Exam 2: Physiology Flashcards

1
Q

Intracellular vs Extracellular

Ion Concentrations

A

Represent steady-state conditions.

Established and maintained by permeability properties of lipid bilayer and transport systems.

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2
Q

Membrane Structure

A

Held together by non-covalent interactions.

Membranes are:

Dynamic

Fluid

Asymmetrical

Amphiphathic

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3
Q

Membrane Components

A

Major components are lipids and proteins.

  • Lipids
    • Glycerophospholipids ⇒ most abundant
    • Sphingolipids
    • Cholesterol
  • Proteins
    • Integral
      • requires disruption with detergents to release
    • Peripheral
      • loosely attached
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4
Q

Glycerophospholipids

Structure

A
  • Glycerol backbone
  • Two long-chain fatty acids attached at C1 and C2
    • C1 ⇒ saturated FA ⇒ straight
    • C2 ⇒ unsaturated FA ⇒ kinked
  • Phosphate group attached at C3
    • Free acid
    • Ester with an alcohol
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5
Q

Glycerophospholipids

Headgroups

A

Net charge depends on the headgroup.

Affects the nature of the membrane surface.

Phosphatidylethanolamine (PE) and Phosphatidylcholine (PC) most abundant.

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6
Q

Uncharged

Membrane Lipids

A
  1. Phosphatidylcholine (PC)
  2. Phosphatidylethanolamine (PE)
  3. Sphingomyelin
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7
Q

Negatively Charged

Membrane Lipids

A
  1. Phosphatidylserine (PS)
  2. Phosphatidylglycerol (PG)
  3. Phosphatidylinositol (PI)
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8
Q

Sphingolipids

A

Derived from amino alcohol sphingosine.

  • Sphingomyelin ⇒ most common
    • polar choline head group
    • two acyl tails
  • Glycosphingolipids
    • one or more sugar residues attached
    • Gangliosides **
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9
Q

Gangliosides

A

Type of glycosphingolipid.

  • Oligosaccharide group with one or more N-acetylnuraminic acid residues
  • Carb portion protrudes out from membrane
    • Used in cell-cell recognition
    • Binds cholera toxin
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10
Q

Cholesterol

A

Steroid Alcohol

  • ↓ membrane fluidity
  • ↓ mobility of membrane components
    • ↓ deformibility
  • ↓ membrane permeability
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11
Q

Peripheral Membrane Proteins

A
  • Loosely attached by:
    • interaction with integral protein
    • electrostatic forces
    • hydrophobic domain
    • noncovalent binding to inositol head group of PI
    • lipid-achor linkage
  • Can usually be released without membrane disruption
    • alter pH
    • alter ionic strength
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12
Q

Lipid-Anchor

Linkages

A

Attaches peripheral membrane protein to membrane via a lipid covalently linked to the protein.

Several different linkages found:

  1. Glycosylphosphatidylinositol (GPI) anchor
    • PI attached to glycan ⇒ covalently linked to protein
    • Controls localization of a particular protein on the membrane
    • Detachment and reattachment of anchor ∆ protein activity
  2. Acyl-amide N-terminal linkage
  3. Thioester-linked acyl anchors
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13
Q

Membrane Fluidity

&

Affecting Factors

A

Individual lipids can diffuse laterally in the membrane.

Melting temperature (Tm)

Above ⇒ acyl side chains fluid and disordered ⇒ allows motion

Below ⇒ chains gel-like ⇒ movement restricted

Other factors affecting fluidity:

Degree & type of acyl chain unsaturation ⇒ DB ↑ fluidity

Acyl chain length ⇒ long chains less fluid

Cholesterol content ⇒ ↑ fluidity

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14
Q

Membrane Lipid

Distribution

A

Differences in bulk lipid composition among various cell membranes.

Differences in lipid composition between two leaflets.

Includes different classes of lipids and breakdown of individual phospholipids.

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15
Q

Membrane Lipid

Assemetry

A

Asymmetry established during membrane biogenesis.

