Enzyme Classification and Nomenclature Flashcards
Responsible for naming and classifying enzyme
Enzyme commission of IUB (International Union of Biochemistry)
Defines the substrate acted on the reaction catalyze and possibly coenzyme involved (long name and complete)
Systematic name
Usable name or trivial name
Recommended Name
Composed of 4 digits
EC (Enzyme Commission) Numerical code
Represent the enzyme class
First digit
Represent enzyme subclass
Second digit
Represent the enzyme sub-sub class
Third digit
Enzyme serial number specific to the enzyme sub-sub class
Fourth digit
Long name of Acid phosphatase
Orthophosporic monoester phosphohydrolase (acid optimum)
E.C code for Acid phosphatase
E.C.3.1.3.2
Long name for Amylase
1-4-D-Glucan-Glucanohydrolase
E.C code for amylase
E.C.3.2.1.1
Long name for Alanine Amino transferase
L-alanine:2 Oxaglutarate aminotransferase
E.C code for Alanine Amino transferase
E.C.2.6.1.2
- Catalyze redox reaction between two substrates
- Utilize coenzymes and a part of oxidoreductase activity (NAD and NADP)
Oxidoreductase
The most commonly transferred atom in the
oxidoreductase reaction
Hydrogen Ion
A- +B→A+B-
Oxidoreductase reaction
Example of Oxidoreductase reaction
Dehydrogenase (LDH and G6PD)
Catalyze the transfer of a particular chemical group whether it is phosphate and methyl group other than hydrogen ions between two substrates
Transferases
A–X+B→ A+B-X
Transferase reaction
A and B are substrate
X - chemical group
Examples of transferase
Alanine Aminotransferase (ALT), Aspartate Aminotransferase (AST), gamma- glutamyltransferase (GGT) and Kinase
A specific type of transferase that catalyzes the reaction of a phosphate group from one substrate to another
Kinase (CK)
Enzymes that catalyze the hydrolysis of various chemical bonds
Hydrolases
For hydrolase to function, there is a need for
Water
A-B+H2O→A-OH+B-H
Hydrolase reaction
Example of Hydrolases
Amylase, lipase and phosphatases
Enzymes that catalyze the removal of chemical groups without water or hydrolytic mechanism
Lyases
T/F: In lyases there is no need for hydrolysis
TRUE
The product of lyases retain its
Double bond
cAMP means
cyclic adenosine monophosphate
Ppi means
Intermediate diphosphate
Example of Lyases
Fructose biphosphate aldolase (ALS)
Catalyze interconversion of geometric, optical, and positional isomers
Isomerases
Give the reaction for Isomerase
A→B
Example of Isomerase
Triphosphate isomerase (TPI)
Catalyzes joining of 2 substrate molecules coupled with pyrophosphate bond in ADP
Ligases
Example of Ligase
Glutathione Synthetase (GSH-S)