Immunology Flashcards
Innate immunity
Innate immune defences consist of:
• physical barriers such as mucosal epithelium;
• secretions with antibacterial activity, including
lactoferrin;
• phagocytic cells: monocytes, macrophages and
neutrophils;
• NK cells (lymphocytes capable of non-MHC restricted killing);
• soluble mediators which can enhance the activity
of innate and specifi c responses: C-reactive protein (CRP), mannose-binding lectin (MBL),
cytokines; and
• soluble enzymic cascades such as the complement system, which is activated directly by exposure to pathogens and serves to directly lyse the pathogen, or to enhance and target the activity of innate and specifi c effector cells by opsonisation and activation via cell surface receptors for complement components.
Adaptive immune response (See diagram)
Specific (adaptive) immune responses are more effective than innate ones and are mediated by lymphocytes and antibodies which amplify and focus non-specific responses and provide additional effector functions. These cells are organised into lymphoid tissues. Humoral immunity often refers to the antibody arm of the specific immune response. Cellular (cellmediated) immunity refers to lymphocyte-mediated effector responses (T helper (Th) and cytotoxic cells) of the specific immune response. These two arms of the specific immune response are not really separable, since antibodies are usually not produced without some cell-mediated response to the same antigen and vice-versa. T and B lymphocytes possess infi nitely variable antigen receptors which can clonally expand.
Antigen receptors which can be secreted into interstitial fluid and onto mucosal surfaces are called antibodies. Antibodies can activate complement and also enhance opsonisation of antigen to facilitate phagocytosis. Both innate and adaptive mechanisms exponentially amplify the immune response, since clonal expansion of lymphocytes increases the number of cells reactive
with an antigen. Cytokines and complemen components recruit other immune effector mechanisms and antibodies activate complement and phagocytes.
Complement
The complement system is a soluble enzymic cascade which focuses and amplifi es the activity of the specific and innate immune systems as well as having lytic activity against bacteria (Fig. 6.3). It is part of the innate defences since it has no intrinsic antigen specificity.
The complement cascade has a fi nal common pathway which leads to the insertion of a multimeric poreforming structure (membrane associated complex (MAC) consisting of complement components C5-9) into bacterial cell membranes, leading to osmotic lysis.
The production of this lytic complex is achieved via
two mechanisms called the classical and alternative
pathways. Inability to generate the MAC complex
leads to particular susceptibility to infections with
Neisserial organisms causing recurrent meningitis.
Classical pathway
The classical pathway is triggered by antigen-antibody immune complexes which bind circulating complement factor C1q to the Fc region of the antibody tail, which has undergone conformational changes as a result of antibody binding. The resultant sequential activation of complement proteins results in the formation of a C3 convertase (C4b2b) which cleaves C3, thus forming a C5-convertase (C4b2b3b) which catalyses the production of the C5-9 pore-forming complex.
In the process, C2, C3 and C4 are split into fragments, the smaller of which (C2a, C3a, C4a) are chemotactic and the larger of which (C3b, C4b) bind to immune complexes to opsonise or solubilise them, or to a pathogen surface to opsonise it. Thus multiple effects ensuing on other effector mechanisms are caused as a result of complement activation. CRP and MBL can directly activate the classical pathway of complement without the intervention of immune complexes.
The lectin pathway is very similar to classical pathway complement, with MBL binding to mannose on patho gens, which is then sequentially bound by MASP to form a C3 convertase.
Alternative pathway I
The alternative pathway is phylogenetically older than the classical pathway and is triggered by contact with exposed bacterial capsules without the need for prior antibody production. Factors B and D (analogous to the classical pathway C4 and C2) again lead to the production of a C3 convertase (C3bBb) and a C5 convertase (C3bBb3b), leading to opsonisation, chemotaxis and the final common pathway in a similar way to the classical pathway.
Complement activation is closely regulated by
various factors, because uncontrolled complement
activation would lead to tissue injury and infl ammation.
Alternative pathway II
C1-inh is the plasma inhibitor of fi rst component of complement. It is also the major plasma inhibitor of activated Hageman factor (the fi rst protease in the contact system) and of plasma kallikrein (the contact system protease that cleaves kininogen and releases bradykinin).
