Final Exam Flashcards
What types of tissue is GLUT1 present in?
most
What types of tissue is GLUT3 present in?
neuronal
What types of tissue is GLUT2 present in?
hepatocytes
pancreatic B cells
What types of tissue is GLUT4 present in?
cardio
adipo
skeletal
What GLUT is [glucose] sensitive?
GLUT2
What GLUT is insulin dependent?
GLUT4
What happens to GLUT4 when insulin is secreated?
fuses with cell membrane to access insulin in blood
What happens to GLUT4 when insulin is not secreated?
sequesters inside the cell
What is the commitment step of using glucose in metabolism?
Hexokinase
Is Hexokinase I-III or Hexokinase IV always at max rate making it [glucose] insensitive?
Hexokinase I-III
What inhibited Hexokinase I-III?
G6Pase
Is Hexokinase I-III or Hexokinase IV [glucose] sensitive?
Hexokinase IV
Is Hexokinase IV inhibited by G6Pase like HK I-III?
No
What cells is Hexokinase IV present in?
hepatocytes
pancreatic B cells
Is hexokinase IV inhibited or activated by insulin?
activated
What cell type is G6Pase mainly expressed in?
hepatocytes
What is positive cooperativity?
binding of a substrate at one active site enhances binding at another active site
What are the 2 conformations of the symmetry model?
T - tight
R - relaxed
In the symmetry model, how does each conformation interact with its substrate?
Tight - binds poorly
Relaxed - binds well
T/F? enyzmes can have T and R conformations
false (only one at a time)
In the symmetry model, [T]/[R] = large or small number
large positive
In the symmetry model, disassociation constant for T or R is smaller (better binding)?
R b/c it binds better with substrate
Do allosteric inhibitors or activators increase the cooperatively affect and why?
inhibitors; more substrate is required to overcome the bias towards the T state = increased cooperatively affect (trying to get up hill)
Do allosteric activators prefer the R or T state?
R
Why do allosteric activators decrease the cooperatively effect?
active sites don’t communicate with one another
In a graph, where is the allosteric inhibitor and activator located?
inhibitor: bottom line
activator: top line
Does PKA activate or inhibit PFK-2 in hepatocytes ?
inhibit
Does PPP-1 activate or inhibit FBPase-2 in hepatocytes?
inhibit
Is PKA activated or inactivated by insulin in hepatocytes?
inactivated
___________________ does not apply to cardiomyocytes
gluconeogenisis
Why does PKA activate PFK-2 in cardiomyocytes?
there is no phosphorylation location on PFK-2 so FBPase-2 is inhibited (phosphorylated); since epinephrine is signaled in cardiomyocytes in the f/f response there is a need for more ATP so glycolysis is kept on using the process above
In cardiomyocytes, PKA is not used in the well fed state since insulin is signaling not epinepherine. What is used to activate PFK-2?
AKT
In cardiomyocytes, epinephrine and insulin signaling ________ [F26BP] and ________ glycolysis
increase [F26BP]
increase glycolysis
What enzymes in glycolysis are regulated by covalent modification?
FBPase/PFK
pyruvate kinase
Does PKA activate or inhibit pyruvate kinase?
inhibit
What is the regulatory enzyme in glycogenisis/glycogenlysis?
glycogen synthase
All the steps in glycogenlysis are ____________
hydrolytic
What is branching in glycogensis?
adding glucoses to a-1,4 and a-1,6 transglycosylase’s Tyr residue
why is glucose branched in glycogenisis?
fits in hepatocytes
What catalyzes debranching in glycogenlysis?
1,4-glucanotransferase
amylo-1,6-glucosidase
what kind of bond is broken in debranching?
a-1,4 glycosidic bond
in glycogenlysis regulation, glycogen phosphorylase b is sensitive or insensitive to the external conditions?
sensitive
in glycogenlysis regulation, glycogen phosphorylase a is sensitive or insensitive to the external conditions?
insensitive (gas pedal)
what enzyme activates glycogen phosphorylase a and b?
a: phosphorylase kinase
b: PPP-1
What inactivates glycogen synthase in glycogenisis?
5 kinases
What activates glycogen synthase in glycogenisis?
PPP-1
What are the 5 kinases that inactivate glycogen synthase in glycogenisis?
