Human Molecular Genetics Flashcards

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1
Q

Diseases caused by genetic components

A

Thousands of diseases and disorders mainly caused by genetic components
single mutations can lead to dramatic and severe changes in the phenotype

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2
Q

How do we know this?

A

twin studies
family and admixture studies indicate T2 diabetes has genetic component

strong evidence for inheritance- T2 not just reliant on environment

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3
Q

Define: Dominant mode of inheritance

A

vertical patterns of affected individuals

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4
Q

Define: recessive mode of inheritance

A

horizontal patterns of affected individuals

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5
Q

Define: autosomal recessive mode of inheritance

A

consanguinity often present between parents

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6
Q

Define: autosomal mode of inheritance

A

males and females affected with equal probability

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7
Q

Define: X-linked recessive mode of inheritance

A

males affected, females carriers

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8
Q

Define: X-linked dominant mode of inheritance

A

all daughters of males affected

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9
Q

Define: mitochondrial mode of inheritance

A

non-mendillian, maternal inheritance

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10
Q

What is consanguinity?

A

blood relation
property of being from the same kinship as the other person

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11
Q

How do you recognise autosomal dominant pedigree analysis?

A

easiest
every affected individual has an affected biological parent
no skipping of generations
males and females equally likely

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12
Q

How do you recognise autosomal recessive pedigree analysis?

A

males and females equally likely
reccurance risk of unborn sibling = 1/4
trait found in siblings
parents of affected may be related
trait may appear isolated (sporadic event)

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13
Q

How do you recognise X-linked recessive pedigree analysis?

A

disease never passed from father to son
males more likely
all affected males are related through their mothers
typically passed from affected grandfather, through carrier daughters, to half grandsons
may be lethal in males

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14
Q

How do you recognise mitochondrial pedigree analysis?

A

everyone inherits through the maternal line

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15
Q

What are the complications that affect interpretation of pedigrees?

A
  1. New mutations
  2. Penetrance
  3. Expressivity
  4. Delayed onset
  5. Anticipation
  6. Imprinting
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16
Q

How do you identify a diseased gene?

A

work backwards for root of disorder

17
Q

What is positional cloning?

A

disease will correlate with a visible chromosomal deletion or rearrangement

spreading out the karyotype and relating to those who suffer genetic disorders

18
Q

What markers can be used to help map diseased genes?

A

phenotypic markers
- genetic disorder

molecular markers
- structural arrangements
- copy number variations
- INDELs

19
Q

What is the statistical analysis for linkage analysis?

A

log odds scores

lod score = odds loci linked / odd loci unlinked

> = 3 indicates not linked

  1. establish pedigrees
  2. number of estimates of recombination frequency
  3. calculate lod score of each estimate
20
Q

What are GWAs?

A

Genome wide association studies

study large proportion of common human variation in one experiment
genotypes for common SNPs

21
Q

What are some examples of GWAs?

A

Age related macular degeneration
Height
Obesity

22
Q

What are the gene variations in obesity?

A

identified risk allele for obesity
carriers of gene weighed 1.2kg heavier than those without
carriers of 2 copies weight 3kg heaver

obesity major risk factor for developing diabetes

23
Q

Is the obesity epidemic environmental or genetic?

A

100% environmental
gene pool change very little over the same period

twin studies show body mass has genetic component

so where people lie is >50% genetics