Histology- Assessment 1 Flashcards
what do aldehyde fixatives do?
cross link- create covalent bonds between proteins
what do alcohol fixatives do?
precipitate proteins which leads to precipitation and aggregation of proteins
what is NBF?
neutral buffer formalin
an aldehyde that irreversibly cross links proteins at amino groups
what is lost if NBF is used?
ions, mRNA, miRNA, and DNA
what are mercurials good for and why?
immunological specimens because of a slower rate of penetration, get good nuclear preservation in lymphocytes
what is an oxidizing agent? what does it bind to?
secondary fixative used in EM, binds to phospholipids to preserve the membrane
what is an example of an oxidizing agent?
osmium
what is osmium stain used for?
nerves
what is picrate fixative?
precipitating
what affects fixation?
pH osmolarity specimen size fixative volume temperature duration time from removal to fixation
what are some examples of artifact?
specimen shrinkage or swelling
poor penetration
what happens to large macromolecules in fixed samples? what are some examples?
aggregate
nucleoproteins, intracellular cytoskeletal proteins, extracellular proteins, membrane phopholipid-protein complexes
what tissue components are lost during fixation?
ions, glycogen, small proteins, nucleic acids
how is water removed from a specimen?
series of dehydrations
water removed with ethanol
ethanol removed with xylene
then paraffin added
what happens after paraffin is put into a specimen?
thin sections are cut into a ribbon using a microtome
ribbon floated onto a slide
slide baked
after the specimen is on the slide, what next?
paraffin removed by reversing the dehydration process
stained with water soluble dye, dehydrated, stain with ethanol soluble dye
what do acidic dyes bind to?
positive things because they are negative
what is eosin?
an acidic dye that binds to cytoplasmic filaments, intracellular membrane components, and extracellular fibers (positive things)
pink
what do basic dyes bind to?
negative things because they are positive
what is hematoxylin?
a basic dye that binds phosphate groups on nucleic acids, sulfate groups on GAGs, and carboxyl groups of proteins (negative things) *requires an additive pH dependent high pH- binds all groups 5-7- sulfate and phosphate groups <5- sulfate only purple
what does hematoxylin stain?
heterochromatin, nucleoli, cytoplasm with lots of mRNA, ECM cartilage
what is enzyme digestion used for?
as a positive control- destroy what you are staining to make sure you are staining the right thing
what is enzyme histochemistry?
stains the reaction product with a heavy metal
what is immunohistochemistry?
using fluorescent stains to visualize things
direct and indirect methods exist
what is hybridization?
when ssRNA or ssDNA interact with complimentary sequences
detected with radioactive probes of fluorescent dyes on the sequence that will bind to the target sequence
what is FISH?
fluorescent in situ hybridization
used to screen for trisomy 21
what is a benefit of using frozen tissue preparation?
preserves lipid droplets
what does a teased preparation look like? what is it used for?
little strings that are pulled apart
nerves
what does a smear look like? what is it used for?
used for blood, smear sample across to get single layer of cells
what is a spread?
use the whole sample, spread out on a slide
what is a tissue microarray?
up to 1000 samples run at the same time to compare them quickly
what is confocal scanning microscopy?
take many image slices through a sample to reassemble to get a 3D image
what is 2 photon microscopy? what are benefits of using it?
multiple, low energy photons shot at a sample and a photon is emitted
gives clearer points than fluorescence microscopy
prevents tissue damage
what is second harmonic generation microscopy? what is it used for?
photons combine to form higher energy photon when shot at a non linear material
used to determine tumor rigidity
what is TEM?
transmission electron microscopy
sample stained with osmium after being sectioned in plastic
electrons shot at sample and deflection is measured
gives 2D image
what is SEM?
scanning electron microscopy
stain sample after critically drying it
electron beam rasters over the sample and generates a 3D image of the surface topography
what is freeze fracture?
freeze samples and fracture along lipid bilayers to see inside the membrane
what is the e face in freeze fracture technique?
ectoplasmic face- inner membrane
what is the p face in freeze fracture technique?
protoplasmic face- cytoplasm membrane, very bumpy because you can see all the stuff in the cell
what is serial block face SEM?
remove small layers and image each time to reconstruct a 3D image
what is atomic force microscopy used for?
stiffness determination
what are microfilaments used for?
actin- cell movement
what are intermediate filaments used for?
structure maintence
what are microtubules used for?
moving organelles
which end of actin (microfilaments) grows slowly? fast?
pointed end (-) slow growing barbed end (+)- fast growing
what does phallodin stain?
actin
what is non muscle myosin?
same structure as muscle myosin, but used for cell movement
appears as a zigzag pattern inside the cell
how is non muscle myosin regulated?
phosphorylation of regulatory light chain- induces polymerization
phophorylation of myosin heavy chain- inhibits chain interaction
what is the structure of microtubules?
13 alternating chains of alpha and beta subunits in a ring
gamma subunit is used as regulatory
what energy molecule is associated with microtubles?
GTP
in what direction do microtubules grow?
positive end
anchored at negative end
in what structure are microtubules found as a ring of pairs?
cilia
in what structure are microtubules found as a ring of triplets?
centriole
what direction do kinesin proteins move? what do they move on?
retrograde along microtubules
what direction do dynesin proteins move? what do they move on?
anterograde along microtubules
what is the most stable cytoplasmic filament? most dynamic?
stable- intermediate filaments
dynamic- microtubules
what is the structure of intermediate filaments?
alpha helical monomers form coiled coil dimers which associate to form a tetromer that then packs antiparalelly
what is endocytosis?
bringing something into a cell
what is pinocytosis
slightt invagination without clatherin involvement
what is phagocytosis?
antibody binds and antigen and triggers it be brought in
what is receptor mediated endocytosis?
something has to bind a receptor for endocytosis to occur
what stains rough ER?
basic dyes- eosin (blue)
where are simple squamous cells found?
blood vessel lining
air interface in lung
kidney loop of henley
visceral coverings of organs
where are simple cuboidal cells found?
ducts, kidney tubules