PKA
phosphorylase kinase
Ca2+/calmodium
glycogen synthase kinase
AMP-dependent kinase
What is glycogenin?
primes glycogen synthesis by building out chain of glucose attached to its Tyr residue
What 3 regulation enzymes in glycolysis?
hexokinase
PFK-1
pyruvate kinase
What is the second messenger for epinephrine (B2)?
cAMP
what is the primary kinase for epinephrine (B2)?
PKA
What type of G coupled protein does epinephrine (B2) use?
Gs family
What is the second messenger for epinephrine (a2)?
IP3
What is the primary kinase for epinephrine (a2)?
PKC and CAM-PK/CA2+
What type of G coupled protein does epinephrine (a2) use?
Gq family
What is the second messenger of insulin?
PIP3
What is the primary kinase for insulin?
AKT
What is the name of the E1 PDH subunit?
pyruvate dehydrogenase
What is the name of the E2 PDH subunit?
dihydrolipoamide acetyltransferase
What is the name of the E3 PDH subunit?
dihydrolipoamide dehydrogenase
Is cofactor CoA transient or prosthetic and for which subunit?
transient E1
Is cofactor TPP transient or prosthetic and for which subunit?
prosthetic E2
Is cofactor lipoamide transient or prosthetic and for which subunit?
prosthetic E2
Is cofactor FAD transient or prosthetic and for which subunit?
prosthetic E3
Is cofactor NAD+ transient or prosthetic and for which subunit?
transient E3
What is the point of no return in the CAC?
when pyruvate to acetyl CoA
What is the first cofactor that combines with pyruvate pre citric acid cycle?
TPP
What is the second cofactor that combines with pyruvate pre citric acid cycle?
lipoamide
What is the only positive delta G in the CAC?
malate
What 3 enzymes turn NAD into NADH in the CAC cycle?
isocitrate DH
a-ketogluterate
malate DH
What 2 enzymes release carbon in the form of CO2?
isocitrate DH
a-ketogluterate DH
what is enzyme of the commitment step during the CAC?
isocitrate DH
what is the enzyme of the regulatory step in the CAC and has the same mechanism as PDH?
a-ketogluterate DH
What is the only membrane bound enzyme in the CAC?
succinate DH
What is the acronym for the name of the molecules in the CAC?
Can
I
Keep
Sell
Sex
For
Money
Officer?
what is the acronym for the type of enzyme used in each step of the CAC?
So
At
Disco
Devil
Sucked
Down
Five
Drinks
what enzyme in the CAC is referred to as catalytic perfection?
fumarase
increased cAMP production = increase/decrease of adenylyl cyclase?
increase
How many CO2 is made in one turn of the CAC?
2
How many NADH is made in one turn of the CAC?
3
How many FADH2 is made in one turn of the CAC?
1
How many ATP is made in one turn of the CAC?
1
How many GTP is made in one turn of the CAC?
1
does increased levels of ATP increase/decrease the level of PDH/CAC?
decrease
does increased levels of ADP/AMP increase/decrease the level of PDH/CAC?
increase
does increased levels of NAD increase/decrease the level of PDH/CAC?
increase
What are 3 inhibitors of CAC?
- NADH
- acetyl coA
- ATP
Why is NADH an inhibitor of CAC?
inhibits E3 (lipoamide cannot reoxidized)
why is acetyl coA an inhibitor of CAC?
inhibits E2 (competes with free floating CoA-SH)
Is PDH regulated by covalent modification?
yes
what enzyme of the CAC catalyzes hydrolysis of thioester?
citrate synthase
what enzyme is inhibited by succinyl-coA?
a-ketogluterate DH
what enzyme uses Fe clusters in the CAC?
acontiase
Increased PPP means that adenylyl cyclase is active or inactive?
inactive
increased glycogen synthease means adenylyl cyclase is active or inactive?
inactive
T/F: Under standard conditions, malate oxidation by NAD+ is energentically favored
false
T/F: insulin signaling decreases PDH phosphatase activity
false
T/F: reaction catalyzed by aconitase requires a 180 flip
true
T/F: PDH is found in the cytosol
false
T/F: can oxaloacetate be viewed as a catalyst
true
is PDH activated or inactivated when phosphorylated?
inactivated
what does pyruvate dehydrogenase kinase do?
phosphorylates PDH and makes it inactive
PDK 1 is present in what kind of cells?
panceratic beta cells
cardiomyocytes
PDK 2 is present in what kind of cells?
cardiomyocytes
hepatocytes