Intro to virology and laboratory diagnosis of viral diseases Flashcards

1
Q

Written record of a virus infection consists of a hieroglyph from Memphis, ancient Egypt’s depicting Siptah, a temple
priest showing a typical clinical sign of paralytic disease______

A

1400 BC
Poliomyelitis.

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2
Q

Pharaoh Ramses V is believed to have died/succumbed to

A

1196 BC
smallpox

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3
Q

1000 BC
Smallpox was endemic in China, in response, the practice of
_______ was developed.

A

variolation

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4
Q

spread across Asia
* It was also practiced in Africa and the method varies from region to region.

A

VARIOLATION

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5
Q

MAY 14, 1976
James Phipps (an 8-year-old) was vaccinated using ______

A

cowpox infected material of Sarah Nemes (milkmaid).

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6
Q
  • Genetic elements that can replicate only inside a living cell
  • Dependent on the host cell for energy, metabolic intermediates, and protein synthesis
  • All the functions of the host cell are being reserved for its own energy source, purpose, and energy use.
  • Possess their own genomes (RNA and DNA)
  • Do not grow in artificial media.
    o Grow in cell culture, chick embryo, animals.
  • Small infectious units (measured in nanometer, about 20-300
    nm in diameter)
A

OBLIGATE INTRACELLULAR PARASITES

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7
Q
  • is required (only
    visualized in electron microscopy)
A

Electron microscopy

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8
Q

smallest animal virus

A

Parvovirus

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9
Q

largest animal virus

A

Poxvirus

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10
Q

Virus types are very specific, and each has a limited number of hosts it can infect; this referred to as

A

viral tropism

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11
Q

o Capsomeres (made up of protomers;
responsible for the shape of the virus)
o May or may not have an envelope made of lipid
derived from the host cell membrane.
▪ GLYCOPROTEIN SPIKES
o Envelope comes from the host cell

A

Protective Protein Coat

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12
Q

made up of protomers;
responsible for the shape of the virus

A

Capsomeres

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13
Q

May or may not have an envelope made of lipid derived from the host cell membrane.

A

GLYCOPROTEIN SPIKES

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14
Q

are very susceptible to drying and
destruction in the environment, they typically are transmitted by direct contact, such as respiratory, sexual, or parenteral
contact.

  • This prevents exposure to the environment and successful propagation of the viral agent to another susceptible host.
A

Enveloped viruses

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15
Q

Viruses that do not have an envelope are often referred to as _____
- are very resistant to environmental factors.
o Because of their stability, they typically are transmitted by the fecal-oral route

A

“naked” viruses.

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16
Q
  • Protects the viral genome.
  • Responsible for the tropism to specific cell types in naked
    viruses
  • Composed of repeating structural subunits (capsomeres)
    which associate to form a helical or icosahedral structure.
  • Irregularly shaped capsids have a helical form of icosahedral
    structure
  • Icosahedral capsids, cubical with 20 flat
A

VIRAL CAPSID

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17
Q
  • Encloses the nucleocapsid
  • During the infectious process, enveloped virion bud from the host cells cytoplasmic, nuclear, or endoplasmic reticulum
    membrane and a protein of the membrane remains attached to the virion as the viral envelope.
  • Capsid covers the genome; lipid envelope encloses/covers
    nucleocapsid.
A

LIPID ENVELOPE

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18
Q

Inserted in the viral envelope are viral proteins such as _____

A
  • hemagglutinin (receptor for the host cell; give entry to the host cell) (HA),
  • neuramidase (enzyme used to lyse/to
    facilitate the exit from the host cell), or glycoprotein spikes
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19
Q

assist in the stabilization of attachment
for the lipid envelope and host cell for viral entry

A

Glycoprotein spikes

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20
Q

may also be present between the envelope and nucleocapsid which may have enzymatic activities or biological function, e.g., inhibition of host-cell transcription (for the virus to survive inside the host cell)

A

Matrix protein

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21
Q
  • Component: PROTEIN
A

