Innate Immunity (part 1) Flashcards
in most cases, the initial innate immune response to pathogens is
prevents, controls, or eliminates infection without an engagement of adaptive immunity
if the impact (pathogen load) is signifiant, innate immunity
1.
2.
- keeps the infection in check until more specialized adaptive immune responses are activated
- directs adaptive immunity towards either Ab-mediated or cell-mediated response
innate immunity eliminates host damaged cells and initiates the process of tissue repair that include:
- recognition of host molecules related by stressed, damaged, and/or dead host cells
- phagocytosis and clearance of cell debris
- stimulation and control of tissue remodeling
physical barriers of innate immunity
epithelial layers of skin and mocosal/glandular tissues
chemical barriers of innate immunity
acidic pH of skin (5.5) and anti-microbial proteins and peptides
if intracellular pathogen is present, what innate immune cell takes action
NK cell will kill cell –> releasing pathogens –> that are picked up by phagocytes
activated innate immune cells (e.g. macrophages) produce
- antimicrobial substances (peptides, interferons)
- cytokines and chemokines –> systemic effects (fever); inflammation (recruitment of other cells); and activation of adaptive immune responses
if pathogens overwhelm macrophages, what becomes active
dendritic cells which can then activate adaptive immune responses
opsonization
process by which the pathogen is marked for elimination
neutrophils
polymorphonuclear leukocytes (PMNs)
most abundant of circulating white blood cells
early phagocytosis and killing of microbes
natural killer (NK) cells
lysis of infected cells, activation of macrophages
TNF, IL-1, chemokines
inflammation
IFN-alpha-beta
resistance to viral infection
IFN-gamma
macrophages activation
IL-12
IFN-gamma production by NK cells and T cells
IL-15
proliferation of NK cells
Proliferation of T cells
IL-10, TFT-beta
control on inflammation
innate immunity have the ability to discriminate between _____ and _____
self
nonself
innate immunity discriminate between self and nonself by the mechanism involving _______ and their receptors called ______
pathogen-associated molecular patterns (PAMPs)
Pattern Recognition Receptors (PRRs)
PAMPs (pathogen-associated molecular patterns) have no structural similarity with
self Ags
general properties of PRRs (pattern recognition receptors)
recognize broad classes of pathogens
are encoded in germline (limited diversity)
can discriminate between self and nonself
mannose-tailed glycans are essential surface molecules of
bacteria and viruses
types of PRRs
mannose receptors
N-formyl methionyl receptor
toll-like receptor
general properties of PRRs (pattern recognition receptors)
specificity
receptors
distribution of receptors
discrimination of self and nonself
specificity: for structures shared by classes of microbes (‘molecular patterns’)
receptors: encoded in germline; limited diversity
distribution of receptors: nonclonal; identical receptors on all cells of the same lineage
discrimination of self and nonself: yes; host cells are not recognized or they may express molecules that prevent innate immune rxns
phagocytes use PRRs to help distinguish
self from nonself
PRR-triggered responses of phagocytes:
N-formyl methionyl peptide (fMet) is present in ______ but not in ______
prokaryotes
eukaryotes
polymorphonuclear cells (neutrophils) can bind proteins starting with fMet, and use them to control ______ and initiate ______
motility
phagocytosis
phagocytosis without activation, results in ______ infection
chronic
role of PRRs in phagocytosis
- microbes bind to phagocyte receptors
- phagocyte membrane zips up around microbe
- microbe ingested in phagosome
- fusion of phagosome with lysosome
- killing of microbes by lysosomal enzymes in phagolysosomes and killing by reactive oxidative species and nitric oxide synthase
Pattern Recognition Receptors (PRRs) groups
Toll-Like receptors
intracellular NOD-like receptors
scavenger receptors
lectin family of PRRs
some toll-like receptors (TLRs) are present on the cell surface of innate immune cells where they recognize products of ______ while other TLRs are located in endosomes that recognize which respond only to ______
extracellular microbes
nucleic acids
toll-like receptors that recognize extracellular pathogens
1, 2, 4, 5, 6
toll-like receptors that recognize intracellular pathogens
3, 7, 8, 9
toll-like receptor 2 recognizes
gram-positive bacteria
peptidoglycan
toll-like receptor 4 recognizes
gram-negative bacteria
lipopolysaccaride
toll-like receptors recognize pathogens and actviate
inflammation
each pathogen can be recognized by ______ TLRs
several
TLR1 : TLR2 heterodimer
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: lipopeptides; GPI
cells carrying receptors: monocytes, DC, eosinophils, basophils, mast cells
cellular location of receptor: plasma membrane
TLR2 : TLR6 heterodimer
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: lipoteichoic acid; zymosan
cells carrying receptors: monocytes, DC, eosinophils, basophils, mast cells
cellular location of receptor: plasma membrane
TLR3
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: double-stranded viral DNA
cells carrying receptors: NK cells
cellular location of receptor: endosomes
TLR4 : TLR4 homodimer
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: lipopolysaccharide
cells carrying receptors: macrophages, DC, mast cells, eosinophils
cellular location of receptor: plasma membrane
TLR5
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: flagellin
cells carrying receptors: intestinal epithelium
cellular location of receptor: plasma membrane
TLR7
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: single-stranded viral RNAs
cells carrying receptors: plasmacytoid DC, NK cells, eosinophils, B cells
cellular location of receptor: endosomes
TLR8
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: single-stranded viral RNAs
cells carrying receptors: NK cells
cellular location of receptor: endosomes
TLR9
ligands:
cells carrying receptors:
cellular location of receptor:
ligands: unmethylated CpG-rich DNA
cells carrying receptors: plasmacytoid DC, B cells, eosinoophils, basophils
cellular location of receptor: endosomes
signaling of extracellular TLRs always results in activation of transcriptional factor
NF-kB
nuclear factor - kappa light chain enhancer of B cells
what TLR uses TRIF dependent signaling?
