Gene Expression Flashcards

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1
Q

What process copies DNA to mRNA?

A

Transcription

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2
Q

Where does transcription occur?

A

In the nucleus

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3
Q

What process converts mRNA to proteins?

A

Translation

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4
Q

Where does translation occur?

A

In the cytoplasm.

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5
Q

What are the three stages of transcription and translation?

A

Initiation, elongation, termination.

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6
Q

During DNA replication, name the enzyme, substrate and template used.

A

Enzyme - DNA polymerase
Substrate - dNTPs
Template - DNA

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7
Q

During transcription, name the enzyme, substrate, and template used.

A

Enzyme - RNA polymerase
Substrate - NTPs
Template - DNA

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8
Q

During translation, name the enzyme, substrate and template used.

A

Enzyme - ribosome
Substrate - amino acids
Template - mRNA

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9
Q

What is the name of the promoter sequence used to indicate transcription?

A

A TATA box (TATAAA)

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10
Q

Does the TATA box exist on the coding strand or the template strand?

A

Coding strand
The code ATATTT exists on the template strand and the complimentary code TATAAA on the coding strand initiates transcription.

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11
Q

Does the template strand run 5’ to 3’ or 3’ to 5’? What does that make the coding strand?

A

Template strand - 5’ to 3’

Coding strand - 3’ to 5’

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12
Q

What does rRNA stand for?

A

Ribosomal RNA

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13
Q

What does mRNA stand for?

A

Messenger RNA

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14
Q

What does tRNA stand for?

A

Transfer RNA

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15
Q

What are the names of the capping systems used at the 5’ end and the 3’ end of the complete mRNA strand after transcription?

A

5’ - a 5’ cap

3’ - a polyA tail followed by the sequence AAAAA… until ten 3’ termination end.

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16
Q

What does capping do?

A

Give protection and stop degradation.

17
Q

What happens to pre-mRNA to make the complete mRNA strand?

A

The introns are spliced from the pre-mRNA to create a shorter mRNA strand of exons.

18
Q

What codons ALWAYS starts translation and what bases is it made up of?

A

Methionine
A - Alanine
U - Uracil
G - Guanine

19
Q

How are the complimentary bases on a tRNA stem loop bonded?

A

Through hydrogen bonds

20
Q

What is an anticodon?

A

An anticodon on a tRNA molecule which is complementary to the codon on the mRNA strand. An anticodon lies at the bottom of the stem loop of tRNA and codes for a specific amino acid.

21
Q

What is tRNA’s function?

A

TRNA is a molecule that transfers amino acids from the nucleus to the ribosome for protein synthesis.

22
Q

What is the shine-dalgarno sequence?

A

The coding sequence where the ribosome joins the strand, located about 8 bases up from start codon. Translation does not begin at this point. There a short sequence of non-coding region before the start codon begins coding.

23
Q

What do E, P and A regions stand for and where are they located?

A
E = E side, this is the left hand side of the start codon at the beginning of translation.
P = Peptidyl site, on the start codon, in the middle.
A = Aminoacyl site, to the right of the start codon, the next codon to be coded.
24
Q

In translation, what happens in elongation?

A

A peptide bond is created between the amino acid coded on the P site and and the amino acid on the A site. The ribosome then moves from left to right (5’ to 3’), so the original P position is taken up by E, A by P and A is a new codon. As the ribosomes moves along the strand a polypeptide chain is created with the amino acids coded in translation, creating a protein.