Exam 2: Genetic Regulation by Chromatin Structure Flashcards

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1
Q

all eukaryotes have their DNA packed by…

A

protein in chromosomes made of chromatin

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2
Q

fundamental unit of chromatin

A

nucleosome with its histone octamer core

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3
Q

2 functions of histone octamers

A

DNA packaging

gene regulation

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4
Q

histones are as important in gene regulation as…

A

transcription factors

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5
Q

do histones and TFs interact?

A

yes

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6
Q

how does DNA packing control gene expression?

A

genes can’t be expressed when they are wound tightly

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7
Q

2 ways histones help control chromatin structure

A

histone type switching

histone tail modification

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8
Q

protein tails are where…

A

modification occurs

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9
Q

HFD

A

histone fold domain where histones bind to each other

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10
Q

histone type switching

A

some histones have special alternative versions (varients)

switching to a different type of histone can have a big effect on the chromatin

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11
Q

macro-H2A

A

completely represses transcription

shuts down genes that make a stem cell able to differentiate

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12
Q

where is macro H2A found

A

heterochromatin near the centromere

inactivated x-chromosomes (barr body histone varient)

genes required for reprogramming cells

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13
Q

what happens if macro-H2A is removed from the genes that make a stem cell able to differentiate?

A

the cell becomes an induced stem cell

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14
Q

special feature of histone modification

A

have loose tails (n-terminal ends) that hang out of nucleosome

programmable by histone modification

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15
Q

modifications occur most often on the aa…

A

lysine, which is common in histone tails

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16
Q

how do acetyl groups modify?

A

loosen chromatin, promoting transcription

17
Q

how to methyl groups modify?

A

condense chromatin, shutting it down

18
Q

what other molecular attachments affect histones?

A

phosphorylation

sumolyation

ubiquitylation

19
Q

do enzymes make changes in histone modifications?

A

yes

effects may be triggered at one location and then spread from that point along DNA

20
Q

general idea

A

transcription can be promoted by loose chromatin or inhibited by tight chromatin