This diagnosis should be considered in patients presenting with recurrent abdominal pain where C4 levels are low. Acute management is with intravenous C1 inhibitor replacement, prophylaxis by increasing production with danzole,
or decreasing consumption by tranexamic acid. New inhibitors of bradykinin are in development.
Examples of diseases caused by abnormalities of complement control
Examples of diseases caused by abnormalities of complement control include:
C1 esterase inhibitor deficiency (hereditary angioedema)
C3 nephritic factor in type 2 MPGN, factor H deficiency in familial HUS.
Hereditary angioedema (HAE) is a rare autosomal dominant disorder of C1 inhibitor (C1-INH) deficiency.
Deficiency leads to uncontrolled complement and
kallikrein activation resulting in edema of subcutaneous or submucosal tissues. Acute abdominal pain, nausea, and vomiting are the dominant symptoms in 25% of patients with HAE.
The presentation may mimic an acute abdomen
with peritonitis and effusions and many have had
invasive surgical investigation before diagnosis.
Antigen
An antigen is any substance which can elicit a specific immune response. An antigen consists of many epitopes. An epitope is a specifi c sequence of a protein or carbohydrate recognised by the receptor molecules of the immune system (antibody or T cell receptor).
Antigens can be divided into foreign (non-self, allogeneic, xenogeneic, etc.) and self-antigens (autoantigens). Although an antigen usually elicits an immune response, if the antigen is encountered in appropriate circumstances the specific immune response may be switched off by a variety of mechanisms which will be important to consider when discussing the immunology of transplantation and autoimmune diseases.
Antibodies
An antibody is a soluble protein immune receptor produced by B lymphocytes, consisting of two identical antigen-binding sites (Fig. 6.4). The antigen specificity of the antibody resides in the antigen-binding variable regions (the fragment antigen-binding, Fab, portion).
Antibodies are divided into different isotypes (classes) which have different functional attributes due to the Fc (fragment constant) tails coded by the constant region genes of the heavy chain; thus different constant region genes produce different antibody classes.
Antibodies which bind to antigen or cells and activate complement via the Fc region thus recruit, activate, amplify and target non-specifi c defence mechanisms. Up to 1010 different antibody specifi cities may be produced in any individual. This is achieved by joining multiple different copies of genes encoding the variable regions of heavy and light chains of the immunoglobin.
Somatic recombination I
Somatic recombination of the gene segments (V, D and J region genes) leads to generation of diversity and broad repertoire of antibody specificities. The antigen binding variable regions are further (infi nitely) diversified by a combination somatic hypermutation which results from random mutations to the V genes in the hypervariable regions (mutation hotspots) and to the joins between V, D and J genes, enabling antibodies to be produced which can bind to virtually any natural or synthetic antigen encountered. Each cell producing antibody which binds an epitope of an antigen is stimulated to clonally reproduce, and thus further amplification of the immune response occurs with the progeny of each cell producing exactly the same antibody but many different clones expanding.
Somatic recombination II
Most antibody immune responses are polyclonal
(many cell clones expand, each recognising different, sometimes overlapping, epitopes on the antigen); oligoclonal responses occur when a limited number of clones expand for some reason (e.g. prolonged infl ammation); monoclonal proliferations are usually representative of malignant transformation of a single
clone of a B cell at some point in its differentiation
(early or late B cells = lymphoma, and often produce IgM; terminally differentiated plasma cells = myeloma and usually produce IgG/A isotypes).
The antigens recognised by antibodies are often
conformational (that is, they require a folded 3D structure for recognition), often bringing widely separated areas of a larger molecule together to form the epitope (which is, therefore, discontinuous in linear sequence, unlike the epitopes recognised by T cells). Antibodies thus tend to recognise native folded-3D structures.
Somatic recombination III
Most antibody production is ‘T cell dependent’ (i.e.
very inefficient in the absence of T cells, which recognise linear epitopes on the same antigen as that recognised by the antibody and provide ‘help’ (co-stimulation to amplify responses) to B cells,). A small number of relatively ‘T-independent’ B lymphocytes exist which bear the CD5 surface antigen. They tend to recognise conserved
carbohydrate epitopes on pathogens (including
human ABO blood groups), produce IgM and may represent a phylogenetically older type of B cell defence.
