Enzymes Flashcards

1
Q

Enzyme activity

A

amount of substrate turned inot product

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2
Q

specific activity

A

the activity of an enzyme per milligram of total protein

the amount of substrate converted, per mg protein in the enzyme preparation, per unit of time

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3
Q

turnover nummber

A

substrate molecules converted to product in a given unit

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4
Q

catalytic constant

A

moles product per second/moles active site

The number of molecules of substrate converted to product per unit time, when the enzyme is working at maximum efficiency.

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5
Q

km

A

substrate concentration at a velocity where vmax/2 at particular ezyme concentration

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6
Q

competetive inhibition

A

compete with substrate for active site, vmax is same, km increases

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7
Q

non-competetive

A

inhibitor binds to another site than avtive site and reduces enzyme avtivity.
Km is same, vmax decreases

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8
Q

un-competetive

A

Inhibitor binds only to the complex formed between the enzyme and the substrate.
Km and vmax decreases

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9
Q

Effect of enzymes

  1. Activation energy:
  2. gibbs free energy
  3. reaction mechanism
  4. equilibrium state
  5. time to reach equilibrium
A
  1. Decreases
  2. No change
  3. changes
  4. No change
  5. decreases
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10
Q

Types of enzymes

A
Oxidoreductases
ligases
lyases
isomearses
transferases
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11
Q

Acid/base catalysis

A

A.a side chains contribute in catalysis by acting as acid/base

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12
Q

Specific acid/base catalysis

A

Only dependent of H+ and OH, independent of concentration of acids/bases

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13
Q

Proteases

A

Enzyme that cuts proteins by hyrdolzing peptide bonds

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14
Q

Serine-protease

A

Cuts protein by hydrolyzing peptide bonds using serine in the active site of the enzyme

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15
Q

Inbibitor of ser protease

A

di-isopropyl-fluro-phosphate

irreversible inhibitor

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16
Q

Zygmoens/proenzyme

A

Inactive enzyme, can be activated by hydrolysis

17
Q

enzyme induction

A

Process in which molecule induces expression of enzyme

18
Q

specificity of serine protases

A

They are charachterized by distinct structure

where they can be substare specified as trypsin like, chymotrypisn, elastase like

19
Q

Irreversible covalent modification

A

conversion of inavtive proenzyme to active enzyme by hydrolyzing peptide bonds

20
Q

Reversible covalent modification

A

Phosphorylation/ dephosphosphorylation on the enzyme

21
Q

enzyme repression

A

Reprseeor molecule that prevent production of enzyme.

22
Q

Protein kinase

A

enzymes modifying enzymes by adding a phosphate group

23
Q

Hill coeficcient

A

measuring the cooperativity between subunits

24
Q

Prosthetic group

A

Small molecule participating in substrate binding and catalysis
Ex. FAD, bind by covalent, non-covalent

25
Q

Cofactor

A

Small molecule participating in substrate binding and catalysis
Bind in a dissociable manner

26
Q

Coenzymes

A

Small molecule participating in substrate binding and catalysis
Ex: Nadh, transports substrates from one place to another

27
Q

Sirtuin

A

NAD-dependent deacetylases of histones

Play role in silencing, supression of genes near telomeres.

28
Q

Catalysis Constant

A

Catalytic efficiency of enzymes, increasing the rate of reactions which results in a more efficient chemical reaction within a biological systems.

29
Q

Line - weaver burke plo

A

is a graphical representation of the of enzyme kinetics where the y axis is 1/V and the x axis is 1/s. The y axis intercept is 1/vmax and the x axis is -1/Km. Slope is Km/Vmax. It demonstrates the inhibition type on an enzyme.

30
Q

In active site of chymptrypsin, trypsin, elastase

A

chymotrypisn: Phe, Tyr, Trp
trypsin: Arg,Lys
elastase: Gly,Ala, Ser

31
Q

specific constant

A

kcat/ km