enzymes Flashcards

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1
Q

what are metabolic reactions

A

Metabolic reactions encompass both anabolic and catabolic reactions, which are two distinct types of biochemical processes within metabolism:

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2
Q

what are anabolic reactions

A

Reactions in which large molecules are built up from smaller molecules are called anabolic reactions.

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3
Q

what are catabolic reactions

A

Reactions that *split large molecules** into smaller ones are called catabolic reactions.

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3
Q

enzyme definition

A

Enzymes can be defined as biological catalysts. Most enzymes are proteins.

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4
Q

what is a catalyst

A

A catalyst is a substance which speeds up a chemical reaction but remains unchanged itself at the end of the reaction.

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5
Q

what do enzymes do

A

Thus, enzymes increase the rates of chemical reactions without themselves being chemically changed at the end of the reaction.

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6
Q

so how do enzymes increase rates of chemical reactions

A

They speed up a chemical reaction by lowering the activation energy barrier required to start a reaction.

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7
Q

Anabolic reactions on amino acids in a cell

A

**Amino acids* taken into the cells may be used to build up proteins.

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8
Q

anabolic reactions on glucose molecules in a plant cell

A

In plant cells, glucose molecules are joined together to form cellulose to be added to the cell wall.

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9
Q

Catabolic reactions in digestion

A

Inside the alimentary canal, large, water-insoluble molecules are hydrolysed (broken down) to smaller ones in the process of digestion.

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10
Q

how does starch digest
enzyme + product

A

Starch is digested to sugar by an enzyme called amylase.

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11
Q

how does protein digest
enzyme + product

A

Protein is digested to amino acids by protease.

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11
Q

how does fats digest
enzyme + product

A

Fats are digested to fatty acids and glycerol by lipase.

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12
Q

what can pass through the wall of the small intestine and into the blood without an enzyme

A

The simpler, smaller substances are soluble in water and they can pass through the wall of the small intestine and into the blood.

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12
Q

during cellulose respiration what happens to glucose

A

Glucose is oxidised to release energy in the form of ATP molecules, forming carbon dioxide and water.

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13
Q

what is hydrogen peroxide

A

Sometimes during chemical reactions in the cells, hydrogen peroxide, a toxic substance, is produced

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14
Q

how does the body deal with hydrogen peroxide since its toxic

A

The cells produce an enzyme called catalase which catalyses the breakdown of hydrogen peroxide to water and oxygen. This enzyme is abundant in liver cells and potato cells.

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14
Q

can enzymes act on other substrates

A

Enzymes are highly specific in their action, e.g. amylase will only act on starch, and not on proteins or fats.

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15
Q

what are substrates

A

The substances on which the enzymes act are called substrates, e.g. starch, proteins, fats.

16
Q

what is the active site

A

Only a restricted region of the enzyme molecule actually binds to the substrate. This region is called the active site. The active site is usually formed by only a few of the enzyme’s amino acids.

17
Q

what is the lock and key hypothesis

A

The ‘lock and key’ hypothesis states that there is an exact fit between substrate (‘key’) and enzyme active site (‘lock’).

18
Q

y is an enzyme so specific

A

The specificity of an enzyme is due to its very precise three-dimensional conformation that allows a complementary fit between the substrate and the active site.

19
Q

what is the induced fit hypothesis

A

According to the ‘induced fit’ hypothesis, when a substrate molecule fits into an enzyme molecule, the active site alters its shape slightly so that it fits more tightly around the substrate molecule to facilitate the chemical reaction.

20
Q

how are enzyme-substrate complexes formed

A

Binding of substrate molecule(s) at the active site of the enzyme molecule as the three- dimensional conformation of the enzyme active site is complementary to that of the substrate(s)

21
Q

after binding into ES complexes

A

(iii) Chemical reactions that convert the substrate molecule(s) into product molecule(s)
(iv) Separation of product molecule(s) from the active site
(v) Free, unchanged enzyme molecule combines with more substrate molecules

22
Q

CHARACTERISTICS OF ENZYMES

A
  1. Most enzymes are proteins in nature.
  2. Enzymes are unchanged at the end of the chemical reaction.
  3. Enzymes can be used over and over again, thus they are required in small amounts.
  4. Enzymes are specific in their action.
  5. Enzymes are sensitive to changes in temperature and pH. Each enzyme has an optimum
    temperature and pH
    at which they work most efficiently.
  6. Enzymes may require cofactors to be bound to them before they can catalyse reactions.
  7. The action of enzyme can be inhibited by chemical inhibitors that bind to them.
  8. Most enzymes can catalyse reversible reactions. A + B <-> C + D
  9. An extracellular enzyme is an enzyme that is secreted by a cell and functions outside the cell. An intracellular enzyme is an enzyme that functions within the cell in which it was produced.
23
Q

how can the rate of reaction be measured

A

(i) the amount of product(s) formed per unit time; or
(ii) the amount of substrate(s) that disappeared per unit time.

