ELM 2 Ion Channels Flashcards
Q: What is gating in the context of ion channels?
A: Gating is the process by which the opening and closing of ion channels are controlled.
Q: What does voltage-gated mean for ion channels?
A: Voltage-gated refers to ion channels whose opening and closing are controlled by the membrane potential.
Q: What does ligand-gated mean for ion channels?
A: Ligand-gated refers to ion channels whose opening and closing are controlled by the binding of a ligand.
Q: What is the role of the alpha subunit in voltage-gated channels?
A: The alpha subunit is the main pore-forming subunit of voltage-gated channels.
Q: What is a pseudo subunit in voltage-gated Ca/Na channels?
A: A pseudo subunit is a structural component of the alpha subunit in voltage-gated Ca/Na channels, with each alpha subunit containing four pseudo subunits linked into a continuous peptide chain.
Q: What is the selectivity filter in an ion channel?
A: The selectivity filter is the part of the ion channel that determines which ions can pass through.
Q: What is selective permeability in ion channels?
A: Selective permeability is the tendency of ion channels to only allow certain ions to pass through.
Q: What is a voltage sensor in voltage-gated channels?
A: A voltage sensor is a charged structure, typically the fourth transmembrane domain of each subunit, that moves to open the channel’s gate in voltage-gated channels.
Q: How do molecules typically move across membranes?
A: Only lipid-soluble molecules can diffuse straight through, while others use proteins to cross membranes.
Q: What is the difference between carrier proteins and ion channels?
A: Carrier proteins do not form a continuous pathway through the membrane but instead bind the substrate on one side and flip it to the other side, whereas ion channels form a protein tube that allows ions to pass through continuously.
Q: What is the maximum rate of transport for carrier proteins?
A: The maximum rate of transport for carrier proteins is approximately 10,000 substrates per second.
Q: What is the maximum rate of transport for ion channels?
A: The maximum rate of transport for ion channels is approximately 1,000,000 ions per second.
Q: What are the properties common to all ion channels?
A: All ion channels are transmembrane proteins, selectively permeable, their opening is controlled, and they are diverse.
Q: What are some gating methods for ion channels?
A: Ion channels can be gated mechanically, by second messengers, phosphorylation, leak, ligand-binding, voltage changes, G-protein interactions, and temperature changes.
Q: What is the structure of a typical ion channel?
A: A typical ion channel has an extracellular funnel, a selectivity filter near the top with negatively charged residues, a central cavity, and an activation gate.
Q: How do ion channels distinguish between positive and negative charges?
A: Ion channels use rings of charge in the selectivity filter to repel ions of opposite charge types, allowing selective permeability.
Q: What is the basic structural unit of voltage-gated K+ channels?
A: Voltage-gated K+ channels are tetramers composed of four equivalent subunits.
Q: How many transmembrane domains does each subunit of a voltage-gated ion channel have?
A: Each subunit of a voltage-gated ion channel has six transmembrane domains.