what is downstream effect?
TLR3
activates NF-kB and Interferon regulatory factors (IRFs)
what TLR uses MyD88/TRIF dependent signaling?
what is downstream effect?
TLR4
activates NF-kB and Interferon regulatory factors (IRFs)
what TLR uses MyD88 dependent signaling?
what is downstream effect?
TLRs 1, 2, 5, 6, 7, 8, 9
activates NF-kB and Interferon Regulatory factors
broad outcomes of TLR-signaling
influence adaptive response
direct antimicrobial response (bacterial death)
tissue injury (host) - apoptosis of host cells; septic shock
TLR-dependent signaling pathways activate _______ and _______ which results in transcription of _______
NF-kB
IRF
pro-inflammatory genes
cytokine IL-12 produced by DCs (after phagocytosis of intracellular pathogen) controls
cell-mediated immunity via stimulating T cell response (activates T cells)
cytokine IL-12 is not produced by DCs (after phgocytosis of extracellular pathogen), and stimulates the development of
humoral adaptive immunity
activation of TLRs can also be detrimental to host:
they can contribute to tissue injury by _______
they can lead to life threatening symptoms of ______
inducing apoptosis in host cells
septic shock
TLR4 signaling pathway in macrophages
- complex of TLR4, MD2, CD14, and LPS is assembled at the macrophage surface (LBP delivers LPS to cell surface and MD2 and CD14 deliver LPS to TLR4)
- MyD88 binds TLR4 –> activates IRAK4 to phosphorylate TRAF6 –> phosphorylation and activation of IKK
- IKK phosphorylates IkB/NF-kB complex which leads to IkB degradation –> release of NFkB which then enters the nucleus
- NFkB activates transcription of genes for inflammatory cytokines, which are synthesized in the cytoplasm and secreted via the ER
nucleotide oligomerization domain (NOD)- like receptors (NLRs) are a specialized group of Pattern Recognition Receptors (PRRs) that recognize ______ proteins
intracellular
NOD like receptors (NLRs) act as scaffolding proteins that assemble signaling platforms that trigger_______ and _______ signaling pathways.
NF-kB
mitogen-activated protein kinase (MAPK)
NLRs respond to cytosolic PAMPs and DAMPs by binding other proteins and forming signaling complexes called
inflammasomes
these pathways control the activation of inflammatory ______
caspases
by recruitment to the complex, inflammasomes activate
caspase-1
main function of caspase-1 is to cleave the inactive cytosolic precursor forms of two homologous cytokines called
IL-1b and IL-18
secreted forms of proinflammatory cytokines IL-1b and IL-18 drive
inflammation
inflammasome activation (NLR activation) is induced by a wide variety of cytoplasmic stimuli that are often associated with infections and cell stress, including
microbial products (bacterial products)
environmentally or endogenously derived crystals
reduction in cytosolic potassium concentrations
reactive oxygen species
NLRP3 senses many DAMPs and PAMPs, including
uric acid crystals, aluminum hydroxide crystals used in vaccines, ATP released from mitochondria, silica, bacterial products, bacterial DNA-RNA hybrids, and the influenza virus
prolonged activation of NLRP3 inflammasome also causes _______ of macrophages and DCs called pyroptosis which releases inflammatory mediators including: IL-1b, IL-18, TNF, IL-6, and IL-8
programmed cell death
scavenger receptors are important in tissue remodeling after collateral damage due to
inflammation and infections
3 types of scavenger receptor (SR) family
Class A type I
Class A type II
MARCO (macrophage receptor with collagenous structure)
(are organized as trimeric complexes)
scavenger receptors have 3 distinct extracellular structural domains
- scavenger receptor cysteine-rich (SRCR) domain
- the collagen-domain (responsible for binding of polyanionic ligands)
- the alpha-helical coiled-coil domain
SR-AI and SR-AII mediate the uptake of _______ into cells which lead to atherosclerosis
oxidized lipoproteins
all SRs bind various bacterial constituents based on ______ charges on bacterial LPS, lipoteichoic acid, nucleic acids, beta-glucan, and proteins
negative
SRs are expressed on on macrophages and mediate ______ of microorganisms via recognition of PAMPs leading to clearance of pathogens
recognition/phagocytosis
SRs KO mice have an increased susceptibility to ______ with several microbial pathogens
infections
lectin family of PRRs are receptors for what macromolecule
carbohydrates
all lectin PRRs contain a conserved carbohydrate recognition domain for recognition of
microbial mannose, N-acetylglucosamine, and beta-glucans
some lectins are soluble proteins found
in the blood and ECF
some lectins are not soluble and are membrane proteins found on what cells
macrophages, DCs, and some tissue cells
