Intracellular Compartments and Protein Sorting 2 Flashcards

1
Q

What are most mitochondrial proteins encoded in?

A

nuclear DNA, although some made in mitochondria

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2
Q

Mitochondrial proteins are ______ on ribosomes and _______ into mitochondria

A

synthesized

imported

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3
Q

Proteins need to ______ outer and/or inner mitochondrial membranes through _________

A

cross, translocation

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4
Q

What directs proteins to correct compartment in mitochondria?

A

signal sequences

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5
Q

Where are mitochondrial signal sequences located?

A

N terminal and internal

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6
Q

_______ charged residues cluster on one end and ________ _______ on other end to form an ________ alpha helix

A

positively; uncharged hydrophobic; amphiphilic

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7
Q

For mitochondrial signal sequences what doe receptor proteins recognize instead of the precise sequence?

A

the configuration

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8
Q

On mitochondrial signal sequences, multi subunit protein complexes called ______ mediate translocation

A

protein translocators

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9
Q

Describe translocase of the outer membrane (TOM)

A

present in outer membrane
required for import of all nuclear encoded proteins
inserts them in outer membrane

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10
Q

Where is translocase of the inner membrane (TIM) located?

A

inner membrane

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11
Q

What are the two TIM complexes?

A

TIM22 TIM23

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12
Q

What does TIM 23 do?

A

transports soluble proteins into matrix and helps insert membrane proteins in inner matrix

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13
Q

What does TIM 22 do?

A

mediates the insertion of specific subclass of proteins

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14
Q

What are the two components of TOM and TIM complexes?

A

receptors for mitochondrial precursor proteins

translocation channels

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15
Q

What does Sorting and Assembly Machinery (SAM) complexes do?

A

translocate and inserts/folds beta barrel proteins in the outer membrane

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16
Q

What does the OXA complex do?

A

mediates insertion of proteins synthesized in mitochondria

17
Q

Precursor proteins entering mitochondria are folder or unfolded?

18
Q

How is the unfolding of precursor proteins maintained?

A

through interactions with chaperone proteins (cytosolic Hsp 70 family)

19
Q

import receptors of ______ complex bind signal sequence of incoming proteins

20
Q

chaperone proteins are ____ and unfolded protein is fed–signal sequence first into _____ channel

A

stripped off; translocation

21
Q

TOM transport protein across the outer membrane to where?

A

inner membrane space

22
Q

When a protein binds to TIM complex it moves through channel to where?

23
Q

What are signal sequences cleaved off by?

24
Q

Transport through TIM depends on ______

A

membrane potential

25
What helps in folding of imported protein using ATP?
HSP 60
26
What is the ER membrane continuous with?
nuclear membrane
27
What is the internal space of the ER called?
ER lumen
28
ER signal sequences vary in _____ ______ sequence
amino acid
29
ER signal sequences have how many non polar amino acids at its center?
8 or more
30
What two components guid ER signal sequence to ER membrane?
signal recognition particle (SRP) | SRP receptor
31
What is the SRP made of?
6 different polypeptides bound to a single small RNA molecule
32
The SRP is rod shaped with large _______ lined by ______
hydrophobic pocket; methionine