Maintained by specific lipid transporter proteins:

  • Flippases ⇒ move lipids from the outside to the inside face
    • Aminophospholipid translocase
      • transports PS and PE to inner leaflet
  • Floppases ⇒ move lipids from the inside face to the outside face
  • Scramblases ⇒ randomize lipids between leaflets
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16
Q

Lipid Rafts

A

Microdomains where specific lipids can be found.

  • 10-200 nm
  • Rich in cholesterol and sphingolipids
  • Longer acyl chains ⇒ thicker membrane
  • Rafts can move about and merge
  • Enrichment of certain proteins in lipid rafts facilitates activity
    • spatial proximity
    • altered lipid environment
    • Ex. GPI anchors and signal transduction receptors
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17
Q

Caveolae

A

Special type of lipid raft.

  • Small invaginations in plasma membrane
  • Cavolins localized here
    • lipid-modified membrane proteins that bind cholesterol
    • their presence leads to invagination
    • involved with endocytosis
    • involved with some signal transduction pathways
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18
Q

Creutzfeldt-Jakob Spongiform Encephalopathy

A

Caused by an infectious protein ⇒ prion

Prion is a GPI-anchored protein found in lipid rafts.

Internalization by macropinocytosis one of the initial steps in disease process.

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19
Q

Diffusion

Definition

A

The random movement of a molecule fueled by thermal energy of the normal kinetic motion of matter.

Continues until equilibrium is reached.

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20
Q

Simple Diffusion

A

Movement directly through the lipid bilayer.

Driven by the concentration gradient.

At equilibrium, molecules continue to cross the membrane but no net movement occurs.

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21
Q

Fick’s First Law of Diffusion

A
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22
Q

Partition Coefficient (K)

A
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23
Q

Permeability Coefficient (P)

A
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24
Q

Overton’s Law

A

Permeability of coefficients of solutes that have approx. the same diffusion coefficients depends directly on their partition coefficients.

