Genetics Flashcards
How is activated and repressed expression of DNA?
Histone methylation —– repress DNA expression
Histone acethylation —– relaxes DNA coiling – activate DNA expression
which modification in mRNA is mediated by the sequence AATAAA? and where is made?
Polyadenylation signal—— 3’ extreme
Difference between variable expressivity and incomplete penetrance
- variable expressivity: mutant genotype and variables fenotypes
- incomplete penetrance: mutante genotype NO mutant phenotype
Correlates:
- T (9,22)
- T(15,17)
- T (14,18)
- T (8,14)
- T (11, 14)
- BCR/ABL Chronic myelogenous leukemia
- Acute myelogenous leukemia, retinoid receptor alpha
- Follicular lymphoma (bcl-2)
- Burkitt lymphoma, c-myc
- mantle cell lymphma (cyclin D)
Kosak consensus sequence
is like shine dalgarno sequence (E. coli)
gccRccAUGG
R is adenine and guanine: positioned 3 bases upstream of AUG: plays a role in initiation of translation process
RAS genes
code for a family of G - protein signal transduction in Ras- MAPK pathway
RAS proteins exist in two states:
- Inactive GDP bound state
- Active GTP bound state
RAS become activated when a growth factor ligand binds toa receptor tyrosine kinase
RAS mutations: colon cancer and pancreatic malignancies
Heteroplasmy
presence of both normal and mutated mitochondrial DNA —- resulting in variable expression in mitochondrial inherited diseases
Linkage desequilibrium
measured in population
when their respective alleles are inherited together (in the same gamete) less or more that is expected corresponding with frequencies.
Is the result of physical proximity of genes in chromosomes
Frameshift mutation
deletion or insertion of a # of bases thatis nor divisible by 3
Loss of heterogenicity
1 hereditary gene mutation (1st hit)to malignant transformation
Additional somatic mutation (loss ofheterogenicity) 2nd hit to malignant transformation
Variable expresivity vs genetic heterogeneity
VE: The same mutations different clinic manifestations
GE: same phenotype, different genotypes
Polymerase chain reaction
healing: denatures DNA fragments
Cooling: allowing premade DNA primers anneal to specific sequences on the single strands.
Rewarmed: DNA polymerase synthesized a new complementary DNA strand. 5´ - 3´
Hand foot genital syndrome
dominantly inherited condition: malformation of distal limbs, hypoplastic firts digits and mullerian fusion abnormalities (uterus didelphys).
- HOXA13 mutation
Some beta thalassemia mutation
splice site: retaines intron in mRNA
Heterochromatin and euchromatin
- *condensed- methylated DNA or deacethylated - compact body at the peripheryof nucleus (barr body). low level of transctiptional activity
- Euchormatin: acetylated - high level of transcriptional activity