Genetics Review Flashcards
Exclusion
if any of the alleles don’t match
Inclusion
if all alleles match
cannot conclude DNA came from same person
much calculate random match probability (RMP)
Sum rule
if two events are mutually exclusive, can add probabilities to determine the probability of one or the other happening
Product rule
if two events are independent, can multiply probabilities to determine the probability of both happening
Independence
outcome of one event does not affect outcome of other event
Law of segregation
alleles separate during meiosis
Law of independent assortment
loci separate during meiosis
Population genetics
study of genetic variation and how it changes in time and space
summarized as allele and genotype frequencies
Hardy Weinberg Equilibrium requirements
infinite population (no drift) random mating (no selection) no mutation no migration no selection
Linkage equilibrium
alleles from different loci are randomly associated
Statistic
some observable property of a sample
Population
set of objects of interest
Sample
subset of population that was observed
Null hypothesis
no difference (between groups, between observed and expected, between source of Q and K)
Alternative hypothesis
there is a difference (between groups, between observed and expected, between source of Q and K)
Type I error
Ho is true, but reject Ho
wrongfully accused –> wrong person in jail
Type II error
Ho is false, but don’t reject Ho
wrongfully acquitted –> let criminal go
P
probability of getting observed results (or results more extreme) if null hypothesis is true
if p< alpha, reject Ho
Chi-square equation
sum of ((O-E)^2/E)
Chi-square requirement
expected need to be greater than five and none less than 1
Permutation test
type of randomization test
shuffle original data and sample many times (1000+)
compare observed data to randomized data to determine how unusual observed data is
to test HWE or LE, would randomly draw pairs of alleles to see how distribution of randomized genotypes compares with observed distribution of genotypes
Likelihood ratios
compare probabilities of the evidence under two alternative propositions (usually Ho and Ha)
often comparing Hp and Hd
LR=Hp/Hd
Hp
Ho, hypothesis of prosecution
Hd
Ha, hypothesis of defense