Applies to small molecules ⇒ > 4-5 carbons

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25
Restricted Diffusion
Channel proteins present in lipid bilayers that provide diffusional pathways. Rates of diffusion of molecules strongly influenced by molecular size.
26
Clinically Relevant Transporter Examples
1. **Diuretics** ⇒ furosemide * Inhibit Na/K/2Cl co-transporter in loop of Henle * Used to treat HTN 2. **L-DOPA** * Transported by neutral amino acid transports in CNS * Converted to dopamine * Treatment for Parkinson's disease 3. **Proton pump inhibitors (PPI)** ⇒ Omeprazole * Inhibits ATP-dependent proton pump in stomach * Treats acid reflux 4. **Antidepressants** * Target neurotransmitter re-uptake mechanisms in brain * Na-driven co-transport enzymes
27
Facilitated Diffusion
**Solute carried through the membrane by a specific carrier protein via a series of conformational changes.** Rocking banana or alternating access model. **Rate of diffusion approaches a maximum rate:** 1. Time it takes carrier to undergo conformational change 2. Finite number of transporter molecules **Exhibits three important properties:** 1. Stereospecificity 2. Saturation 3. Competition
28
GLUT1
* Found in **RBC and vascular epithelium** * Including **BBB** * Transports: * **D-glucose** ⇒ Km = 1.5 mM * **D-mannose** * **D-galactose** * Can discriminate between D-glucose and L-glucose * Deficiencies linked to seizures
29
GLUT4
**Insulin-regulated** glucose transporter found in **adipose and skeletal muscle**.
30
GLUT5
**Fructose** transporter found in the **small intestine**. Deficiencies linked to dietary fructose intolerance.
31
Ion Channels
**Hydrophilic transmembrane pores.** Provides water-like environment for ion diffusion. **Does not require a conformational change** ⇒ extremely rapid ⇒ approaches diffusion rate in water
32
Primary Active Transport
**ATP hydrolysis is directly coupled to solute transport.** _Transporters divided into 3 categories:_ 1. **P-type transporters** 2. **F and V type proton pumps** 3. **ABC transporters**
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Post-Albers Cycle
Representative of all transporters that use ATP **E1 and E2 conformations:** Selectively binds a different ion Promotes its translocation across the membrane
34
P-Type Transporters
High degree of similarity between transporters. All have a **phosphorylated intermediate** in the **Post-Albers Cycle**. 1. Na+/K+-ATPase (Na+ pump) 2. Ca2+-ATPase (Ca2+ pump or SERCA) 3. H+/K+-ATPase (Proton pump)
35
Na+/K+-ATPase (Na+ pump) Characteristics
**For every ATP→ADP ⇒ 3 Na+ out and 2 K+ in** * Found in virtually every cell * Accounts for ~33% of BMR * **Electrogenic** * More positive charges moved out than in * **Adds** **-5 mV to membrane potential** * **Maintains ionic hemostasis** * **Maintains osmotic balance** * Inhibited by cardiac glycosides * Digoxin and Digitoxin * Inotropic agents used to treat CHF
36
Na+/K+-ATPase Role in Osmotic Balance
Important in maintaining osmotic balance: * Many **fixed anions confined to cytosol** * **Cations** required for **charge balance** brought in by pump * **Cations creates osmotic gradient** * **Pulls water into cell** * Inorganic ions counteract these forces * Na+ pump drives Na+ out of the cell * **Cl- is kept out by the membrane potential**
37
Ca2+-ATPase | (Ca2+ pump or SERCA)
For each ATP→ADP ⇒ 1 to 2 Ca2+ ions transported * Maintains low intracellular [Ca2+] * One located on plasma membrane * Removes Ca2+ from cytosol * One moves Ca2+ into organelles * ER * Sarcoplasmic reticulum of muscle cells * terminates muscle contraction
38
H+/K+-ATPase | (Proton pump)
**Moves H+against electrochemical gradient using ATP.** * Location: * parietal cells of gastric glands in **stomach** * intercalated cells of late distal tubule and cortical collecting duct of **kidney** * Inhibited by Omeprazole
39
F- and V-Type Transporters Mechanism
Follows Post-Albers Cycle mechanism. E1 and E2 No phosphorylated intermediate.
40
F-Type Pumps
Found in **mitochondria and chloroplasts**. Run "backwards" **Synthesizes ATP in oxidative phosphorylation and photophosphorylation** Uses movement of H+ down its concentration gradient
41
V-Type Pumps
Found in intracellular organelles such as lysosomes. **Pump proteins into organelles to acidify intraorganelle environment.**
42
ATP-Binding Cassette (ABC) Transports
* Large family of ATPases * All contain a highly conserved ATP binding cassette * Clinically important * Includes: * MDR transporter * CFTR * ABCA1 cholesterol transporter
