Exam 4 Flashcards
An organism’s phylogeny describes what?
A. acquisition of genes by horizontal gene transfer
B. genomic G+C content
C. chemical composition (percentage of C, N, P, etc.)
D. codon usage compared to other organisms
E. genetic relatedness to other species
E. genetic relatedness to other species
A(n) _____ is a group of organisms that all share a common ancestor, not shared with any other organism outside of its group.
clade
Which of the following does not represent a mechanism of horizontal gene transfer among prokaryotes?
A. acquisition of transposable elements
B. transduction
C. transformation
D. conjugal transfer of plasmid DNA
E. binary fission
E. binary fission
Which of the following conditions would most strongly favor adaptive evolution in bacteria?
A. continuous exposure to antibiotics
B. growth in a nutrient-rich broth
C. growth at moderate temperatures and pH
D. nonobligatory commensal relationships
E. absence of predators or viruses
A. continuous exposure to antibiotics
Which of the following traits of bacterial cells differ significantly from the other domains of life?
A. nature of genetic code
B. phospholipids in membrane
C. peptidoglycan in cell envelope
D. type of RNA polymerase
E. translation elongation factors
F. DNA as genetic material
C. peptidoglycan in cell envelope
D. type of RNA polymerase
E. translation elongation factors
What takes place inside of cyanobacterial carboxysomes?
A. buoyancy regulation
B. Krebs cycle
C. nitrogen fixation
D. carbon fixation
E. light-reactions of photosynthesis
D. carbon fixation
The two major genera of Gram-positive bacteria include the _______________ , which contains the endospore-forming genera (e.g., Bacillus and Clostridium), and the _______________, which contains some filamentous forms (e.g., Streptomyces) that produce exospores.
A. low GC Actinobacteria ; high GC Firmicutes
B. high GC Actinobacteria ; low GC Firmicutes
C. high GC Firmicutes ; low GC Actinobacteria
D. low GC Firmicutes ; high GC Actinobacteria
D. low GC Firmicutes ; high GC Actinobacteria
Nitrosomas spp. are betaproteobacteria which mediate which important step in the nitrogen cycle?
A. ammonia oxidation
B. ammonification
C. nitrate reduction
D. denitrification
E. nitrite oxidation
A. ammonia oxidation
The cyanobacteria are thought to have given rise to which eukaryotic organelle?
A. Lysosomes
B. The nucleus
C. Chloroplasts
D. Mitochondria
C. Chloroplasts
A Gram-positive bacterium with a low GC content may be a(n)
A. Nitrospirae.
B. Actinobacteria.
C. Firmicute.
D. Proteobacteria.
C. Firmicute.
An example of a Gram-positive, anaerobic, spore-forming microbe is
A. Anabaena.
B. Salmonella.
C. Clostridium.
D. Lactobacillus.
C. Clostridium.
The closest relatives of mitochondria are found in which bacteria class?
A. Gammaproteobacteria
B. Betaproteobacteria
C. Deltaproteobacteria
D. Alphaproteobacteria
D. Alphaproteobacteria
Bacteria used in wastewater treatment include those that can convert ammonia and nitrite to nitrate, decreasing the reduced nitrogen content of the sewage. These bacteria, such as Nitrosomonas spp., often belong in
A. Deltaproteobacteria.
B. Gammaproteobacteria.
C. Alphaproteobacteria.
D. Betaproteobacteria.
D. Betaproteobacteria.
The process of methanogenesis uses a series of specific cofactors to carry each carbon from CO2 (or another substrate) as it becomes progressively reduced by hydrogen. Which of the following is not a cofactor unique to methanogens?
A. coenzyme M (CoM)
B. methanofuran (MFR)
C. tetrahydromethanopterin (H4MPT)
D. cofactor F420 (F420)
E. flavin adenine dinucleotide (FAD+)
E. flavin adenine dinucleotide (FAD+)
With respect to O2 requirements, most methanogens are which of the following?
A. facultative anaerobes
B. strict aerobes
C. strict anaerobes
D. aerotolerant
C. strict anaerobes
Methanogenic bacteria are which of the following?
A. strict aerobes that obtain energy through the synthesis of methane
B. strict anaerobes that obtain energy through the consumption of methane
C. strict anaerobes that obtain energy through the synthesis of methane
D. strict aerobes that obtain energy through the consumption of methane
C. strict anaerobes that obtain energy through the synthesis of methane
Which of the following is true of all archaeans discovered to date?
A. They are unable to synthesize proteins.
B. None of them are human pathogens.
C. They are extremophiles.
D. They are more closely related to bacteria than to eukaryotes.
B. None of them are human pathogens.
Which of the following produces mushroom fruiting bodies?
