Final Exam 1 Flashcards
Genetics, Altered Cells, Immunology, Cancer, Fluids/Acid-Base, Neuro, Renal
<p>silent, missence, and nonsense are all what type of genetic mutation</p>
<p>base pair substitution</p>
<p>mutation -> new codon -> same AA</p>
<p>silent mutation</p>
<p>mutation -> new codon -> new AA</p>
<p>missense mutation</p>
<p>mutation -> new codon -> stop codon</p>
<p>nonsense mutation</p>
<p>insertion or deletion of 1 or more base pairs</p>
<p>frameshift mutation</p>
<p>Chromosomes and pairs of somatic cells</p>
<p>46 chromosomes in 23 pairs (diploid)</p>
<p>Chromosomes and pairs of gametes</p>
<p>23 chromosomes as singles (haploid)</p>
<p>cells w/ a multiple of the normal number of chromosomes</p>
<p>euploid cells</p>
<p>cells w/ compete extra sets of chromosomes</p>
<p>polyploidy (usually spontaneous aborted or stillborn)</p>
<p>describe the chromosomes in triploidy and tetraploidy cells</p>
<p>- triploidy = 3 complete sets of chromosomes- tetraploidy = 4 complete sets of chromosomes</p>
<p>a cell that does not contain a multiple of 23 chromosomes (missing or additional individual chromosomes)</p>
<p>aneuploidy</p>
<p>name 2 types of aneuploidy cells and which type is worse</p>
<p>monosomy and trisomy; monosomy is worse due to the lack of genetic material</p>
<p>aneuploidy is a result of what?</p>
<p>nondisjunction - homologous chromosomes or sister chromatids fail to separate during mitosis or meiosis</p>
<p>intellectual disability, distinctive facial features, and increased risk of leukemia</p>
<p>Down Syndrome/Trisomy 21</p>
<p>short stature, neck webbing, spaced nipples, usually sterile, but no intellectual disability</p>
<p>Turner Syndrome/Monosomy X</p>
<p>breast development, small testicles, typically sterile and some intellectual impairment</p>
<p>Klinefelter Syndrome/XXY condition</p>
<p>low birth weight, severe intellectual disability, microcephaly, heart defects, and characteristic high pitched cry</p>
<p>Chromosome 5 - deletion of short arm/Cri-du-chat syndrome</p>
<p>Name 4 types of abnormalities in chromosome structure</p>
<p>- deletion- duplication- inversion- translocation</p>
<p>exchange of material between 2 non-homologous chromosomes</p>
<p>reciprocal translocation</p>
<p>long arms of 2 non-homologous chromosomes combine at the centromere to form a single chromosome and the short arms are usually lost</p>
<p>Robertsonian translocation</p>
<p>On what chromosomes do Robersonian translocations occur?</p>
<p>13, 14, 15, 21, and 22</p>
<p>more common in males; causes intellectual disability (2nd most common under Down syndrome)</p>
<p>gap on long arm of X chromosome/Fragile X Syndrome</p>
<p>Patau syndrome</p>
<p>trisomy 13</p>
<p>Edward's syndrome</p>
<p>trisomy 18</p>
<p>what is the recurrence of autosomal dominant</p>
<p>50%</p>
<p>List 3 examples of autosomal dominant disorders</p>
<p>Huntington's disease, Von Willebrand's disease, and Marfan's syndrome</p>
<p>% of individuals w/ a genotype who also exhibit the expected phenotype</p>
<p>penetrance</p>
<p>individuals w/ disease-causing genotype but not the phenotype</p>
<p>incomplete penetrance</p>
<p>What is a common example of incomplete penetrance</p>
<p>retinoblastoma - about 90% who carry the gene will get the disease (90% penetrance)</p>
<p>What AD disease is known for its delayed age of onset (about 40 y/o)?</p>
<p>Huntington's disease</p>
<p>What is the recurrence of autosomal recessive?</p>
<p>50% carrier, 25% normal; 25% affected</p>
<p>List 3 examples of AR diseases</p>
<p>cystic fibrosis, sickle cell anemia, and albinism</p>
<p>List 3 examples of X-linked inheritance</p>
<p>color blindness, Duchenne muscular dystrophy, and hemophilia A</p>