43
Multidrug Resistance (MDR) Transporter
* Class of ABC transporter * **Responsible for extrusion of cationic hydrophobic metabolites and drugs** * Expression ↑ by exposure to substrate
44
Cystic Fibrosis Transmembrane Regulator | (CFTR)
* Class of ABC transporter * **Responsible for Cl- secretion by some epithelial cells** * pulmonary tree * pancreas * sweat glands * Deficiencies causes cystic fibrosis
45
ABCA1 Cholesterol Transporter aka Cholesterol efflux regulatory protein (CERP)
* **Moves cholesterol and phospholipids to lipid-poor lipoproteins** * Major role in lipid homeostasis * Defects cause Tangier disease * see ↓ [HDL]
46
Secondary Active Transport
The movement of one solute is couple to the movement of another solute whose concentration gradient was establised via primary active transport. * Na+ almost always involved * Due to Na+ gradient set up by Na+/K+-ATPase * Cotransport or countertransport
47
Cotransport
**Solutes are transported in the same direction.** Important in absorbing epithelia of kidney and small intestine. Includes: 1. Na+/glucose cotransporter (SGLT1) 2. Na+/amino acid cotransporter 3. Na+/K+/2Cl- cotransporter
48
Na+/glucose Cotransporter | (SGLT1)
* Located in **luminal membrane of small intestine** * Two binding sites on exterior side of transporter * One for Na+ * One for glucose * Stoichiometry of transport * 2 Na+/glucose ⇒ SGLT1 and SGLT3 * 1 Na+/glucose ⇒ SGLT2
49
Na+/K+/2Cl- Cotransporter
* Found in a wide variety of cells * Thick ascending limb of the loop of Henle * Important in urine formation * Inhibited by Furosemide
50
Countertransport
Secondary transport where coupled solutes move in opposite directions. _Examples:_ 1. Na+/Ca2+ exchanger 2. Na+/H+ exchanger 3. Cl-/HCO3- exchanger 4. Mitochondrial ADP/ATP exchanger
51
Na+/Ca2+ exchanger
**Na+Outside ↔︎ Ca2+inside** * Helps maintain low intracellular [Ca2+] * Stoichiometry varies amoung cells types * **Usually 3 Na+ in ↔︎ 1 Ca2+out** * **Electrogenic** * Important in cardiac muscle
52
Na+/H+ exchanger
**Movement of 1 Na+ in coupled to movement of 1 H+ out.** * Found in virtually every cell type * Important role in: * regulation of intracelluar pH * cell volume * cell division
53
Cl-/HCO3- exchanger
**Couples countertransport of Cl-and HCO3-.** **AE1** important for transporting HCO3- into RBC in the lung and out of the RBC in the periphery.
54
Mitochondrial ADP/ATP exchanger
ATPmitochondrial matrix ↔︎ ADPintermembrane space Allows oxidative phosphorylation to continue. Delivers ATP to cytoplasm for use by cells.
55
Osmosis
The new flow of water through a membrane. All membranes are at least somewhat water soluble. Concentration gradient expressed in terms of differences in solute concentration.
56
Osmotic Pressure | (∆π)
The amount of pressure needed to prevent the movement of water from an area of high concentration to low concentration. Driving force for osmosis.
57
Cellular Osmotic Pressure
The osmotic pressure of a solution in a cell is dependent on 2 factors: 1. Osmolarity of the solutes 2. Ease with which a solute traverses the membrane ⇒ reflection coefficient
58
Osmolarity
**The concentration of osmotically-active particles.** **Colligative property** ⇒ dependent on the total # of particles in a given amount of solution but not the nature of the solute
59
Reflection Coefficient | (σ)
**Describes the ease with which a solute can cross a membrane.** **σ = 0** ⇒ freely permeable ⇒ exhibits no osmotic pressure **σ = 1** ⇒ impermeable ⇒ provides osmotic pressure σ = 0.02 for urea σ = 1 for albumin and intracellular proteins
60
van't Hoff Equation
Defines the osmotic pressure of a solution:
61
Tonicity
*Biological property* of a solution **defined in terms of water movement across a membrane**. Dependent on the concentration of **impermeant solutes**. **For impermeant solutes, tonicity and osmolarity are the same.** **Tonicity (mOsm/L) = σgC**
62
Aquaporins
Specific channels involved in water transport. * + 13 different aquaporins * different tissue distributions * different regluation * varying ability to transport small neutral molecules other than water * AQP1 ⇒ water only * APQ3 ⇒ water and glycerol * Tetramer of subunits each with hourglass-shaped pore
63
Renal Aquaporins
