Heteroaromatic Chemistry Flashcards
Why is benzene stable?
Due to delocalisation of e-
When does aromaticity occur?
Compound has uninterrupted cyclic cloud of p e- above + below plane of planar molecule
What should the e- cloud contain in aromaticity?
Odd number of pairs of p e-
What is Huckel’s rule?
For planar, cyclic compound to be aromatic must contain uninterrupted p cloud with 4n + 2 e-
What are examples of heterocycles in nature?
DNA
Haemoglobin
What is a heterocycle?
Any ring containing at least 1 heteroatom (NOT C)
What are some heteroatoms?
N
O
S
What set of hybrid orbitals are in benzene?
sp2
What do the p-orbitals in benzene generate?
Pi network
How is the pi system formed?
Each p e- is delocalised over 6 Cs creating pi system above + below plane of hexagon
What is pyridine?
Derived from benzene
CH is replaced with a sp2 hybridised N atom
Why is there a permanent dipole towards N in pyridine?
Inductive effects + resonance work in the same direction
What does the N do in pyridine?
Pull e- towards itself
= more electronegative than C
Where are pyridine’s partial positive charges?
Alpha position
Gamma position
What are the alpha positions?
2 + 6
What are the gamma positions?
4
What is pyridine termed as?
“Electron poor”
OR
Pi deficient system
What does the electronegative N in pyridine cause?
Inductive polarisation = additional structures = resonance
What is the pKa of pyridine?
5.2 = WB
What does in the N in pyridine make it?
Basic
NOT the reason for it being aromatic
Can pyridine undergo electrophilic aromatic substitution?
YES, BUT harder than with benzene
What are the physiochemical properties of pyridine?
Soluble in H2O
H bonding possible
What is the N in pyridine?
HBA
What are most drugs absorbed by?
Passive diffusion
What happens if a drug has a basic centre?
Make a salt = more soluble than parent compound
Describe H2O solubility of drug absorption
Almost all drugs are H2O soluble to undergo passive diffusion to some extent
Describe lipid solubility of drug absorption
Passive diffusion depends mainly on lipid solubility
Why must molecule be unionised?
As only unionised form diffuses
What does ionisation depend on?
Depends on pKa of drug + pH of solution
What do EDGs do?
Increase the HDA ability + pKa value (= increase basicity)
Because the N is NOT part of the pi system what can it do?
Behave as a nucleophile
Describe pyridine N-oxides
More polar than pyridine
Made with per-oxy acid or hydrogen peroxide
What does N-oxide promote?
Both electrophilic + nucleophilic substitution reactions
Describe nucleophilic substitution in pyridine
Occur more readily than in benzene
Positions 2 + 4
What do EDGs facilitate?
Reactions via EsAR
What do EWGs facilitate?
Reactions via SnAR
Describe amino pyridines
More basic
Resonance between 2 + 4 amino isomers
What do 2 + 4 amino isomers form?
Mono-salt
What do 3-isomer amino form?
Double salt
What are all 3 hydroxy-pyridines subject to?
Tautomerism involving H exchange
= pyridones
What positions do pyridones exclusively exist in?
2 + 4
In 6 membered rings, where does electrophilic substitution occur?
On the benzene ring
What happens if you add 2nd N?
Decrease pKa = decrease basicity
Describe other N containing 6-membered rings
Weaker bases than pyridine
All aromatic
Less reactive
What does acidic sulphonamide group do?
Give up H+
= conjugate base has resonance
What are the common 5-membered heterocycles in single system rings?
Pyrrole - NH
Furan - O
Imidazole - NNH
Thiophene - S
What are some common 5-membered heterocycles in fused ring systems?
Indole - NH
Benzimidazole - NNH
Benzothiophene - S
Benzofuran - O
What do 5-membered rings not fulfil + why?
Huckel criteria
= each molecule only appears to have 4 pi-e-
= 1 L.P used to make system
Are 5-membered rings aromatic?
YES
Describe pyrrole L.P
Delocalised = NOT available for donation to E+
What is the pKa of pyrrole?
-4
= non-basic
What are furan + thiophene?
Analogous in structure to pyrrole
What are difference between furan & thiophene compared to pyrrole?
Heteroatoms (O + S) have 2 L.Ps of e-
Describe the L.Ps in furan + thiophene
1 L.P delocalised = aromaticity
2nd located in sp2 orbital
Describe order of electronegativity in S, O + N
S < N < O
Describe the order of aromaticity in pyrrole, thiophene + furan
Thiophene > pyrrole > furan
What is the reactivity of pyrrole, furan + thiophene dominated by?
Their readiness to undergo electrophilic substitution
Describe the order of reactivity in pyrrole, thiophene + furan?
Pyrrole > furan > thiophene
Where does electrophilic attack mostly occur in pyrrole, thiophene + furan?
2-position
Does pyrrole, thiophene + furan all undergo EAS?
YES
Describe oxazole
5-membered ring system
N + O
Heterocycle is aromatic
WB = pKa = 0.8
Describe imidazole
5-membered ring system
NN - 1 like pyridine, 1 like pyrrole
pKa = 7
N = sp2
What is important about imidazole?
Soluble in H2O
= forms extensive H bonding networks
Describe tautomerism in imidazole
Rapid transfer of H from one nitrogen to the other
2 tautomers in inseparable eqm mixture
What is it called when H-atoms change position in heterocyclic systems?
Annular tautomerisations
What are bicyclic heterocycles?
Indoles
= benzo-fused pyrroles
Describe indole reactivity
Reactive pyrrole + unreactive benzene