A. Basidiomycota
B. Zygomycota
C. Ascomycota
D. Chytridiomycota
A. Basidiomycota
One reason why fungi cannot perform phagocytosis of food particles is that they
A. do not encounter food particles in their environments.
B. do not need to, because they are photosynthetic.
C. are surrounded by a stiff cell wall.
D. lack necessary cytoskeletal components such as actin.
C. are surrounded by a stiff cell wall.
Which of the following structures is most likely to be a component of both chytrid zoospores and motile animal cells?
A. Flagella
B. Cilia
C. Pseudopods
D. Frustule
A. Flagella
Which of the following characteristics are typical of fungi?
A. Mycelium
B. Mixotroph
C. Chloroplasts
D. Cell wall
E. Multicellular
F. Unicellular
A. Mycelium
D. Cell wall
E. Multicellular
F. Unicellular
Methanogens usually require
A. acidic conditions.
B. methane as a substrate.
C. association with bacterial species.
D. high temperatures.
C. association with bacterial species.
Life on Earth relies on the production, consumption, and recycling of nutrients. The position that an organism occupies within a food web is referred to as its _____.
trophic level
What are three types of assimilatory processes?
Photosynthesis
Chemoautotrophy
Nitrogen fixation
What are three types of dissimilatory processes?
Decomposition
Nitrification
Aerobic respiration of organic compounds
Which of the following represent prokaryotic primary producers?
A. moss
B. seaweed
C. viruses
D. protists
E. lithoautotrophs
F. fungi
G. cyanobacteria
E. lithoautotrophs
G. cyanobacteria
What is the order of the food web starting from primary producer?
Primary producer
Grazers
Primary predator
Secondary predator
Decomposers
Which of the following symbionts may be found in lichens?
A. chemoautotroph
B. cyanobacterium
C. zooxanthella
D. alga
E. moss
F. fungus
B. cyanobacterium
D. alga
F. fungus
Fungi that invade plant cells in their roots but do establish a mutualistic relationship are
A. endomycorrhizae.
B. ectomycorrhizae.
C. opportunistic pathogens.
D. generalists in terms of their mutualistic relationships.
A. endomycorrhizae.
Soil food webs differ from marine food webs in that
A. oxygen is present throughout.
B. the role of bacteria is greater than in all trophic levels.
C. decomposition is much less important.
D. primary production is done mostly by plants.
D. primary production is done mostly by plants.
Suppose various legume plant parts are rubbed with a protein gel. Which plant part is most likely to test positive for nitrogenase?
A. Roots
B. Leaves
C. Stems
D. Flowers
A. Roots
Which of the following does NOT contribute to eutrophication?
A. Antibiotic runoff
B. Excessive nitrogen inputs
C. Organic pollutants
D. Algal blooms
A. Antibiotic runoff
An organism classified as a barophile is most likely to be found in which habitat?
A. Euphotic zone
B. Benthic zone
C. Epilimnion
D. Aerated horizon
B. Benthic zone
How do viruses contribute in the food web?
Decompose bacteria
Biochemical oxygen demand (BOD) is controlled by the concentration of
A. multicellular organisms.
B. benthic microorganisms.
C. heterotrophic microorganisms.
D. autotrophic microorganisms.
C. heterotrophic microorganisms.
Syntrophy means
A. coupled metabolic pathways in one organism to achieve negative ΔG.
B. two organisms eating at the same trophic level.
C. using two metabolic pathways simultaneously.
D. multiple organisms needed to complete a metabolic pathway with negative ΔG.
D. multiple organisms needed to complete a metabolic pathway with negative ΔG.
Lichens are an example of a mutualism between an alga and a(n)
A. animal.
B. bacterium.
C. fungus.
D. plant.
C. fungus.
The major primary producers in terrestrial ecosystems are
A. fungi.
B. cyanobacteria.
C. earthworms.
D. land plants.
D. land plants.
A single-celled eukaryote feeds on cyanobacteria (photoautotrophs). The cyanobacteria are considered
A. grazers.
B. decomposers.
C. predators.
D. primary producers.
D. primary producers.
An organism fixes nitrogen for the production of amino acids. This is an example of
A. assimilation.
B. habitat.
C. dissimilation.
D. predation.
A. assimilation.
Despite the fact that the Earth’s crust contains approximately 3,000 times more carbon than the oceans, the oceans are a more important carbon reservoir for most living things. Why is this?
A. The carbon in crustal rock cannot be fixed by living organisms.
B. The oceans serve as a carbon source but not a carbon sink.
C. Carbon cycles quickly between crustal rock and living things.
D. Carbon cycles quickly between the oceans and living things.
D. Carbon cycles quickly between the oceans and living things.
What is the ranking of nitrogenous compounds from least oxidized to most oxidized?
