GI strand: metabolism Flashcards
what do we get glucose from
starch and glycogen
what do we get fructose from
sucrose (sugar)
what do we get galactose from
lactose (milk)
name 2 inherited disorders which are associated with absence of enzymes involved In the breakdown of sugars
hereditary fructose intolerence
galacrosaemia
NB- can be life threatening and cause sevre brain damage
is glycolysis an aerobic or aerobic process? what kind if cells does it take place in
anerorobic
all types of cells
what are the 2 phases to glycolysis
preparative phase
generating phase
what happens in the preparative phase of glycolysis? does this step require ATP
glucose –> fructose1,6biphosphate
ATP required
what happens in the generating phase of glycolysis ? what additional things are generated here
fructose1,6biphosphate –> 2x pyruvate
ATP and NADH generated here
what is generation of ATP in glycolysis called? how many ATPs are made in the aerobic and aerobic state of glycolysis
substrate level glycolysis
anaerobic: 2ATP
aerobic: 5-7 ATPs
in glycolysis what converts glucose –> glucose-6-phsopahte? why is this importnant
hexokinase in muscles and glucokinase in skeletal muscle
prevents glucose leaving the cell
name the molecules and enzymes which aid transition of glucose to pyruvate in glycolysis
glucose — (hexokinase/glucokinase)—> glucose-6-phosphate —–> fructose-6-phosphate —(phosphofructokinase)—-> fructose1,6biphosphate —>—->phosphoenolpyruvate —-(pyruvate kinase)—> pyruvate
in the absence of O2 what is pyruvate converted to and why is this important
pyruvate —> lactate
allows for regeneration of NAD
what is the Warburg effect ? what is this significant in and why?
high lactate productions in aerobic conditions
diagnostic of cancer as tumour cells absorb glucose more rapidly then normal cells but use aerobic glycolysis
where is glycogen mainly stored
liver and skeletal muscle
where are the glycosidic bonds made in glycogen, allowing it to be branched
1,4 and 1,6 glycosidic bonds
highlight the steps and enzymes involved in glycogen synthesis
glucose —-(hexokinase/glucokinase)—–>glucose-6-phosphate —(phosphoglucomutase)—-> glucose-1-phospahte + glucogenin +UDP-glucose —-(glycogen synthase enzyme) —-(branching enzyme) —-> glycogen
how does glucogen synthase enzyme work?
keeps adding UDP-glucose via 1,4 glycosidic bonds to make a long chain
how does branching enzyme work?
breaks of parts of the chain and adds it at the C6 of main chain =1,6 glycosidic chains
when do glycigenisis occur
in the fed state
when does glycogenlysis occur
in the fasting state
what hormones induce glycogenlysis
glucagon
noradrenaline
adrenaline
highlight the steps and enzymes involved which turn glycogen to glucose, in the liver and muscle cells
glycogen —(glucogen phosphorylase)—>. glucose-1-phosphate —-(phosphoglucomutase)—> glucose-6-phosphate
in muscle this goes into the glycolysis cylce
in the liver, kidneys and duodenum this is acted on by enzyme glucose-6-phosphatase –> turning it into glucose
where is the enzyme glucose 6 phosphatase found
in liver, kidneys and duodenum
highlight the steps that occur in the link reaction ? what other molecules are produced here ?
2 pyruvate —(pyruvate dehydrogenase)— 2 acetyl CoA
2NADH and 2CO2 produced
how does acetyl CoA get converted to fatty acids and what enzyme is required in this process
Acetyl CoA —-(Acetyl CoA carboxylase)—-> Maalonyl CoA —-> fatty acids
highlight the steps in the Krebs cycle and enzymes involved
Oxaloacetate + Acetyl CoA —(citrate synthase—> citrate —-(auto citrate)—-> isocitrate —-(isocitrate dehydrogenase) —>a-ketoglutarate —(a ketoglutarare dehydrogenase) —> succinyl —-(succinylCoA synthase) —-> sucinate —(complex 2/ sucinate deHgenase)—> fumate —-(Fumerase) —> malate —-(malate DH) —> OAA
highlight the steps in the electron transport chain
1) NADH into complex1, meanwhile FADH2 into complex 2
2) drop off electrons
3) e- from complex 1 and 2 to co-enzyme Q
4) e- to complex 3
5) e- to cytochrome C
6) e- to complex 4
7) e- donated to O2 and combine with H+ to H2O
8) H+ move through ATP synthase/F0F1ATPase
9) the movement of H+ combines ADP to ATP
what is the generation of ATP in Electron transport chain called?
oxidative phosphorylation
what can cause a lack of pyruvate dehydrogenase? how do we see this in and what can it cause
lack of thiamine seen in alcohol addicts can cause beriberi or Wernicke-Korsakoff syndrome
what activates and what deactivates pyruvate dehydrogenase?
activated by: sudden demands upon the cell- signalled by Ca2+
deactivated by: NADH, acetlyCoA, ATP, ADP (basically when energy levels are high)
what waste product is released from the Krebs cycle?