eukaryotic cell carbohydrates are most often terminated by mannose or galactose and sialic acid
galactose and sialic acid
lectin receptors facilitate
phagocytosis of various microbes
activation of lectin receptors triggers the secretion of
cytokines that promote inflammation and adaptive immune responses
mannose receptor on phagocytes is involved in ______ of microbes
phagocytosis
soluble mannose-binding lectin (MBL) also known as mannan-binding protein (MBP) is involved in _______ activation via the lectin pathway
complement
PAMPs and DAMPs trigger
inflammation
necrosis
a passive, catabolic cell death in response to external toxic factors
dirty form of cell death characterized by swelling and rupture of cell membrane (cell lyse) which may cause inflammation or harm neighboring cells
what generates DAMPs
necrosis
inflammation
a response of the innate immunity that involves activation of leukocytes and release of inflammatory mediators
inflammation is innate reaction caused by:
- an increased blood supply to the affected area resulting in _____ and _____
- an increased capillary permeabilty resulting in leaking from the blood vessels, resulting in _____ and ______
- a massive influx of ______ into the tissue
- an arrival of _______ (16-48 hours)
- distortion of the homeostasis and ______ of function
- redness and heat
- swelling and pain
- neutrophils
- monocytes/macrophages
- loss
T/F
DAMPS act through same receptors and PAMPs
True
DAMPs activate
NF-kB
necrotic cells release what DAMPs
HMGB1: activates NF-kB pathway; RAGE is receptor for HMGB1
Uric acid: activates NF-kB pathway
HSP (heat shock proteins): activate NF-kB pathway and release of inflammatory cytokines (TNF-alpha and IL-1beta)
epithelia at the portals of entry of microbes provide physical barriers, kill microbes by producing _______ , and harbor intraepithelial ______ that kill microbes and infected cells
antibiotics (defensins and cathelicidins)
lymphocytes
the rapid movement of intestinal contents through peristalsis, secretion of mucus by _______ cells, and release of extensive antimicrobial products into the lumen by _______ cells all function to limit the invasion of pathogenic organisms
goblet
paneth
defensins (antimicrobial peptides) are small cationic peptides that contain both _____ and _____ regions
cationic
hydrophobic
defensins are produced by ______ cells of mucosal surfaces and by granule-containing leukocytes including ______
epithelial
neutrophils, NKcells, and CTLs
synthesis of defensins are stimulated by ______ and microbial products via ______
cytokines (cytokine receptors)
PRRs
defensins have direct toxicity to microbes, including:
bacteria, fungi, and enveloped viruses
defensins kill microbes by
inserting into and disrupting functions of the microbial membranes
cathe’licidins (antimicrobial peptides) are produced by ______ and barrier ______ cells in the skin, gastrointestinal tract, and respiratory tract
neutrophils
epithelial
synthesis of cathe’licidins may be stimulated by _____ and microbial products
cytokines
cathe’licidins have multiple mechanisms, including ______ to microorganisms and the activation of ______
direct toxicity (disrupting plasma membrane)
leukocytes
some cathe’licidins can bind and neutralize
LPS
some cathe’licidins play an anti-inflammatory role by binding to DNA and blocking
inflammasome activation
NK cells recognize ligands on
infected cells or stressed cells
NK cells eliminate reservoirs of infection and thus release intracellular pathogens for
phagocytosis
NK cells kills host cells by _____ releasing pathogens for phagocytes
apoptosis
NK cells respond to _____ produced by macrophages (with phagocytosed microbes) and secrete _____ that activates the macrophages to kill phagocytized microbes
IL-12
IFN-gamma
NK cell Activating Receptors (KARs) are called killer cell immunoglobulin (Ig)-like receptors that recognize stress-associated molecules ( _____ and _____ ) on the surface of abnormal host cells
MICA and MICB
activating receptors of NK cells trigger activation of what kinases?
protein tyrosine kinases
NK cell Inhibitory Receptors (KIRs) recognize _____ and activate protein tyrosine phosphatases (PTP) and inhibit an activation signal
class I MHC
if insufficient KIR-MHC I binding occurs, the NK cell will proceed to
kill the target host cell
sufficient binding by KIRs will override the KAR kill signal and
spare the life of the host cell
how do NK cells kill enemy cells
- NK cell releases perforins, which polymerize and form a hole in the enemy cell membrane
- Granzymes from NK cell enter perforin hole and degrade enemy cell enzymes
- enemy cell dies by apoptosis
- macrophage engulfs and digests dying cell