<p>range of phenotypes that vary between patients and specific genotype</p>
<p>expressivity</p>
<p>Example of expressivity</p>
<p>neurofibromatosis</p>
<p>traits in which variations are caused by combined effect of multiple genes (polygenic)</p>
<p>multifactorial inhertence</p>
<p>certain number of factors/genes must be affected before phenotype is expressed</p>
<p>threshold of liability</p>
<p>What chromosome is cystic fibrosis linked to?</p>
<p>chromosome 7</p>
<p>Decrease or shrinkage of cell size</p>
<p>atrophy</p>
<p>Increase in size of cells</p>
<p>hypertrophy</p>
<p>Increase in the number of cells (from an increased rate of cellular division)</p>
<p>hyperplasia</p>
<p>Abnormal changes in size, shape, or organization of mature cells</p>
<p>dysplasia</p>
<p>Reversible replacement of one mature cell type by another</p>
<p>metaplasia</p>
<p>What 2 types of cellular adaptation occur in non dividing cells?</p>
<p>atrophy and hypertrophy</p>
<p>Physiologic vs Pathologic atrophy</p>
<p>- Physiologic: normal process that usually occurs in early development (ex. thymus in children)- Pathologic: due to decreased pressure, use, blood, nutrition, hormones, or stimulation (ex. disuse atrophy in skeletal muscle)</p>
<p>chronic malnutrition atrophy is often accompanied by what?</p>
<p>autophagy -> autophagic vacuoles contain cellular debris and enzymes</p>
<p>Physiologic vs Pathologic cardiac hypertrophy</p>
<p>Physiologic: temporary and preserves myocardial structure (ex. endurance training, postnatal development, and pregnancy)Pathologic: includes aging, strenuous exercise, sustained workload or stress</p>
<p>Explain compensatory hyperplasia. Where is it significant?</p>
<p>adaptive and allows for some organs to regenerate(epidermal and intestinal epithelia, hepatocytes, BM cells, and fibroblasts)</p>
<p>Explain hormonal hyperplasia</p>
<p>occurs in estrogen-dependent organs in response to hormonal stimulation (uterus and breast)</p>
<p>Explain pathologic hyperplasia</p>
<p>abnormal proliferation of normal cells (usually in response to excessive hormonal stimulation or GF on those cells)</p>
<p>2 most common examples of pathologic hyperplasia</p>
<p>- hyperplasia of the endometrium (over secretion of estrogen)- BPH (due to changes in hormonal balance)</p>
<p>Dysplasia is also known as what?</p>
<p>atypical hyperplasia -> not a true adaptive change</p>
<p>T/F: Dysplasia means the presence of cancer</p>
<p>False; dysplasia does NOT indicate cancer and may not progress to cancer if stimulus is removed early on</p>
<p>If metaplasia is not reversed, what can it advance to?</p>
<p>Dysplasia and possible cancerous transformations</p>
<p>Explain the general mechanisms of cellular injury (regardless of cause)</p>
<p>- depletion of ATP
- mitochondrial damage
- O2 and O2-derived free radical membrane damage
- protein folding defects
- DNA damage
- calcium level changes</p>
<p>Most common cause of hypoxia</p>
<p>ischemia (reduced blood supply)</p>
<p>What causes ischemia</p>
<p>narrowing of arteries (arteriosclerosis) or complete occlusion by clots (thrombosis)</p>
<p>Explain what causes a cell to swell w/ hypoxic injury</p>
<p>decreased mitochondrial O2 -> decreased ATP -> Na/K pump failure -> increased intracellular Na -> increased intracellular H2O -> swelling</p>
<p>Explain what causes a decrease in protein synthesis w/ cellular hypoxic injury</p>
<p>increase intracellular H20 -> dilation of ER -> detachment of ribosomes</p>
<p>Explain what causes nuclear chromatin clumping w/ cellular hypoxic injury</p>
<p>decrease in O2 -> decrease in ATP -> increase anaerobic glycolysis -> decrease glycogen -> increase lactate -> decrease pH -> chromatin clumping &amp; DNA damage</p>