NAKED CAPSID

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22
Q

Naked capsid environmentally stable to the following

A
  • temperature
  • acid
  • proteases
  • detergents
  • drying
  • released from cell by lysis
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23
Q
  • can dry out and retain infectivity
  • can be spread easily (on fomites, from hand to hand, by dust,
    by small droplets
  • can survive the adverse conditions of the gut
  • can be resistant to detergents and poor sewage treatment
  • antibody may be sufficient for immunoprotection (vaccination
    to protect from naked viruses)
  • ex. Poliovirus (transmitted orally, but can be protected by
    polio vax)
  • only released by cell lysis
A

NAKED CAPSID PROPERTIES

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24
Q

ENVELOPE CAPSID COMPONENT

A
  • Membrane lipids
  • Proteins
  • Glycoproteins
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25
Q

Envelop capsid Environmentally LIABLE – disrupted by the following:

A
  • Acid
  • Detergents
  • Drying and heat
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26
Q

Mode of entry: blood transfusion – so gastrointestinal is not
affected.

  • modifies cell membrane during replication.
  • released by budding and cell lysis.
  • must stay wet (para di mamatay)
  • spreads in large droplets, secretion, organ transplants, and
    blood transfusions
  • cannot survive the gastrointestinal tract.
  • Does not need to kill the cell to spread.
  • may need antibody and cell-mediated immune response for
    protection and control.
  • Elicits hypersensitivity and inflammation to cause immunopathogenesis.
  • Viruses can produce neoantigens.
A

Envelope capsid properties

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27
Q
  • Icosahedral structure (cubic)
  • Helical structure
  • Complex structure (Poxviridae)
A

NUCLEOCAPSID STRUCTURES

28
Q

A subunit of the capsid, and outer covering of the protein that
protects the genetic material of the virus

A

CAPSOMERES

29
Q

icosahedron with 12 vertices
(pentones- always 12) and 20 faces
(hexons/heptons- varies among the virus)

A

Icosahedral

30
Q

icosahedron with 12 vertices
(pentones- always 12) and 20 faces
(hexons/heptons- varies among the virus)

A

Icosahedral

31
Q

protomers not grouped in
capsomeres but bound to form a ribbon-like structure.

A

Helical

32
Q

viruses that do not fit the first two
groups: exhibited by poxvirus and rhabdovirus

A

Complex

33
Q

protect against physical, chemical, and
enzymatic damage and are multiply redundant, with only a
few protein subunits repeated.

A

Capsomeres

34
Q

introduce the enclosed viral genome into the host cell by adsorbing tardily to host cell surfaces.

A

Capsid

35
Q
  1. Adsorption (recognition of the host cell and attachment to
    the host cell)
  2. Penetration (host cell membrane)
  3. Uncoating (envelope and capsid)
  4. Synthetic phase (enter nucleus of the host cell)
  5. Viral assembly (assemble proteins and genomes; undergo
  6. Release (budding or cell lysis)
A

VIRAL MULTIPLICATION CYCLE (INFECTIOUS CYCLE)

36
Q

It involves recognition of a suitable host cell and specific binding between viral capsid proteins (often the glycoprotein
spikes) and the carbohydrate receptor of the host cell.

  • Each type of virus specifically recognizes and attaches to a specific type of host cell, allowing infection of some tissues
    but not others (viral tropism, as described previously).
A

ATTACHMENT (ADSORPTION)

37
Q
  • The process by which viruses enter the host cell
  • One mechanism of penetration involves fusion of the viral envelope with the host cell membrane.
  • Detection of syncytia can be used to determine the presence of virus in cell cultures or stained smears of clinical specimens. Other mechanisms of viral penetration include
  • phagocytosis by host cells (endocytosis) or injection of viral nucleic acids into the host cell.
A

PENETRATION (VIRAL ENTRY)

38
Q
  • Occurs once the virus has been internalized.
  • It is the process by which the capsid is removed; this may be by degradation of viral enzymes or host enzymes or by
    simple dissociation.
  • necessary to release the viral genome for
    delivery of the viral DNA or RNA to its intracellular site of replication in the nucleus or cytoplasm
A

UNCOATING

39
Q
  • Involves the production of nucleic acids and protein polymers.
  • Viral transcription leads to the synthesis of messenger RNA (mRNA), which encodes early and late viral proteins.
  • Early proteins are nonstructural elements, such as enzymes, and late proteins are structural components.
  • Rapid identification of virus in a cell culture can be accomplished by detecting early viral proteins in infected cells using immunofluorescent staining techniques.
A