CO2
between isocitatre —> a-ketogluterate and —> succinyl
what do reduced NADH and FADH2 carry
electrons
when is the ATP made in the Krebs cycle
succinyl –> succinate
first GDP–>GTP then this turned into ATP
Why do diabetic patients synthesise ketones
cant use glucose effectively in the absence of insulin ….. so glycolysis is inhibited …. so pyruvate low …..
BUT STILL UNDERGO gluconeogensis … so oxaloacetate and malate being removed to form glucose
insulin low so fatty acids oxidised from adipose tissue = high levels acetlyCoA… lack of oxalactete prevents ACoA entering Krebs = ketones synthesised
how does cyanide effect ETC
blocks the formation of water at the end
how are protons able to move from a low [H+] in the maxtrix to a high [H+] in the intracellular membrane
each reduction step of electrons moving from complex to complex releases energy allowing H+ to pump across - like a game of hot potato
for one molecule of ATP how many protons cross the membrane
4 (should be 3 but an extra one for the movement of Pi)
what are uncouplers and what do they do
weak acids which are soluble in membrane and can associate with H+ at the inter membrane space and release the protons in the matrix
what is the aim of uncouplers
to dissipate the proton gradient and so the ETC can continue without ATP synthesis
what is the significance of high amounts of brown adipose tissue being found in newborns
has more mitochondria and contains thermogenin (uncoupling protein), when activated due to low body temps energy is released as heat
what happens when the ETC is uncoupled from ATP synthesis?
energy is released as heat
what is DNP? why is it dangerous
a ‘slimming’ pill
causes side effects: hyperthermia, tachycardia, excess sweating, blinding
other than energy what can fats be used to generate
phospholipds
cholesterol
same two essential fatty acids which are precursors for eicosanoids (prostaglandins, leukotrienes, thromboxanes)-ie. inflammatory and anti-inflammatory molecules
omega 3 and 6
what is cholesterol a precursor for?
membranes
vitamin D
steroid hormones
bile salts
what steroid hormones does cholesterol lead to the development of
- androgens
- oestrogen
- progesterone
- mineralocorticoids (eg.aldesterone)
- glucocorticoids (eg.cortisol)
how do chylomicrons make their way from the intestines to the liver
intestinal epithelial cells —> into lymph lacteals –> enter circulation via thoracic duct and subclavian vein
NB: not a direct from GI tract to liver
what does the liver do to. chylomicrons
turns them into VLDL
this them turns into LDLs and HDLs
what happens when fatty lipids (ie. chylomicrons,VLDLs, LDLs) arrive at peripheral tissues the fed state ?
released by lipoprotein lipase
what happens when fatty lipids arrive at peripheral tissues the fasting state ?
form adipose tissue: triacylglycerols broken down by hormone sensitive lipase —> fatty acids released into blood —> transported to tissues bound to albumin
can fatty acids be used by the brain?
no because cannot cross BBB
What stimulates fatty acid oxidation
long chain fatty acids
what is the first step in the oxidation of FAs
activation to fatty acyl CoA from the long chain fatty acids
how do we move acyl CoA into the mitochondria
carnitine transport system adds a carnitine and removes a CoA making fatty acid carnitine, done by carnitine palmitoyl transferase 1 = so can be transported
what inhibits the carnitine transport system
malonyl CoA (prevents the synthesis and degradation of FAs at the same time)
what happens when fatty acyl cartatine enters the mitochondria
carnitine palmitoyl 2 removes the carnitine and adds a CoA creating fatty acyl CoA
during the oxidation of fatty acids in the mitochondria what is produced and released in each oxidation
each turn releases one acetyl CoA and produces NADH and FADH2
what happens to the products of fatty acid oxidation
NADH and FADH2 are oxidised in the ETC and Acetyl CoA enters the Krebs
can the oxidation of fats be done in a anaerobic environment
no has to be aerobic
what is the main thing which regulates fatty acid synthesis ? how does it do this
conc malonyl CoA
inhibits carnitine acyl-transferase 1
why does malonyl CoA inhibit fatty acid synthesis
ensures that fatty acid breakdown is inhibited when energy is plentiful
why do we get formation of ketone bodies
excess acetyl CoA
where does ketogenesis occur
liver
where does ketolysis occur
brain and muscle
why would ketogenesis occur
when the body is reliant of fatty acid oxidation for energy
in what states would we get ketogensis occurring
fasting
uncontrolled diabetes
low blood glucose conc
why cant acetyl CoA be used in the Krebs cycle when glucose levels are low
because meanwhile gluconeogensis is occurring and so OAA is pumped and used out of the cell a so cannot react with Acetyl CoA
how does low levels of glucose lead to ketone body formation
decreased kerb cycle activity = decreased citrate levels = body joins 2 Acetyl CoA –(acetlyCoA acyltransferase) –> Acetoacetyl CoA —–(acetlyCoA acyltransferase)—–> HMG-CoA —-(HMG-CoA lyase)—> AcetoAcetate —> 3hydroxybutyrate and acetone
what is the job of acetlyCoA acyltransferase
joins 2 Acetyl CoA molecules and removes a CoA in the process
what are the main organs which synthesise cholesterol
intestines and liver
what are high levels of cholesterol associated with
CV disease and Alzheimers
highlight the steps in cholesterol biosynthesis
Acetyl CoA —> HMG CoA —–(HMG CoA reductase) —> Mevalonate —-phosphorlyated —-> isoprene units —– 6 isoprene units phosphorylated —> squalene ——cyclisation to form ring structure —-> lanosterol —> cholesterol
where does cholesterol synthesis take place
smooth ER
which step in cholesterol synthesis is the most importnant and why?
