host pathogen co-evolution Flashcards
epidemiology
the study of distribution and determinants of disease
morbidity vs mortality
morbidity: condition of suffering from a disease or medical condition, measure the rate of disease in a population (think “co-morbidities” dont kill ppl it just means they have something)
mortality: measure rate of death (mortal = limited life)
case fatality rate
measure of death by a specific disease
pathogen
an organism that causes disease. viruses, bacteria and other microbes.
can be facultative (the host is only one niche it can exploit to reproduce) or obligate (require hosts to fulfill life cycle)
Host
living organism that acts as a harbour for invading pathogenic organisms. obtains nutrition and shelter
co-evolution
evolutionary changes that occur within 2+ organisms as a response to interactions between them, and the mutual selective pressures that those interactions cause
mode of transmission
how an infectious agent/pathogen can be transferred to a person, object, animal, etc.
direct transmission
pathogen spreads from one host to another host
respiratory, fecal-oral, sexual, congenital, direct contact
indirect transmission
requires an intermediary host or agent to facilitate transmission of the pathogen between humans
food-borne, soil-borne, vector-borne
zoonotic disease
disease of other animals that occasionally infect humans
what are pathogen-immune system strategies
- killed by innate immune defences
- resistant to innate but killed by adaptive immune defences
- resistant to adaptive
R-naught
R0- basic reproductive number of pathogen
expected number of cases generated by one case
measure of how contagious it is
good measure of fitness in endemic diseases. selection favours early transmission and higher R0
genes that improve infectivity may increase or decrease virulence
must balance host survival and pathogen infectivity and virulence
host and pathogens evolve differently, how?
hosts evolve to minimize fitness cost (virulence) of pathogen infections.
pathogens evolved to max their fitness, which means evolving traits that max their R0
pathogen virulence isn’t selected for, but is a byproduct of co-evolution
Red queen hypothesis
species must continuously evolve just to keep up with each other
pathogens are under selection to infect more hosts, hosts are under selection to avoid infection
rare host genotype may have selective advantage, eventually this genotype will be common as they outcompete others
dead end evolution
within host selection leads to growth of pathogens in critical organs and to increase in virulence even though it doesnt contribute to infectivity
kills host before it can spread the disease