MACROMOLECULES SYNTHESIS

40
Q
  • Structural proteins, genomes and in some cases, viral enzymes are assembled into virus particles
  • Envelopes are acquired during viral budding from the host cell membrane
  • Nuclear endoplasmic reticulum and cytoplasmic membranes are common areas for budding
  • Acquisition of envelope is the final step in viral assembly
A

VIRAL ASSEMBLY

41
Q
  • Occurs after cell lysis or by virus particle budding from cytoplasmic membranes
  • Release by budding may not result in rapid host cell death unlike cell lysis
  • Detection of cell lysis in cell culture – detection of virus
A

RELEASE OF INTACT VIRUS PARTICLES

42
Q

Influenza virus which are released by budding can be detected by

A

hemadsorption

43
Q

RBCs added to the culture
medium but not to_____

A

Uninfected cells

44
Q

1 host cell

A

1000 particles

45
Q

may be due to errors of mutations or
virus assembly/packaging of components that occur during the infectious cycle

A

Non-infectious particles

46
Q

6 orders

A

name ending in -virales

47
Q

87 families

A

viridae

48
Q

19 subfamilies

A

virinae

49
Q

348 genera

A

-virus

50
Q

o Type of nucleic acid
o Symmetry and shape of the capsid
o Presence or absence of envelope (naked or envelope)
o Size of the virus particle

A

Based on 4 major properties of viruses

51
Q
  • With advances in molecular techniques, sequencing of viral nucleic acids, including DNA or RNA genomes, has become
    a routine procedure in clinical research setting and clinical diagnostic laboratory.
  • But due to genetic instability of viral genomes, DNA/RNA sequencing is limited to provide evidence for species
    relationship, epidemiologic comparison of isolates and genotype information which may direct antiviral therapies.
  • Clinical virologists currently categorize viruses first as DNA or RNA, then by family and common names based on nucleic
    acid sequence and phylogenic relatedness.
A

VIRAL TAXONOMY

52
Q

o All are DS DNA except

A

PARVOVIRUS

53
Q

All are icosahedral except

A

POXVIRUS

54
Q

All are enveloped except

A
  • PAPOVAVIRUS
  • ADENOVIRUS
  • PARVOVIRUS
55
Q

All multiply in nucleus except

A

POXVIRUS

56
Q

All are SS RNA except

A

REOVIRUS

57
Q

All are enveloped except PCR

A
  • PICORNAVIRUS
  • CALCIVIRUS
  • REOVIRUS
58
Q

All are non-segmented except ROBA

A
  • REOVIRUS
  • ORTHOMYXOVIRUS
  • BUNYAVIRUS
  • ARENAVIRUS
59
Q

Generally helical except the

A

POSITIVE SENSE RNA VIRUSES

60
Q
  • Calcivirus
  • Picornavirus
  • Flavivirus
  • Togavirus
  • Coronavirus
  • Retrovirus
  • icosahedral
A

POSITIVE SENSE

61
Q
  • Paramyxovirus
  • Orthomyxovirus
  • Filovirus
  • Rhabdovirus
  • Bunyavirus
  • Arenavirus
    – helical
A

NEGATIVE SENSE

62
Q

What was the first virus to be discovered?
a. Smallpox
b. Poliovirus
c. Both the given options
d. Neither

A

b. Poliovirus

63
Q

The following are general characteristics of virus, EXCEPT:
a. Obligate intracellular organism
b. Measures 20-300 nm
c. Grow in artificial culture media
d. Possess their own genomes

A

c. Grow in artificial culture media

64
Q

Which of the following viral components assist in the stabilization of attachment for the lipid envelope and host cell for viral entry?
a. Nucleocapsid
b. Matrix protein
c. Viral genomes
d. Glycoprotein spikes

A

d. Glycoprotein spikes

65
Q

Fusion of the viral envelope with the host cell membrane occurs during which phase of viral
replication?
a. Attachment
b. Penetration
c. Uncoating
d. Assembly

A

b. Penetration

66
Q

The viral classification is based on which of the following viral options?
a. Type of nucleic acid
b. Size of the virus
c. Symmetry and shape of the capsid
d. All of the given options

A

d. All of the given options