Distribution of AQP in the kidney tubule correlates with renal function. * Proximal tubule & descending thin limb of LoH * Have AQP present * Water moves freely * Iso-osmotic tubular fluid * Ascending thin limb & thick ascending limb of LoH * Do not have AQP * Water remains * Hypo-osmotic tubule fluid * Collecting ducts & distal tubules * Regulated by ADH * ⊕ ADH ⇒ ↑ [AQP2] ⇒ water moves out ⇒ concentrated urine * ⊖ ADH ⇒ ↓ [AQP2] ⇒ water stays in ⇒ dilute urine
64
Membrane Potential | (Vm)
**Voltage difference between the inside and outside of the cell** Outside of the cell is defined as V=0 **Counterbalances the diffusional driving force set up by the concentration gradient.**
65
Requirements for a Membrane Potential
1. concentration gradient 2. selective membrane permeability
66
Nernst Equilibrium Potential | (Ex)
67
Nernst Potential Physiological Equation
68
Ionic Driving Force
**Net driving force** proportional to the _difference between membrane potential and ion's equilibrium potential_. **Vm - Ex** When net driving force ≠ 0 ⇒ net flux occurs. Direction given by sign of (Vm - Ex) Vm can typically be manipulated by applying external voltage across the membrane ⇒ creates driving force for ion.
69
Goldman-Hodgkin-Katz (GHK) Equation
70
Leak Pathways
Non-gated ion "channels" selective for particular ions Always in an open state Ex. Two pore K+ channel ⇒ K2P
71
Na/K-ATPase Membrane Potential
3 Na+ out ↔︎ 2 K+ in Net movement of one ⊕ charge out Contributes ~ -5 mV to Vm
72
Cl- Balance
Passively distributes itself across the membrane in response to Vm **ECl = Vm** Relative ⊖ charge inside the cell inhibits Cl- movement into cytosol
73
Action Potential Mechanism
Membrane depolarized to threshold ⇒ action potential. 1. **Depolarization phase** * Na+ channels open rapidly * Membrane is Na+ selective * Vm ≈ ENa * K+ channels have not opened yet 2. **Repolarizaton phase** * K+ channels open * Na+ channels inactivated * Vm approaches EK 3. **Hyperpolarization phase** * K+ channels still open * Na+ channels closed and inactivated * Vm equals EK 4. **Return to resting state** * Both K+ and Na+ channels have reset * Only K+ leak channels open * Vm approximately equal to EK
74
Action Potential Membrane Permeability Cycle
75
Absolute Refractory Period
Time during which an action potential cannot be elicited regardless of the stimulus. Due to fact that Na+ permeability has inactivated.
76
Relative Refactory Period
Time during which a larger-than-normal stimulus is required to elicit a propagated action potential. Due to fact that K+ permeability is still elevated.
77
Effective Refractory Period
**Between the absolute and relative fractory periods.** Time where one cannot elicit a propagated action potential regardless of the stimulus. Important in cardiovascular physiology where wave of AP spreads through the heart.
78
Endocrine Signaling
Hormones released into circulation by endocrine cells and travel to targe cells far from site of release.
79
Paracrine Signalling
Signalling molecule interacts with receptors on a neighboring cell. Ex. neurotransmission
80
Autocrine Signaling
Cells respond to a molecule they produced. Ex. T lymphocytes produce IL-2 to stimulate their own proliferation.
81
Intracellular Receptors
* Signaling molecule lipid-soluble and crosses the membrane * Binds to receptors inside the cell * Receptors bind to specific DNA sequences and control gene expression * Two categories: * Bind receptor in the cytoplasm * Bind receptor in the nucleus
82
Cytoplasmic Receptors
* **Receptors bind their ligand in the cytoplasm** * Hormone-receptor complex translocates to the nucleus * Binds via **Zn-finger motifs** to **hormone response elements (HREs)** * Activate or inactivate transcription * Examples: * Glucocorticoid receptors * Mineralocorticoid receptors * Progesterone receptors * Androgen receptors
83
Intranuclear Receptors
* Receptors always found in the nucleus * No translocation of the receptor into the nucleus is needed * Ligand must enter nucleus to bind * Ligand/receptor complex binds to HRE's * Alters transcription * Examples * Thyroid hormone receptor * Retinoic acid receptor * Vit D3 receptor
84
Cell Surface Receptors
**Transmembrane proteins** that undergo a **conformation change** upon ligand binding. **Elicits a change in transmembrane potential or generation of an intracellular second messenger.** Can be divided into several classes: * **Ligand-gated ion channels** * Nicotinic acetylcholine receptor * **Enzyme-linked receptors** * receptor tyrosine kinases * **Cytokine receptors** * **G-protein coupled receptors** * β-adrenergic receptor
85