24
Q

what happens to enzymes at low temperatures

A

they inactivate

25
Q

what happens to enzymes when the temperature increases

A

As the temperature increases, its activity increases. The rate of reaction also increases. This is because there is an increase in kinetic energy of enzyme and substrate molecules. As they move about more rapidly, the frequency of effective collisions between substrate molecules and the enzyme’s active site increases. The rate of enzyme-substrate complex formation increases.

26
Q

how much more active does the enzyme get as the temperature increases

A

The enzyme is about twice as active for every 10C rise in temperature until the optimum temperature is reached.

27
Q

What is the optimum temperature mean for enzymes and most common temp

A

The optimum temperature is the temperature at which the rate of reaction occurs fastest or at which enzyme activity is the greatest. For most enzymes, this is about 40 - 45C.

28
Q

what happens to enzymes at high temperatures

A

High temperature (thermal agitation) disrupts the non-covalent bonds that stabilise the three-dimensional conformation of the enzyme molecule. The specific three-dimensional conformation of the enzyme active site is altered and the active site is no longer complementary to the shape of substrate. No enzyme-substrate complex is formed. This is called enzyme denaturation.

29
Q

how does small changes in pH affect enzymes

A

Although small changes in pH affect the activity of enzymes, these effects are usually reversible, that is, an enzyme which is inactivated by a low pH will resume its normal activity when its optimum pH is restored.

30
Q

how does extreme changes in pH affect enzymes

A

Extreme changes in pH may denature some enzymes irreversibly by changing the three-dimensional conformation of the enzyme molecule and altering the shape of the active site.

31
Q

what is a limiting factor

A

A limiting factor is any factor that is in the shortest supply so it directly affects the rate of reaction. The value of this factor has to be increased in order to increase the rate of reaction.

31
Q

As enzyme concentration increases, the rate of reaction increases up to a point when any further addition of enzyme has no effect on the rate. This is represented by the plateau part of the graph, corresponding to the maximum rate of reaction. y is this so

A

There are not enough substrate molecules to occupy all the enzyme active sites at any given moment. At high enzyme concentration, substrate concentration becomes limiting.

32
Q

state and explain which is the limiting factor at low enzyme concentration

A

enzyme concentration is limiting. insufficient enzyme active sites to bind with all the substrate molecules at any given moment.

33
Q

state and explain which is the limiting factor at high enzyme concentration

A

substrate concentration is limiting. Insufficient substrate molecules to occupy all the available enzyme active sites at any given moment.

34
Q

state and explain which is the limiting factor at low substrate concentration

A

substrate concentration is limiting. insufficient substrate molecules to bind with all the enzyme active sites at any given moment.

35
Q

state and explain which is the limiting factor at high substrate concentration

A

enzyme concentration is limiting. insufficient enzyme active sites to bind with all the substrate molecules at any given moment.

36
Q

what are irreversible inhibitors

A

irreversible inhibitors bind tightly and permanantly to enzymes and destroy their catalytic properties. these effects occur at very low concentrations of inhibitor.

37
Q

what are reversible inhibitors

A

reversible inhibitors bind less tightly to an enzyme. they can be classified as competitive or non competitve inhibitors.

38
Q

Techniques for immobilisation:

A

1 Chemical (covalent) attachment of enzyme to a solid support (cellulose fibres).
2 Entrapment of enzyme in beads of jelly-like substance sodium alginate. The pores are large enough to let the substrate in, but not the enzyme out.
3 Adsorption of enzyme to various surfaces but attachment is not permanent.

39
Q

advantages pf immobilised enzymes

A

1 The enzymes are easy to recover, so that they can be used over and over again.
2 Prevents losses due to flushing away of enzymes.
3 The product does not contain enzymes, so it does not need expensive purification.
4 The immobilisation of the enzyme often makes them more resistant to temperature and pH changes.

40
Q

Disadvantages of using immobilised enzymes:

A

1 Losses of enzyme activity can occur during the preparation of beads.
2 Diffusion of substrates and products may be hampered, so rate of catalysis may be lowered.
3 The enzyme may have a more constrained conformation in the immobilised state, giving it a lower catalytic activity.
4 There may be a high initial investment for immobilisation, compared to free enzyme.