gene expression and nucleic acids Flashcards

1
Q

what is a nucleic acid?

A

DNA and RNA

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2
Q

What are the monomers of nucleic acids?

A

nucleotides

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3
Q

what are the polymers

A

DNA or RNA

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4
Q

what is the structure of DNA?

A

double stranded, bases A T C and G, deoxyribose sugar and phosphates

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5
Q

what is mRNA

A

takes a copy of a genetic code that encodes for a specific protein to the ribosome

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6
Q

what is tRNA

A

brings an amino acid to ribosome through a complementary anti-codon to the mRNA’s codon

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7
Q

what is rRNA?

A

ribosomal RNA, forms a ribosome along with other proteins

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8
Q

what is the general structure of a nucleotide?

A

phosphate group, deoxyribose/ribose sugar and a nitrogenous base

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9
Q

what is condensation polymerisation?

A

used to join amino acids by creating a peptide bond through the creation of a water molecule from a hydroxyl group on the 3’ end and a hydrogen from the 5’ end of another amino acid

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10
Q

what is the anti parallel nature of DNA?

A

one strand runs 5’ - 3’ with the 5’ carbon pointing up while the other runs 3’ - 5’ with the 5’ carbon pointing downwards (opposite directions)

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11
Q

what does it mean why the genetic code is universal?

A

all organisms contain the same 4 bases that make up DNA, meaning all amino acids are coded for by the same codons in all organisms

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12
Q

what does it mean by the genetic code is degenerate

A

a single amino acid can be coded for by more than one codon

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13
Q

what are the steps of transcription or translation?

A

initiation, elongation and termination

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14
Q

what does initiation do in transcription?

A

RNA polymerase (transcription factor) binds to the promoter region and unwinds and unzips the DNA, breaking the hydrogen bonds and exposing nitrogenous bases

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15
Q

what does elongation do in transcription?

A

free nucleotides are added in a 5’ to 3’ direction as the RNA polymerase moves along (DNA recoils after polymerase has passed)

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16
Q

what is termination in transcription?

A

where transcription ends when RNA polymerase reaches the termination site (stop triplet), chemicals are released causing polymerase to detach

17
Q

what are the three steps of RNA processing?

A

methyl cap, poly-a-tail and splicing

18
Q

what is a methyl cap?

A

added to 5’ end of pre-mRNA

19
Q

what is a poly-a-tail?

A

added to the 3’ end of the pre-mRNA molecule, increases stability and prevents degrading

20
Q

what is splicing?

A

a spliceosome removes introns and joins exons together

21
Q

what is alternative splicing?

A

the removal of different exons to give arise to different proteins

22
Q

what is initiation in translation?

A

ribosome attaches to the 5’ end of mature mRNA and moves along until it reaches the AUG start codon when the corresponding tRNA will bring the amino acid met

23
Q

what is elongation in translation?

A

the ribosome continues reading and the tRNA bring corresponding amino acids, they join the growing polypeptide chain via condensation polymerisation

24
Q

what is termination in translation?

A

the ribosome reaches a stop codon where it detaches

25
what is the structure of a gene?
promoter region - where transcription factors bind exons and introns stop and start triplets
26
what are proteins made of
amino acids - monomer
27
what is the structure of an amino acid?
amino group, acid (COOH), hydrogen and an r group which varies depending on the amino acie
28
what is the primary structure
the linear sequence of amino acids
29
what is the secondary structure?
random coiling, alpha helix and beta pleated sheets (hydrogen bonds)
30
what is the tertiary structure
the total irregular folding of the 3D protein (hydrogen bonds, ionic and covalent bonds)
31
what is the quaternary structure?
two or more polypeptide chains interacting to form a functional protein
32
when is a protein deemed biologically functional?
tertiary