<p>Explain changes to Na, K, and Ca during cellular hypoxic injury</p>
<p>- increased intracellular Na- increased extracellular K- increased intracellular Ca</p>
<p>Where is intracellular Ca released from?</p>
<p>mitochondria and smooth ER</p>
<p>Name 4 mechanisms for ischemia-reperfusion injury</p>
<p>- oxidative stress- increased intracellular Ca- inflammation- complement activation</p>
<p>Name 3 types of reactive oxygen species (ROS)</p>
<p>- hydroxyl radical (OH-)- superoxide radical (O-)- hydrogen peroxide (H2O2)</p>
<p>How does cell structure change after reperfusion injury?</p>
<p>ischemic cell = swollen
| reperfusion injured cell = necrotic</p>
<p>main systems affected by lead (Pb)</p>
<p>nervous system and blood</p>
<p>carbon tetrachloride (CCl4) affects what organ</p>
<p>liver</p>
<p>Explain how CO causes hypoxic injury</p>
<p>has a higher affinity for hemoglobin than O2 -> carboxyhemoglobin</p>
<p>Sxs of CO poisoning</p>
<p>dizziness, weakness, N/V, headache, tinnitus, confusion, and chest pain</p>
<p>Primary systems affected by ethanol</p>
<p>brain and liver</p>
<p>What nutrition deficiencies are associated w/ ethanol?</p>
<p>Mg, B6, thiamine, and phosphorus; folic acid is a problem for chronic drinkers</p>
<p>bleeding into skin or underlying tissues -> takes time to appear</p>
<p>contusion (bruise)</p>
<p>collection of blood in soft tissue that appears quickly</p>
<p>hematoma</p>
<p>wound is longer than it is deep -> usually has significant external bleeding w/ little internal bleeding</p>
<p>incised wound</p>
<p>penetrating sharp-force injury deeper than it is long</p>
<p>stab wound</p>
<p>produced by items w/ sharp points but dull edges (ex. stepping on a nail)</p>
<p>puncture wound</p>
<p>What will affect the appearance of an entrance gunshot wound?</p>
<p>range of the gunshot</p>
<p>What is seen w/ contact range entrance gunshot wound?</p>
<p>- searing of the edges- blowback (gaping or jagged)- muzzle imprints</p>
<p>What is seen w/ intermediate range entrance gunshot wound?</p>
<p>- tattooing/stippling: fragments of gunpowder abrade but don't enter the skin</p>
<p>appearance is the same regardless of range</p>
<p>indeterminate range entrance wound AND exit wound</p>
<p>Necrosis vs Apoptosis</p>
<p>- Necrosis: unprogrammed death; cellular swelling -> lysis; inflammation; many cells affected
- Apoptosis: programmed, organized disassembly; membrane bound shrinkage; no inflammation; one cell or small clusters</p>
<p>nucleus gets smaller -> DNA condenses into shrunken particles</p>
<p>pyknosis</p>
<p>fading away of nuclear envelope and nuclear material</p>
<p>karyolysis</p>
<p>nuclear fragmentation</p>
<p>karyorrhexis</p>
<p>Explain coagulative necrosis and where it occurs</p>
<p>- ischemia -> decrease pH -> protein degeneration -> albumin becomes firm and opaque</p>
<p>- occurs inkidneys, heart, adrenal glands</p>
<p>Explain liquefaction necrosis and where it occurs</p>
<p>- autolysis (hydrolytic enzymes) and heterolysis (bacterial infection) -> tissue becomes soft, liquefies, and segregates -> forms cysts</p>
<p>- occurs inneurons and glial cells of the brain</p>
<p>Types of bacteria involved in liquefaction necrosis?</p>
<p>- Staph- Strep- E. Coli</p>
<p>Explain caseous necrosis</p>
<p>- mycobacterium (TB) is walled off in a granuloma -> cells disintegrate but not completely digested (combo of coagulative and liquefaction) - will resemble cottage cheese (soft and granular)</p>
<p>Explain fat necrosis and where it occurs</p>
<p>- occurs by lipases -> break down triglycerides -> release FAs that combine w/ Ca, Mg, and Na (saponification) -> white and chalky</p>
<p>- occurs in thebreast, pancreas, and other ABD organs</p>