Isotypes and subclasses I
B lymphocytes initially produce IgM upon a primary
encounter with antigen; this is very efficient at complement fixation and opsonisation, but IgM circulates as a large pentameric (fi ve antibody molecules) structure with a short half-life (!fi ve days). Subsequently an individual B cell will undergo a class-switch to IgG, IgA, or IgE production, but class-switching depends
on effective T cell help following T cell recognition of an epitope on the same antigen.
Memory develops in parallel with the class switch. Both these processes require effective communication between B-cells, Antigen Presenting Cells (APC) and T cells (mediated by CD40–CD40L interaction).
Isotypes and subclasses II
IgG diffuses well into extracellular spaces and can neutralise circulating viruses and bacteria (prevent binding by blocking receptors), opsonise via complement or Fc receptors or lyse via complement activation. IgG is divided into four subclasses (IgG1, IgG2, IgG3, IgG4) which have different Fc regions (and thus are coded by different heavy chain constant region gene segments).
These classes and subclasses have different half lives and abilities to fi x complement, or bind Fc receptors (Table 6.3). There are several different types of Fc receptors (FcRI or CD64, FcRII or CD32, FcRIII or CD16) which bind some IgG subclasses better than others and are distributed differently on each effector cell type. IgG1 constitutes 60–70% of the circulating IgG in man;
IgG2 constitutes 20–40%. IgG3 constitutes 15–20%.
Isotypes and subclasses III
IgG4 circulates in trace amounts and its functional signifi cance is unknown, although it may be important in IgE-mediated antiparasite and allergic responses. IgG1 and IgG3 tend to be produced in response to protein antigens; IgG2 in response to polysaccharide antigens (such as those of bacterial capsules).
IgA is secreted preferentially onto mucosal surfaces and is important in prevention of initial adherence to epithelium or mucosal penetration (blocks interaction with cell surface receptors) of bacterial and viral pathogens spread via respiratory or gastrointestinal routes. IgA defi ciency thus predisposes to mucosal infections.
The gut contains peptidases which degrade IgG and IgM rapidly. IgA is protected from destruction by a remnant of the polyIg receptor (which selectively transports secretory IgA across epithelium to the outside of the mucosal surface) called the secretory component, and IgA is usually secreted as a dimer joined by a j(oining)-piece. Most secretory IgA is of the IgA2 subclass; most
circulating in serum is IgA1. The signifi cance of this is uncertain. Unlike most IgG subclasses or IgM, IgA does not effi ciently fi x complement via the classical pathway of complement activation.
Antigen presenting cells I
In contrast to antibodies, T cells can not recognize
native antigens. They recognise short linear peptides on the surface of APC which digest the whole antigen and present the fragments on the surface in the grooves of major histocompatibility complex (MHC) Class I or II molecules (MHC restriction). The initial interaction of T-lymphocytes with antigen is important in determining whether a specific immune response is promoted or suppressed.
The default pathway in unprimed ‘naive’ cells (which have not encountered specific antigen before) is either to become specifically unresponsive to the antigen (anergy) or to die (apoptosis) if the antigen is encountered in an insufficiently stimulating context. Naive T lymphocytes are relatively refractory to stimulation, and require potent signals to activate them to clonally proliferate and/or become effector cells. This usually occurs centrally in the lymph nodes, bone marrow or spleen, but can occur elsewhere. These extra signals are complex and multifactorial but act in addition to the recognition of antigenic peptide in the MHC groove by the T cell receptor (TCR) on the CD4 or the CD8 T cell.
Antigen presenting cells II
In addition to the recognition of antigenic peptide in the MHC groove by the T cell receptor (TCR) on the CD4 or the CD8 T cell.
This incorporates adhesion molecules which stabilise contact between lymphocyte and APC, and costimulator molecules which provide activation signals to the T cell from the APC (Immunological Synapse – cf. neurological synapse). Important interactions occurring at the immunological synapse are shown in Table 6.4.