Ligand-Gated Ion Channels
* Liganding binds forms a selective pore in the membrane * Alters transmembrane potential * Excitatory receptors ⇒ depolarization * Inhibitory receptors ⇒ hyperpolarization * Very fast signaling
86
Enzyme-linked Receptors
* **Receptors have intrinsic enzymatic activity** * Protein kinases * Phosphatases * Proteases * Nucleotide phosphodiesterases * **Ligands are** **polypeptide growth factors and hormones** * **Takes longer ⇒** minutes to hours * **Receptor tyrosine kinases (RTK)** are a major subclass * Insulin receptor * Epidermal growth factor receptor (EGFR) * Platelet-derived growth factor receptor (PDGFR)
87
Receptor Tyrosine Kinases | (RTK)
* After activation, receptor itself is **autophosphorylated** on tyrosine residues on intracellular portion. * Phosphorylated tyrosine act as **recognition sites for intracellular signaling proteins.** * Those proteins are **phosphorylated by the kinase.** * Phosphorylation of substrates allows them to **act as downstream effectors.**
88
Insulin Receptor Signaling
1. Insulin binds extracellular α-subunits of insulin receptor 2. Autophosphorylation of intracellular β-subunits 3. Facilitates binding of **insulin receptor substrates (IRS)** 4. IRS phosphorylated ⇒ serves as docking protein for downstream effectors 5. Two major pathways activated * **Phosphatidylinositol-3-kinase (PI3K)** * Converts PIP2 ⇒ PIP3 * Major changes in glucose and protein metabolism * **Ras pathway** * Increases gene expression
89
Cytokine Receptors
* **Cytokines ⇒ polypeptides that regulate growth and differentiation** * Interleukins * Interferons * Receptors do not have intrinsic enzyme activity * **Ligand binding ⇒ conformational change ⇒ activation of proteins kinases** * direct interaction with kinase * via adapter proteins that form kinase complexes
90
G-Protein Coupled Receptors | (GPCRs)
* **Receptors have 7 transmembrane alpha-helices** * Important role in many physiological processes * taste and vision * cardiac contractility * metabolism * BP control * **Transduction of signal via heterotrimeric GTP-binding proteins (G proteins)** * G proteins interact with **downstream effector proteins** * Phospholipases * Adenylyl cyclase * Ion channels * Systems then generate **secondary messengers**
91
G-proteins Overview
**GTP-binding proteins with intrinsic GTPase activity.** * Heterotrimeric with α, β, and γ subunits * Variable α subunit * Classified based on α subunit which determines effects * Common βγ subunits * Have GDP bound to them at rest
92
G Proteins Mechanism
1. Ligand binds 2. GPCR interacts with G-protein/ADP 3. GDP switched for GTP 4. G-protein dissociates into α/GTP complex and βγ complex 5. α/GTP complex and βγ complex interact with effectors proteins 6. ∆ secondary messenger levels 7. GTPase activity of α subunit acts as a timer for the transduction event * Once GTP hydrolyzed to GDP, heterotrimer complex reassembles and generation of 2nd messenger stops
93
GS Proteins
Stimulates adenylyl cyclase. Examples: β-adrenergic receptors Glucagon receptors TSH receptors
94
GI Proteins
Inhibits adenylyl cyclase. Examples: α2 adrenergic receptors M2 muscarinic receptors
95
Gs or GI Pathways
Gs stimulates and GI inhibits adenylyl cyclase. **Adenylyl cyclase ⇒ cAMP** cAMP binds regulatory subunits of protein kinase A (PKA) Dissociation of PKA complex ⇒ **activation of PKA** **PKA phosphorylates serine or threonine residues** **Alters activity of the substrate.** cAMP degraded by **phosphodiesterases**.
96
Hepatic Glycogen Catabolism Control
Epinephrine ↔︎ β-adrenergic receptors Glucagon ↔︎ glucagon receptors Both are GS receptors. ⊕ adenylyl cyclase ⇒ ↑ [cAMP] ⇒ ⊕ PKA PKA activates glycogen phosphorylase and inhibits glycogen synthase. Results in increased glycogenolysis.
97
GQ Protein
**Activates phospholipase C.** **Works via IP3/DAG system.** Examples: α1 adrenergic receptors M1 muscarinic receptors Angiotensin II type 1 receptors
98
IP3/DAG System
1. Ligand binds GPCR and resulting in GQ activation 2. **GQ stimulates phospholipase C** 3. PLC hydrolyzes **PIP2 → IP3 and DAG** 4. **IP3 triggers release of calcium** from ER by opening IP3 gated channels * ↑ [Ca2+] triggers downstream events * Mediated by **calmodulin** 5. **DAG activates protein kinase C (PKC)** by exposing ATP-binding site * Some isoforms of PKC further stimulated by Ca2+ * **PKC alters activity of downstream effectors** * transcription factors * ion channels * MAP kinase