<p>Dry vs wet gangrene</p>
<p>- Dry: poor perfusion (coagulative necrosis)- Wet: poor perfusion + pyogenic infection (liquefactive necrosis)</p>
<p>Explain gas gangrene</p>
<p>caused by species of Clostridium -> produces hydrolytic enzymes and toxins -> destroy connective tissue and membranes -> gas bubble form in muscle cells -> death caused by shock</p>
<p>What occurs during algor mortis?</p>
<p>- body temp decreases 1 degree per hour- by 24 hours -> body temp = environment</p>
<p>What is the main event of livor mortis and how it is physically seen?</p>
<p>- blood pools at the lowest point of the body (due to gravity)- purple discoloration where blood pools (line of demarcation)- can see pupils dilate and become nonreactive to light due to decreased retinal pressure (decrease muscle tension)</p>
<p>What is the timeframe for rigor mortis? What causes rigor mortis?</p>
<p>- starts within 6 hours after death and lasts for approximately 36 hours (then body becomes flaccid)</p>
<p>-acid builds up in muscles -> delete ATP -> myosin doesn't work for relaxation -> rigid muscles (small muscles first)</p>
<p>What is postmortem autolysis (putrefaction)?</p>
<p>breakdown of tissues that occurs between 24-48 hours (all cells start necrosing)</p>
<p>What speeds up/slows down the process of postmortem autolysis?</p>
<p>- warm environment speeds it up- cold slows it down</p>
<p>Lines of defense (3)</p>
<p>- 1st: innate (natura/native) immunity- 2nd: inflammation- 3rd: adaptive (acquired) immunity</p>
<p>What 3 things are part of innate immunity?</p>
<p>- physical barriers- epithelial cell-derived chemicals- normal microbiome</p>
<p>List 4 characteristics of the inflammatory response</p>
<p>- occurs in vascularized tissues- activates rapidly (in seconds) after damage occurs- depends on activity of both cellular and chemical components- nonspecific</p>
<p>At the beginning of the inflammatory reaction, what are 3 vascular responses that occur?</p>
<p>- vasodilation- increased vascular permeability- WBC adherence to the inner walls of vessels and migration through vessels</p>
<p>What causes edema at the site of injury?</p>
<p>increased vascular permeability -> plasma proteins leak from capillary bed -> oncotic pressure -> fluid will follow protein out of capillary -> edema</p>
<p>Who are the 1st and 2nd responders at a site of inflammation?</p>
<p>1st responder: neutrophil2nd responder: macrophage (from monocyte)</p>
<p>List the 3 plasma systems</p>
<p>- complement- clotting- kinin</p>
<p>Symptoms of acute inflammatory response and causes?</p>
<p>- vasodilation (erythema/warmth)- vascular permeability (edema)- cellular infiltration (pus)- thrombosis (clots) -> helps encapsulate bacteria- stimulation of nerve endings by kinin (pain)</p>
<p>cells filled w/ granules and located in loose connective tissue close to blood vessels</p>
<p>mast cells</p>
<p>What 3 types of granules are released by mast cells?</p>
<p>- histamine- chemotactic factor for neutrophils- chemotactic factor for eosinophils</p>
<p>List 3 mediators synthesized by mast cells</p>
<p>- platelet activating factor (PAF)- prostaglandins- leukotrienes</p>
<p>Function of PAF</p>
<p>platelet activation and vasodilation</p>
<p>Function of prostaglandins</p>
<p>increased vascular permeability, neutrophil chemotaxis, and pain</p>
<p>Explain histamine's function after being released from mast cells</p>
<p>vasoactive: temporary rapid constriction of large blood vessels and dilation of post-capillary venues; retraction of endothelial cells lining capillaries (junctions)</p>
<p>Explain the compliment system</p>
<p>- C3 -> C3b + C3a- C3b -> C5 -> C5b + C5a- C5b -> C6-9 -> membrane attack complex- MAC forms pores in pathogen membrane to damage it</p>
