Genetic Manipulation Flashcards

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1
Q

Three Essential Features of a
Plasmid Cloning Vector

A
  1. Origin of replication
     essential for self-
    replication in host cells
  2. Dominant selectable
    marker gene
     usually confers drug
    resistance
  3. One or more unique
    restriction sites
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2
Q

Positive / Negative Selection

A

 Positive Selection: Cells that have taken
up the recombinant plasmid will grow in
the presence of something, while those
that have not, die.
 e.g. Antibiotic resistance
 Negative Selection: Cells must lose
something to be identified, or survive.
 e.g. loss of expression of a toxin gene, or
 loss of b-galactosidase activity

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3
Q

Alpha Complementation:
Detecting recombinant plasmids

A

 The E. coli lacZ gene encodes b-
galactosidase (b-gal).
 b-gal converts the colourless substrate
X-Gal into a blue product.
 Plasmid contains gene sequence for a-
peptide of b-gal.
 E. coli cells lack this sequence in their
genome, lacZ-
 Cells with b-gal activity produce blue
colonies when grown on X-Gal; cells
lacking b-gal produce white colonies.
 Therefore, plasmids with foreign DNA
inserted in the a-peptide b-gal gene will
prevent active b-gal complementation
resulting in white colonies

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4
Q

Biofortification

A

 Nutritional enhancement
 Major goal is to address micronutrient
malnutrition
 The GM approach offers some solutions

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5
Q

Golden Rice

A

vitamin A deficiency leading to 500,000 cases of
child blindness each year
 Improved vitamin A nutrition could prevent
>600,000 child deaths per year
 Engineer rice to contain b-carotene (provitamin
A), which gives it a yellow colour
 Golden Rice 2 contains the phytoene synthase
gene from maize in an indica rice cultivar that is
consumed by 90% of the Asian population

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6
Q

B-Carotene Pathway

A
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7
Q

Recombinant Insulin

A

Until recombinant DNA technology, these
individuals had to purchase expensive
combinations from a variety of other animals
 Now insulin is produced in E. coli in large vats
on a commercial scale
 Patients can now obtain “Humulin”, a genetically
engineered human insulin
 Use molecular biology to ‘improve’ insulin, e.g.
longer half-life in circulatory system

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8
Q

Other medicinal recombinant
proteins

A

 Factor VIII – promotes blood clotting in treatment
of haemophilia
 Tissue plasminogen activator (TPA) – dissolves
blood clots in treatment of heart attacks
 Renin inhibitor – lowers blood pressure
 Interleukin 2 – used to treat kidney cancer
 Human growth hormone is used to treat pituitary
dwarfism in children
 Used to be derived from human cadavers which can
transmit viral infections of central nervous system

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9
Q

Recombinant Erythropoietin

A

 Erythropoietin (EPO) – stimulates red blood cell
production in situations of anaemia
 EPO is a cytokine (protein signalling molecule)
 EPO is a glycoprotein (carbohydrates attached to
certain amino acids).
 As bacteria do not perform glycosylation, need to
express recombinant EPO in cultured human cells or
P. pastoris (yeast)
 Obtain correct glycosylation pattern

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10
Q

Artificial Selection

A
  1. artificial selection: breeders choose which
    organism to mate to produce offspring with
    desired traits.
    * They cannot control what genes are passed.
    * When they get offspring with the desired traits,
    the maintain them.
    Three types of artificial selection:
    A. selective breeding
    B. hybridization
    C. inbreeding
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11
Q

Selective Breeding

A

when animals with
desired characteristics are mated to
produce offspring with those desired traits.
* Passing of important genes to next
generation.
* Example: Champion race horses, cows
with tender meat, large juicy oranges on a
tree.
* Selective breeding occurs when you
choose the best male and female to
breed.
* This allows you to fine tune and control
the traits
* The offspring or babies will then have the
best traits.
* Then you continue to breed those
organism with the best traits, those traits
will be maintained.

