … complexes
concentrations of cyclins vary throughout the cell cycle
cyclins; cyclin-dependent kinases
cyclins; CDKs; CDK-cyclin complexes
(cell cycle) CDK-cyclin complexes … which promote transcription of genes required for the next stage of the cell cycle
phosphorylate transcription factors
(cell cycle) cancer can be caused by mutation of …, the gene that produces … this prevents the cell cycle from stopping to repair damaged DNA. Mutations then accumulate, resulting in a cancerous cell that continues to divide
TP53; p53
(cell cycle) …: spread of cancerous cells that occurs when the cells produce factors that allow it to become involved in local invasion or spread through the bloodstream/lymphatic system
metastasis
(mitosis) for non-germ-line cells only:
…: condensation of chromatin into chromosomes
prophase
(mitosis) prophase:
… separate and move to opposite poles –> … are responsible for the correct division of DNA
centriole pairs; centrioles
(mitosis) prophase:
centrioles form …, made of microtubules
… is one of the two microtubule organizing centers of the cell. the other is …/…
some of the microtubules form … that anchor centrioles to cell membrane, and others extend toward the cell’s center
fibers;
centrosome; flagella/cilia
asters
(mitosis) prophase:
… dissolves, such that spindle fibers can contact chromosomes
…. appear at the centromere –> points of attachment for fibers of the spindle apparatus (… fibers)
nuclear membrane;
kinetochores; kinetochore
(mitosis) …: kinetochore fibers interact with fibers of spindle apparatus to align chromosomes at the metaphase plate (… plate –> center of cell)
metaphase; equatorial
(mitosis) …: … separate and are pulled to opposite poles by shortening of kinetochore fibers
anaphase; sister chromatids
(mitosis) … acts as reverse of prophase –> … disappears,… reforms, … reappear, chromosomes …
telophase; spindle apparatus; nuclear membrane nucleoli uncoil
(mitosis) …: division of cytoplasm and organelles
as part of regulation, each cell goes through a finite number of divisions and then undergoes …
cytokinesis
programmed death
(meiosis) only occurs in …, results in up to … gametes:
one round of replication + rounds of division
Meiosis I: … are separated to form … daughter cells –> … division
Meiosis II: separation of .. –> … division
gametocytes; 4;
homologous chromosomes; haploid; reductional
sister chromatids; equational
(meiosis) Meiosis I:
prophase I: chromatin condenses into chromosomes, spindle apparatus forms, nucleoli and nuclear membrane disappear
difference between mitosis: homologous chromosomes come together and intertwine –> …
synapsis
(meiosis) prophase I:
each synaptic pair contains 4 chromatids –> …
homologous chromosomes are held together by a synaptonemal complex
chromatids of homologous chromosomes can break at point of contact (…) to exchange genetic material –> …
tetrad
chiasma
crossing over
(meiosis) prophase I:
…: occurs when only one segment of DNA is exchanged between the homologous chromosomes
…: occurs when there are two points of contact between homologous chromosomes and two segments of DNA are exchanged simultaneously
single crossovers
double crossovers
(meiosis) Prophase I:
crossing over is a form of genetic recombination –> can …
…: tendency for genes to be inherited together
unlink linked genes
linkage
(meiosis) prophase I
crossing over explains Mendel’s … –> inheritance of one allele has no effect on likelihood of inheriting certain alleles for other genes
second law of independent assortment
(meiosis) metaphase I: … align at the metaphase plate and each pair attaches to a spindle fiber by its …
tetrads; kinetochore
(meiosis) anaphase I: … separate and are pulled to opposite poles –> …, accounts for Mendel’s …
homologous pairs; disjunction; first law of segregation
(meiosis) anaphase I:
each chromosome of paternal origin disjoins from its homologue of maternal origin –> distribution of homologous chromosomes to the daughter cells is .. with respect to paternal origin
separating of two homologous chromosomes–> …
random; segregation
(meiosis) telophase I: nuclear membrane forms around each new nucleus –> cells now …
cell divides by cytokinesis
…: short rest period between cell divisions during which chromosomes partially uncoil
haploid
interkinesis
(meiosis) Meiosis II:
…: nuclear envelope dissolves, nucleoli disappear, centrioles migrate to opposite poles, spindle apparatus begins to form
…: chromosomes align on metaphase plate
…: centromeres divide, separating …, which are pulled to opposite poles by spindle fibers
…: nuclear membrane forms, cytokinesis follows
prophase II
metaphase II
anaphase II
telophase II
(meiosis) meiosis II:
at this point there are up to … haploid daughter cells
… may result in fewer than four cells if an egg is unfertilized after ovulation
4; oogenesis
(meiosis) males are … with respect to many of the genes on the X chromosome since they only have one copy –> must express that allele
females are homo or heterozygous since they have 2 X chromosomes
hemizygous
Y chromosome contains very little … –> one gene is SRY (sex-determining region Y) –> initiates … and, thus, formation of …
genetic information; testis differentiation; male gonads
in males, gonads develop into testes which have two functional components: “
…: sperm are produced here and are nourished by … cells
…: secrete testosterone and other male sex hormones
seminiferous tubules; Sertoli cells
interstitial cells of Leydig
testes located in the
scrotum
sperm moves to the … where their flagella gain motility and are then stored until …, during which they travel through the … to the …, and then through the urethra to exit via the penis
epididymis; ejaculation; vas deferens; ejaculatory duct
sperm is mixed with … to form semen, produced by the …, …, and … g
seminal fluid; seminal vesicles; prostate gland; bulbourethral gland
seminal vesicles nourish sperm with …
seminal vesicles + prostate gland give fluid mildly … properties so it can survive in more acidic enviro of the female reproductive tract
… (…) glands produce clear viscous fluid that cleans remnants of urine and lubricates urethra during sexual arousal
fructose
alkaline
bulbourethal; cowper’s
(spermatogenesis)
diploid stem cells that act as sperm precursor: …
when these replicate their genetic material, they are …
spermatogonia
diploid primary spermatocytes