<p>What in the compliment system creates opsonin? What is the function of opsonin?</p>
<p>- C3b- coats surface of bacteria and increases their susceptibility to phagocytosis</p>
<p>potent anaphylatoxin in the compliment system -> mass cell release of histamine</p>
<p>C3a</p>
<p>Anaphylatoxin and chemotactic factor in compliment system -> leukocyte (neutrophil) migration</p>
<p>C5a</p>
<p>main protein in a blood clot</p>
<p>fibrin</p>
<p>What activates the extrinsic pathway of the clotting system?</p>
<p>tissue factor (TF) - released by damaged endothelial cells in blood vessels (external trauma)</p>
<p>What activates the internal pathway of the clotting system?</p>
<p>activated when the vessel wall is damaged (trauma inside the blood vessels)</p>
<p>- Factor unique to extrinsic pathway- Factor unique to intrinsic pathway- Factor activated by both pathways</p>
<p>- Extrinsic: VIIa- Intrinsic: XII (Hageman Factor) -> XIIa- Both: Xa</p>
<p>Describe the common pathway of the clotting cascade</p>
<p>Xa -> thrombin -> fibrinogen -> fibrin -> blood clot</p>
<p>functions to activate and assist inflammatory cells; interacts closely w/ coagulation system</p>
<p>Kinin system</p>
<p>What activates the kinin system?</p>
<p>activation of Hageman factor (XII) to XIIa (aka prekallikrein)</p>
<p>Functions of bradykinin</p>
<p>- vasodilation (like histamine)- induce pain (w/ prostaglandins)- smooth muscle contraction- increase vascular permeability- leukocyte chemotaxis</p>
<p>Cytokines that cause vasodilation (3)</p>
<p>- prostaglandins- histamine- NO</p>
<p>Cytokines that cause vascular permeability (4)</p>
<p>- histamine- bradykinin- leukotrienes- PAF</p>
<p>Cytokines that cause pain (2)</p>
<p>- prostaglandins- bradykinin</p>
<p>Cytokines that cause fever (4)</p>
<p>- IL-1- IL-6- TNF-a- prostaglandins</p>
<p>Cytokines that activate leukocytes (2)</p>
<p>- IL-1- TNF-a</p>
<p>activate T-cells without MHC-II or antigen to activate them -> widespread activation of immune system</p>
<p>Superantigens</p>
<p>List acute phase reactants (5)</p>
<p>IL-1, IL-6, IL-8, TNF-a, and C-reactive protein</p>
<p>What does C-reactive protein tell about inflammation</p>
<p>global test for inflammation (doesn't tell cause or location; only that it exists)</p>
<p>increased neutrophils?</p>
<p>acute bacteria/acute inflammation</p>
<p>increased lymphocytes?</p>
<p>viral infection/chronic bacterial infection</p>
<p>increased monocytes?</p>
<p>inflammation</p>
<p>increased basophils?</p>
<p>allergic reaction</p>
<p>increased eosinophils?</p>
<p>parasitic infection</p>
<p>type of innate lymphocyte</p>
<p>natural killer cell (NK cell)</p>
<p>How do cytokines limit inflammation?</p>
<p>- inhibit production- inhibit macrophage proliferation- destroy histamine and leukotrienes</p>
<p>How do cytokines help w/ repair and healing?</p>
<p>- activate macrophages- stimulate fibroblast growth- stimulate endothelial growth</p>
<p>Explain VEGF function and how it relates to cancer and chemo</p>
<p>- VEGF is angiogenic -> vascular growth- found in some cancers to help them develop blood supply- some chemo targets this -> will also delay healing</p>
<p>What does the erythrocyte sedimentation rate test?</p>
<p>how fast RBCs settle at the bottom of the test tube -> faster may mean inflammation</p>
<p>How do cytokines help w/ phagocytosis?</p>
<p>- adherence and diapedesis- chemotaxis- opsonins- activate and increase macrophages</p>
<p>Type I interferons (IFN)</p>
<p>INF-a and INF-b</p>
<p>Type II interferon (IFN)</p>
<p>IFN-y</p>
<p>IL that is pro inflammatory an endogenous pyrogen (causes fever)</p>
<p>IL-1</p>
