Genetic Testing Flashcards

1
Q

What could a marker-based genetic test diagnose?

A

Duchenne or Becker Dystrophy

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1
Q

What could a serum amino acid-based genetic test diagnose?

A

PKU

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1
Q

What could a cholesterol-based genetic test diagnose?

A

hyperlipidemia

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3
Q

How is WAGR diagnosed?

A

chromosome analysis, FISH (for the WAGR locus), microarray

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3
Q

What are compared in CMA?

A

reference DNA to the patient/test DNA

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4
Q

What could a chromosomal-based genetic test diagnose?

A

Trisomies

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5
Q

What could a DNA sequence-based genetic test diagnose?

A

BRCA

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6
Q

What is the second definition of genetic testing?

A

Examining a fluid or tissue sample (could be DNA and non-DNA) for biochemical, chromosomal, or genetic markers that indicate the presence or absence of disease

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7
Q

How does your last name serve as a genetic test?

A

identifies your ethnic group and predisposition to diseases or certain risks

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7
Q

What is a limitation for chromosome analysis?

A

resolution- small insertions/duplications/deletions are hard to discern

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8
Q

What is the best test to start with for Down Syndrome?

A

chromosome analysis

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8
Q

predictive testing

A

pt shows no signs or symptoms- looking for relative risk

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9
Q

What is a Wilms’ Tumor?

A

a nephroblastoma (of the kidney)

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10
Q

What are the probes in CMA?

A

oligonucleotides containing DNA fragments from the whole genome

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12
Q

What is the first definition of genetic testing?

A

Analyzing an individual’s DNA to determine predisposition to a particular health condition or to confirm diagnosis of a disease (risk or diagnosis)

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13
Q

Where is the WAGR locus?

A

PAX6 on chromosome 11

14
Q

What could a urine-organics based genetic test diagnose?

A

methylmalonic or propionic acidemia

14
Q

What is a limitation for FISH?

A

you have to know what area you want to probe- it is a specific test

14
Q

non-informative test

A

testing doesn’t determine the underlying problem, even if you rule in or exclude diseases and risks

15
Q

What does an abnormal color/ratio in CMA mean?

A

a deletion or duplication has occurred

15
Q

What is an advantage to CMA?

A

it can detect microdeletions and microduplications

16
Q

What is the treatment for WAGR?

A

none- surveillance of genitourinary problems, including cancers

18
Q

What is the cause of WAGR?

A

an interstitial deletion of 11p13

19
Q

informative test

A

test results conclusively give diagnostic or relative risk results based on determination of the underlying problem (mutations, etc)

21
What does WAGR stand for?
Wilms' Tumor Aniridia Genitourinary malformations + Retardation
22
What does aCGH stand for?
array comparative genomic hybridization
23
heterogeneity
more than one gene causes multiple mutations for one disease
25
What could an x-ray based genetic test diagnose?
achondroplasia
27
What could a restriction-site based genetic test diagnose?
hemochromatosis
29
What test could be used to diagnose Down Syndrome, if the correct probe is used?
FISH
30
diagnostic testing
pt has signs or symptoms- tests rule diagnoses in or out
31
What is aniridia?
absence of the iris (colored part) of the eye
32
What does microarray look for?
looks for broad gains or deletions
33
What could an ultrasound-based genetic test diagnose?
prenatally-presenting abnormalities
34
What does an interstitial deletion of 11p13 cause?
WAGR
36
What test essentially does FISH across the whole genome?
microarray
37
What is an advantage to DNA sequencing?
it can detect point mutations and novel mutations
38
What does FISH do?
looks for specific gains or deletions