imprinting disorders Flashcards

1
Q

why are gynogenetic or androgenetic diploids inviable?

A

due to genomic imprinting

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2
Q

what side is IGF-11 controlled by?

A

paternal side- is maternally imprinted

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3
Q

what side is IGFIIR controlled by?

A

maternal side

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4
Q

what phenotype to mice with a IGF11 mutation transmitted down the paternal line have?

A

growth defects

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5
Q

what is maternal imprinting?

A

allele inherited from the mother is transcriptionally silent, phenotype is governed by paternal side

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6
Q

what two situations can lead to imprinting diseases?

A

both copies of the gene are silenced or mutations in the expressed alllele

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7
Q

what causes Beckwith-Weirdemann syndrome?

A

maternal igf2 allele on chromosome 11 is not silenced due to imprinting defect in IC1. hypomethylation at potassium channel DMR region

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8
Q

what are the symptoms of BWS?

A

pediatric overgrowth, predisposition to tumours

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9
Q

inheritance pattern of BWS?

A

paternally inherited

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10
Q

symptoms of anglemans?

A

development difficencies, sleep disorders, seizures

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11
Q

inheritance pattern of anglemans?

A

maternally inherited, paternally imprinted chromosome 15

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12
Q

genetic causes of anglemans

A

deletions of PW region, point mutations in maternal UBE3a or paternal UPD

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13
Q

symptoms of prader willi

A

obesity, behaviour and cognitive problems

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14
Q

inheritance pattern of PW

A

paternally inheirted, maternally imprinted chromosome 15

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15
Q

genetic causes of PW

A

70% PW region deletion, 25% maternal UPD, mutations in ICR or translocations that separate ICR from PW region

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16
Q

symptoms of silver russel

A

pre and postnatal growth retardation, small triangular face, sweaty head and cardiac defects

17
Q

genetic causes of silver russel

A

maternal UPD of chromosome 7, maternal duplication of 11p15, hypomethylation of telomeric 11p15 IC- supresses IGF2 expression

18
Q

what is H3K14ac a docking site for

A

bromo-domain proteins

19
Q

what genes are associated with birth size?

A

paternally expressed IGF2 and maternally expressed H19

20
Q

why does epigenetic reprogramming take place in PGCs

A

resets imprinted genes for sex-specific reacquision, erases parental acquired epigenetic memories, facilitates gametogenesis, maintains silenicing of transposbale elements, reduces germline mutation rate

21
Q

why does reprogramming take place in pre-implantation embryo

A

resets zygotic marks for naive pluripotency, maternal v paternal genome wars- allows more contribution from females

22
Q

how are PGC epigenentic memories erased?

A

global DNA demethylation, genomic imprint erasure, x chromsoomes reactivation and reorganisation of histones

23
Q

after pGC development what happens to XY and XX germ cells?

A

XY enter mitotic arrest, XX enter meiosis

24
Q

when does remethylation occur in males and females?

A

in SSCs in males and after birth in growing oocytes in females

25
Q

what happens to ICRs in PGC resetting?

A

imprints erased and resestabilished in sex specific manner later in development

26
Q

how are embyros reset in females?

A

through replication dependent passive mechanisms- PRDMI and PRDM14 repress DMNT3a and b and UHRF1. UHRF1 normally activates DNMT1

27
Q

how are embryos reset in males? a

A

active mechanisms- 5mC converted to 5hmC by TETs then removed in passive way or by base excision repair

28
Q

how may imprints escape erasure during embryo restting?

A

these regions have higher numberrr KAP1 binding regions and may recruit DNMT1

29
Q

why did dolly die young?

A

no restting of epigenetic marks, would not be pluripotent, demethylated in a non-speicifc and delayed way.

30
Q

steps in artificial gamete production

A

1perform SCNT on somatic cell and induce embyro development in vitro
2. extract ESC from blastocyst
3 induce gametogenesis in vitro
4 use gamete to fertilise partners egg/sperm
5 develop embryo and implant into mother

31
Q

what are man made mouse eggs made from?

A

in vitro system of generating a mouse oocyte from fibroblast derived pluripotent stem cells

32
Q

how are bimaternal mice made?

A

oocyte activated, isolate parthenogenetic haploid ESCs, demethylate cells in media- loss of methylation non-specifc, then delete paternally imprinted regions- found that deleting 3 regions made basically normal mice, then implant haploid ESC into mature oocyte

33
Q

how are bipaternal mice made?

A

mature oocyte enucleated and fertilised with sperm, androgenetic haploid ESCs isolated, demethylate in media, deleting 6 maternally imprinted regions still resullted in death, then coinject haploid ESC and sperm into enucleated oocyte.