DNA and Biotechnology Flashcards
Nucleosides?
contain a five carbon sugar bound to a nitrogenous base
Nucleotides?
nucleosides with one to three phosphate groups added
- DNA- deoxyribose
- RNA- ribose
Purines?
GA
Pyrimidines?
CUT
Chargaff’s rule?
purines and pyrimidines are equal in number in DNA, amount of A=T, G=C
Denatured strands?
DNA pulled apart
Reannealed?
DNA brought back together
DNA is organized into ____ chromosomes in human cells.
46
DNA is wound around _____ which form _____.
histones (H2A, H2B, H3, H4)
nucleosomes
What protein is not part of the histone core and stabilizes nucleosomes?
H1
Heterochromatin?
dense, silent DNA
Euchromatin?
loose, active DNA
Telomeres?
ends of chromosomes, they contain high GC content to prevent unraveling of DNA
Centromeres?
located in the middle of chromosomes and hold sister chromatids together until they are separated during anaphase of mitosis, contain high GC content
What has multiple origins of replication per chromosome?
Eukaryotes
What unwinds the DNA double helix for replication?
helicase
What stabilizes the unwound template strands in replication?
single stranded binding proteins
What synthesizes RNA primers in replication?
Primase
What synthesizes DNA in replication (Prok/Euk)?
Prok- DNA Pol III
Euk- DNA Pol alpha and sigma
What removes RNA primers in replication (Prok/Euk)?
Prok- DNA Pol I (5’ to 3’ exonuclease)
Euk- RNAse H (5’ to 3’ exonuclease)
What replaces RNA with DNA are removing the RNA primers in replication (Prok/Euk)?
Prok- DNA Pol I
Euk- DNA Pol alpha
What joins okazaki fragments?
DNA ligase
What removes the positive supercoils induced by helicase?
DNA Topoisomerase II (DNA Gyrase)
What synthesizes telomeres?
Telomerase (only in Euk)
DNA is synthesized ______ and read ______.
5 to 3
3 to 5
How many primers does the leading strand require? lagging?
only one
many
Recombinant DNA?
DNA composed of nucleotides from two different sources
DNA cloning?
introduce fragment of DNA into a vector plasmid, restriction enzyme (restriction endonucluease) cuts both the plasmid and the fragment leaving them with sticky ends which can bind
Genomic libraries?
contain large fragments of DNA, including both the coding and noncoding (introns) regions of the genome, cannot be used to make recombinant proteins or for gene therapy
cDNA libraries?
contain smaller fragments of DNA, and only include the exons of genes expressed by the sample tissue, can be used to make recombinant proteins and gene therapy
Hybridization?
the joining of complementary base pair sequences
PCR?
is an automated process by which millions of copies of a DNA sequence can be created from a very small sample by hybridization
DNA molecules can be separated by size using _____.
agarose gel electrophoresis
Southern blotting?
used to detect the presence and quantity of various DNA strand in a sample, looking for a sequence of interest, used after electorphoresis
DNA sequencing?
uses dideoxyribonucleotides which terminates the DNA chain b/c they lack a 3’ OH group