NH3
N2
NO2-
NO3-
What are the types of carbon reservoirs from smallest amount to largest amount of carbon?
Atmosphere
Fossil fuel
Ocean
Earth’s crust
Which reservoir cycles carbon least rapidly? Middle? Most?
Earth’s crust
Oceans
Atmosphere
What are some factors of aerobic carbon cycling?
Supports higher rates of biomass production
Occurs in the photic zone of the ocean
Includes photosynthetic fixation of CO2
What are some factors of anaerobic carbon cycling?
Includes fermentation
Favors incomplete breakdown of organic material
Includes respiration that uses nitrate, Fe3+, and sulfate as electron acceptors
What process takes CO2+H2O and converts it to CH2O?
Photosynthesis
What process takes CH2O and converts it to CO2+H2O?
Aerobic respiration
What process takes CH2O and converts it to alcohols and acids (H2+CO2)?
Fermentation
What process takes alcohols and acids (H2+CO2) and converts them to CH2O?
Anaerobic lithotrophy
______ is a fully reduced form of carbon that accumulates deep underground due to limiting ______.
Methane
O2
Which of the following statements is true about the relationship between the concentration of organic compounds in a body of water and its biochemical oxygen demand (BOD)?
A. As the concentration of organic compounds decreases, the BOD increases.
B. The concentration of organic compounds does not affect the BOD.
C. As the concentration of organic compounds increases, the BOD decreases.
D. As the concentration of organic compounds increases, so does the BOD.
D. As the concentration of organic compounds increases, so does the BOD.
Which of the following is the most direct cause of a rise in biochemical oxygen demand (BOD) in bodies of water?
A. respiration by heterotrophs
B. chemosynthesis by lithotrophs
C. methanogenesis by methanogens
D. photosynthesis by cyanobacteria
A. respiration by heterotrophs
The hydrologic and carbon cycles interact. Organic carbon-containing compounds in water act as fuel for __________ by aquatic organisms. This process uses __________ and if the process occurs at too great a rate, __________ dead zones occur in the body of water.
A. photosynthesis, carbon dioxide, oxygenated
B. respiration, oxygen, hypoxic
C. respiration, carbon dioxide, oxygenated
D. photosynthesis, oxygen, hypoxic
B. respiration, oxygen, hypoxic
What are the three steps in the “nitrogen triangle”? Place them in the order needed starting from N2.
Nitrogen fixation
Aerobic nitrification
Anaerobic denitrification
Which of the following processes of the nitrogen cycle is an aerobic process?
A. nitrogen fixation
B. nitrification
C. anammox reaction
D. denitrification
B. nitrification
Which of the following nitrogen cycle processes returns N2 to the atmosphere?
A. denitrification
B. nitrogen fixation
C. anammox reaction
D. nitrification
A. denitrification
C. anammox reaction
Which of the following is the most oxidized form of carbon?
A. Methane (CH4)
B. Methanol (CH3OH)
C. Formic acid (HCOOH)
D. Carbon dioxide (CO2)
D. Carbon dioxide (CO2)
In a wastewater treatment plant, microbes are used primarily during __________ treatment.
A. secondary
B. quaternary
C. primary
D. tertiary
A. secondary
The primary source and sink of nitrogen is
A. the ocean.
B. the atmosphere.
C. forests.
D. soil.
B. the atmosphere.
Nitrogen is often a limiting nutrient for plant growth because
A. human activities have reduced the nitrogen concentration in the environment.
B. plants cannot use the most abundant form of nitrogen (N2).
C. it is a small percentage of the atmosphere.
D. nitrogen is not transported into plant cells efficiently.
B. plants cannot use the most abundant form of nitrogen (N2).
Cellular nitrogen fixation
A. can occur in both prokaryotes and eukaryotes.
B. leads to the oxidation of nitrogen.
C. occurs in the absence of an enzyme.
D. requires a lot of energy.
D. requires a lot of energy.
Which of the following is a true statement about dissimilatory nitrate reduction?
A. It occurs mainly in the presence of oxygen gas (O2).
B. Nitrate acts as an electron donor.
C. It is not an important pathway in the biogeochemical nitrogen cycle.
D. It can lead to the production of N2 or ammonia.
D. It can lead to the production of N2 or ammonia.
Which of the following is the most oxidized form of nitrogen?
A. NO
B. NH3
C. NO2–
D. NO3–
D. NO3–
Define clade:
group of species that once shared a common ancestor
Define taxonomy:
description of life forms and their classification into groups
What is the order of taxonomy from largest to smallest?
class-order-family-genus-species
Define horizontal gene transfer:
transfer of one or more genes between unrelated species
Define vertical gene transfer:
linked to DNA replication and cell duration
WHOLE GENOME copied and passed to offspring
Define symbiosis:
association between two or more species