<p>IL that directly induces hepatocytes to produce proteins needed for inflammation and stimulate differentiation and growth of BM cells</p>
<p>IL-6</p>
<p>List 3 systemic effects of TNF-a</p>
<p>- induces fever (endogenous pyrogen)- increased synthesis of inflammation proteins by liver- muscle wasting (cachexia) and intravascular thrombosis in cases of severe infection/cancer</p>
<p>What IL is anti-inflammatory?</p>
<p>IL-10</p>
<p>What cells secrete TNF-a?</p>
<p>macrophages</p>
<p>macrophages that predominate in early inflammation and become a component of purulent exudate</p>
<p>neutrophils (PMNs)</p>
<p>Life cycle of monocytes</p>
<p>produced in the BM -> travel to site of inflammation about 24 hours after neutrophils -> develop into macrophages</p>
<p>defense against parasites and regulation of vascular mediators</p>
<p>eosinophils</p>
<p>adherence of leukocytes to endothelial cells</p>
<p>margination</p>
<p>emigration of cells through endothelial junctions</p>
<p>diapedesis</p>
<p>protein filled watery exudate that indicates early inflammation</p>
<p>serous</p>
<p>thick, clotted exudate -> indicates more advanced inflammation</p>
<p>fibrinous</p>
<p>pus filled exudate that indicates bacterial infection or inflammation (supperative)</p>
<p>purulent</p>
<p>2 types of exudate that indicate bleeding</p>
<p>serosanguinous and sanguinous</p>
<p>Risks that lead to dysfunctional wound healing</p>
<p>- hemorrhage- fibrous adhesion- hypovolemia- lack of nutrients- poor control of glucose levels- infection</p>
<p>raised scar from original skin level (4mm above skin)</p>
<p>keloid scar</p>
<p>scar that is larger than it should be</p>
<p>hypertrophic</p>
<p>process by which the extensive diversity of antigen receptors on B and T cells is established</p>
<p>clonal diversity</p>
<p>develop from B cells -> produce antibodies</p>
<p>plasma cells</p>
<p>T cells that identify and kill target cells</p>
<p>cytotoxic T cells</p>
<p>come from both B and T cells and activate rapidly during a second infection w/ the same microbe</p>
<p>memory cells</p>
<p>infection/exposure immunity</p>
<p>active natural</p>
<p>vaccine immunity</p>
<p>active artificial</p>
<p>maternal immunity</p>
<p>passive natural</p>
<p>IVIg (immunoglobulins/serum/antibodies)</p>
<p>passive artificial</p>
<p>T/F: passive immunity does not lead to memory</p>
<p>True</p>
<p>3 parts to an antibody</p>
<p>- 2 identical antigen binding fragments (Fab)- Fc portion that is responsible for most biological functions of antibody</p>
<p>How do Abs indirectly affect Ags</p>
<p>activate innate immune system -> complement and phagocytes</p>
<p>best complement activating antibody</p>
<p>IgM</p>
<p>best opsonin antibody</p>
<p>IgG</p>
<p>antibody that is part of mucosal immunity</p>
<p>IgA</p>
<p>antibody that responds to allergic reactions and parasites to activate mast cells</p>
<p>IgE</p>
<p>only antibody that crosses the placenta</p>
<p>IgG</p>
<p>processing of antigen and gene rearrangement for a specific immune response</p>
<p>clonal selection</p>
<p>Which cells are APCs</p>
<p>dendritic cells, macrophages, and B cells</p>
<p>What cells are HLA class II found on</p>
<p>all APCs</p>
<p>What cells are HLA class I found on</p>
<p>all nucleated cells</p>
<p>What is presented by each class of HLA and to what cells are they presented?</p>
<p>- HLA I: present endogenous antigens for cytotoxic T cells (CD8) -> gives thumbs up that the cell is okay- HLA II: present exogenous antigens ingested to T-helper cells (CD4) -> activate adaptive immunity</p>
<p>T/F: APCs have both HLA I and HLA II on their surface</p>
<p>True: all nucleated cells have HLA I</p>
<p>What immunoglobulins do B cells produce before class switching?</p>
<p>IgM and IgD</p>