APC of several different types provide these second signals while presenting a processed fragment of antigen to a lymphocyte. Primary stimulation of naive T cells requires a potent professional APC (such as the Dendritic cell (DC) or an activated B lymphocyte) with potent stimulatory capacity and ability to acquire and process (digest) antigen by phagocytosis or endocytosis. Secondary restimulation of recently activated or memory T cells is less stringent and can occur on non-professional APC which are not potent enough to stimulate naive cells effectively, e.g. activated endothelium or monocytes and other cells expressing MHC Class II molecules.
Antigen presenting cells III
‘Professional’ APC such as DC are resident as sentinels in the skin (Langerhans’ cells) or in the interstitium of most tissues (interstitial DC) including lymph nodes (interdigitiating DC). On encounter with antigen, DC become activated (mature) and migrate centrally via lymphatics to become resident in the T cell areas of lymph nodes (paracortical area) as interdigitating cells. There, T cells recirculating through lymph nodes via lymphatic drainage encounter antigen and clonally proliferate, if they carry the appropriate antigen-specifi c TCR. Subsequently they migrate back to the peripheral tissues and elicit a local immune response. Similar processes occur in the spleen and Peyer’s patches. B cells may also be stimulated directly by DC.
T Lymphocytes
T cells recognise antigen fragments on the surface of APC which express MHC Class I and II molecules on the surface. MHC molecules have an antigen-binding groove on the surface which can bind antigen fragments of 9–11 amino acids (MHC Class I) or 14–20 amino acids (MHC Class II) in length. Thus they act as display platforms on which the TCR can recognise antigen, but because they bind antigen fragments themselves, the MHC molecules also influence the immune responses in any individual since each MHC type will bind some antigens better than others, and occasionally won’t bind some antigens at all.
T Lymphocytes: TCR
The TCR binds to a part of the lips of the groove as well as the antigen fragment. Thus the TCR is also self restricted (MHC Restriction), since it binds only to the combination of [self antigen (MHC) + foreign
antigen]. A T cell will not operate effectively with nonself APC which bears different MHC molecules. They can, however, co-operate with non-self cells provided they express the same MHC molecules (as they have to do in allogeneic bone marrow transplantation where the BM is donor-type and the recipient is host-type).
T Lymphocytes: MHC (i)
MHC Class I is bound by CD8, and MHC Class II by CD4 on the T cell surface (Fig. 6.5). Virtually every nucleated cell expresses MHC Class I on the surface, but MHC Class II expression is restricted to certain cell types (e.g. Professional APC, B lymphocytes) especially when the cell is activated. APC express MHC Class II in high density and thus are the major activators of CD4 positive lymphocytes. MHC Class I restricted CD8 positive T cells are also stimulated by APC, but they recognize foreign peptides (e.g. viral, intracellular
bacteria) on all nucleated cells by ‘seeing’ viral antigen in the surface groove of self-MHC Class I, and are activated to deliver a lethal attack on the cell.
Not surprisingly, viruses have adapted to reduce MHC Class I surface expression (e.g. adenovirus) and can partially evade their attentions (NB NK cells recognize this lack of MHC class I as a sign of an infected cell). Degraded intracellular antigens in the cytosol tend to get access to the MHC Class I groove in the process of MHC assembly in the endoplasmic reticulum, and thus responses to intracellular antigens tend to occur via the MHC Class I pathway (Fig. 6.6).
T Lymphocytes: MHC (ii)
Extracellular antigens from bacteria phagocytosed and digested in the lysosomes of APC tend to gain access to MHC Class II most (readily since the assembly pathway of MHC Class II molecules intersects with the lysosomal pathway). Thus degraded extracellular antigen gains access to ‘empty’ MHC Class II molecules after the invariant chain (which occupies the MHC groove prior to antigen binding in order to let the molecule pre-assemble without antigen) is displaced by alterations in the intralysosomal pH. All T cells have CD3 and TCR complex on their surface. The T cell receptor requires various co-receptor molecules (LFA-1, CTLA-4, CD28, CD40L) to be associated with it on the cell surface in order to enable
effi cient antigen recognition and signalling from
antigen-presenting cells. Therefore any T cells lacking these co-receptors will fail to function normally.