first step as HMG CoA reductase controls the rate of synthesis
what is cholesterol synthesis controlled by
- cholesterol levels (high levels = inhibit synthesis)
- energy levels (insulin stimulates and glucagon inhibits )
why would insulin stimulate and glucagon inhibit cholesterol synthesis
because insulin signals that there is energy availability whilst glucagon signals that there is a lack of energy and so energy is not ‘wasted’ on cholesterol synthesis
how do insulin and glucagon affect the activity of HMG CoA reductase
effect the phosphorylation enzyme which is inactivated at low energy levels
how does phosphorylation affect the activity of HMG CoA reductase
- controls the amount of enzyme present
- controls the transcription of enzyme (inhibited by high cholesterol)
- rate of degradation of enzyme (inhibited by high cholesterol)
how does high levels of cholesterol affect the transcription enhancing signals from the ER
inhibits the movement of SREBP (sterol regulatory binding protein) into the nucleas of the ER and so inhibits the binding od=f SREBP to SRE (sterol regulatory element) = decreasing the levels of transcription of HMG coA reductase and so cholesterol
how do we break down cholesterol
we cant ! can only excrete via faces
how do saturated fats affect cholesterol levels in the blood
raise the levels of LDL cholesterol
how do we get the formation of Trans Fats
formed from hydrogeneation of oils
how do Trans fats affect cholesterol levels
raise LDL and lower HDL
what effects do mono-unsaturated and poly-unstaurated fats have on disease prevalence?
reduce CHD risk and other benefits?
how does familial hyperccholesterolaemia affect and individual, what are they at increased risk of?
lack of LDL receptors
increased risk of CHD
what are high levels of LDL associated with
increased risk of atherosclerosis
what is Tangier disease
lack of HDL (so sufferers at higher risk of CHD)
describe the formation and consequence of an atherosclerotic plaque
damage to endothelial cells —> LDL access to subintimal space (space behind epithelium) —>accumulation of foam cells —> create bulge in vessel wall = plaque —> fibrous collagen ‘cap’ is formed —> restrict blood flow in coronary arteries = angina
how can thrombosis occur from a plaque
inflammatory response: macrophages produce proteinase enzymes —> degrade fibrous cap —> plaque ruptures —> activates clotting mechanisms —> blood clot
how has high levels of cholesterol been associated with alzieherms
high cholesterol = accumulation of AB peptide
what is alcoholic steatohepatitis and how is it caused
liver disease
metabolism of large amounts of Alcohol inhibit fatty acid oxidation and activate triglyceride synthesis = accumulation of triglycerides
what is non alcoholic steatohepatitis and how is it caused
chronic liver disease
insulin resistance leads to increased insulin secretion = FA synthesis = accumulation of FA on liver
what are excess sugars usually converted to
fatty acids
what are fatty acids converted to
- triacylglycerols (triglycerides) for storage
- other lipid synthesis (for membranes)
where does fatty acid synthesis mainly occur
liver , adipose tissue, breast tissue during lactation
how are is manlonyl CoA synthesised
citrate —(citrate lyase)—-> acetyl CoA —–(acetylCoA carboxylase) —–> malonyl CoA
how are FAs synthesised
x(malonyl CoA + Acetyl CoA) —-> palmitate —> longer chain FAs or unsaturated FAs
highlight the synthesis of triglycerols
3 fatty acids + glycerol-3-phosphate
what is a key modulator for metabolism
ATP availability: AMP-activated protein kinase
how does AMP-activated protein kinase work
phosphorylates key enzymes involved in metabolism in the heart, adipose tissue, liver, muscle
what are the overall effect of AMP-activated protein kinase
increase energy providing pathways and inhibit anabolic pathways (eg. FA synthesis, insulin secretion)
how does insulin influence glycolysis in muscle and adipose tissue
- increases expression of enzymes coding for glycolysis
- decreases expression of genes coding for glucosneogensis enzymes
how does glucagon influence glycolysis in muscle and adipose tissue
regulates levels of fructose2,6biphosphate which activate glycolysis and inhibits gluconeogeneiss