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12
Q

Hybridisations

A

two individuals with unlike
characteristics are crossed to produce the best in both
organisms.
* Example: Luther Burbank created a disease resistant
potato called the Burbank potato.
* He crossed a disease resistant plant with one that had
a large food producing capacity.
* Result: disease resistant plant that makes a lot of
potatoes.

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13
Q

Inbreeding

A

breeding of organism that
genetically similar to maintain desired
traits.
* Dogs breeds are kept pure this way.
* Risk: since both have the same genes,
the chance that a baby will get a recessive
genetic disorder is high.
* Risks: blindness, joint deformities.

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14
Q

Cloning

A

Cloning: creating an organism that is an
exact genetic copy of another.
* identical twins are naturally created
clones.

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15
Q

How is cloning done

A
  • Eggs are haploid
  • Haploid: half the
    chromosomes, 23 in
    humans
  • Body cells are diploid:
  • Diploid: two sets of
    chromosomes, one from
    mom and one set from
    dad 46 in humans.
    How could you clone
    a human?
  • Step 1: An egg is
    removed from a female
    human
  • Eggs are haploid: 23
    chromosomes.
  • The nucleus of the egg
    is removed and is
    thrown away.
    23
  • Step 2: A body cell is
    removed from another
    person.
  • The nucleus of the
    body cell is removed
  • Body cells are diploid:
    46 chromosomes.
    46
    Body Cell
  • Step 3:
  • The nucleus of the
    diploid body cell is put
    into the egg.
  • This egg no longer
    needs to be fertilized
    since it has all 46
    chromosomes.
    46
  • Step 4: The egg is then charged with
    electricity to start mitosis.
  • Step 5: Its then put into a surrogate mother
    so it can grow.
  • Its going to be genetically identical to the
    parent of the body cell.
  • But it will be a baby.
  • Plants and animals can be cloned.
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16
Q

Benefits of Cloning

A
  1. you can make exact
    copies of organisms
    with strong traits.
  2. Increase food supply
  3. Medical purposes:
    clone organs for
    transplants.
  4. Bring back or Stop
    species from going
    extinct.
17
Q

Risks of Cloning

A
  1. Decreases genetic diversity
  2. If one of your clones gets a disease,
    they all get it: same immune system.
  3. Inefficient: high failure rate: 90%+
  4. Expensive
18
Q

Cell/gene therapy

A

 A branch of Regenerative Medicine, an emerging field that involves
the “process of replacing, engineering or regenerating human cells,
tissues or organs to restore or establish normal function”.
 Gene therapy is the the delivery of therapeutic gene into a patient’s
cells to treat disease.
 Cell therapy is the delivery of intact, living cells into a patient to
treat disease.
 Combination Cell/Gene Therapy approaches that seek to insert
genes into a patients’ own cells to control or kill HIV are in clinical
trials now.

19
Q

Ex Vivo

A

– Usually with blood cells (lymphocytes or blood
stem cells) for diseases affecting the
hematopoietic system

20
Q

In Vivo

A

– Oncolytic adenoviruses for the treatment of
cancer
– Adeno-associated vectors for the treatment of
Duchenne muscular dystrophy or hemophilia
– Non-viral for cancer

21
Q

Sterilising Cure

A

 complete eradication of
all replication
competent forms of
HIV. The reservoir is
gone.
 Timothy Brown
received a sterilizing
cure

22
Q

Functional Cure

A

 Life-long control of virus
in the absence of
antiretroviral therapy, but
without achieving
complete eradication of
HIV.
 Virus remains in
reservoirs in the body.
Cell/Gene Therapy will likely produce a
functional cure, if a cure is generated

23
Q

Gene Therapy- Vectors to deliver anti-
HIV genes

A

 LV- Lentivirus vectors
 RV- gammaretroviral
vectors,
 AAV – adeno-associated
vectors
 Adenovirus vectors
 Vectors are replication
defective – so they cannot
replicate and spread once they
are inside the cells and after
delivering the anti-HIV genes

24
Q

Limitations of gene therapy

A

Limitations
* All the above corrects a somatic cell. But
the genetic defect cannot be prevented
from passing to the next generation.
* To correct that you need to correct the
genome of all germline cells
* OR, correct it in the embryo?