DIT VII: Micro Flashcards
Infections associated with birds (5)
Histoplasma capsulatum, Crytococcus neoformans, Chlamydophila psittaci, H5N1 influenza, West Nile virus
Dermatophytes (4)
Trichophytin, Microsporum, Epidermophytin, Malassezia furfur
Opportunistic fungal infections (4)
Candida albicans, Aspergillus, Cryptococcus neoformans, Mucor and Rhizopus spp
What is ringworm
Tinea corporis and capitis, caused by dermatophytes
What is tinea unguium
Onychomycosis, dermatophyte infection of fingernails
found in SW U.S. incl west Texas and California
Coccidioides immitis
Found in Mississippi and Ohio river basins
Histoplama capsulatum
Causes San Joaquin Valley fever
Coccidioides immitis
Found in rural Latin America
Paracoccidioides brasiliensis
Assoc w plant thorns and cutaneous injury
Sporothrix schenckii
Found in states E of Mississippi River
Blastomyces dermatitides
Found in bat and bird droppings
Histoplasma cpasulatum
Mold form contains barrel-shaped arthroconidia
Coccidioides immitis
Assoc w dust storms
Coccidioides immitis
Broad-based budding of yeast
Blastomyces dermatitides (BBB = broad-based buds)
Multiple-budding of yeast form
Paracoccidioides brasiliensis
Causes diaper rash
Candida albicans
Opportunistic mold with septate hyphae that branch at 45 degr. angle
Aspergillus fumigatus (Acute Angles = Aspergillus)
Opportunistic mold with irreg nonseptate hyphae that branch at wide angles (>90 degr)
Mucor & Rhizopus spp.
Causes thrush in immunocompromised pts. and vulvovaginitis in women
Candida albicans
Known for causing pneumonia in AIDS pts
Pneumocystis jirovecii
When to start Bactrim prophylaxis in AIDS pts?
When CD4 count <200 (against Pneumocystis jirovecii pneumonia)
Yeast known for causing meningitis in AIDS patients
Cryptococcus neoformans
Most common opportunistic infection in HIV pts
Pneumocystis jirovecii
Prophylaxis for Cryptococcus in AIDS pts
Fluconazole
Prophylaxis for PCP in AIDS pts
TMP-SMX (trimethoprim sulfa)
Treatment for Sporothrix schenckii
Oral potassium iodide / itraconazole
Treatment for oral candidiasis
Nystatin / fluconazole
Treatment for systemic candidiasis
Amphotericin B
Dx test for systemic candidiasis
Germ tubes in standard blood cultures
Dx test for Cryptococcus neoformans
India ink to stain capsule. Can also use tests for Crypto antigen or latex agglutination test
Dx test for Pneumocystis jirovecii
Silver stain
PCP pneumonia: type and CXR appearance
Diffuse interstitial pneumonia (atypical), ground glass appearance
What is associated with fungus ball in the lungs
Aspergilloma (Aspergillus fumigatus)
Features of infection with Mucor and Rhizopus spp.
Large necrotic lesions (black eschar), cranial nerve involvement
Organism associated with tinea versicolor
Malassezia furfur
Clinical features of tinea versicolor
Hyper/hypopigmented areas on prox limbs and trunk, large macules may coalesce, not usually pruritic
Tx for tinea versicolor
topical azole / selenium sulfide (Selsun blue)
Dx test for tinea versicolor
KOH prep of skin scraping –> spaghetti and meatball appearance
Granulomas: systemic mycoses vs TB
System mycoses = non-caseating granulomas
TB = caseating granulomas
Dx test for systemic mycoses
Sabouraud agar
Histoplasma capsulatum: size, where it resides
smaller than RBCs, Histo Hides in macrophages
Paracoccidioides brasiliensis: size, histological appearance
Much larger than RBC, captain’s wheel formation
Clinical features of Sporothrix schenckii infection
Introduced via trauma to skin, pustule / ulcer at infection site, nodules along lymphatics
MOA of penicillin (3)
- bind to penicillin-binding proteins
- inhibit formation of cross-linkages between peptidoglycans
- upregulate autolysins
Is penicillin bactericidal or bacteriostatic?
bactericidal
Forms of penicillin
Penicillin G = IV
Penicillin V = oral
Uses of penicillin
Gram + (eg strep pneumo, strep pyogenes, Actinomyces, GBS), spirochetes (eg syphilis), Gram + rods (Clostridium, Listeria, bacillus), Gram - cocci (Neisseria)
ADRs of penicillin
H.S. rxns, hemolytic anemia, thrombocytopenia
Penicillinase: what does it do, where is it produced
hydrolyses beta-lactam ring of penicillins, a lot of Gram - organisms produce in periplasm (coded by plasmids)
2 mechanisms of resistance against penicillins
- penicillinase (beta-lactamase)
2. alteration of beta-lactam targets (PBPs)
Penicillinase-resistant penicillins (4)
methicillin, nafcillin, oxacillin, dicloxacillin
Aminopenicillins (2)
ampicillin, amoxicillin
ADRs of aminopenicillins
H.S. rxns, generalized rash when given for mononucleosis
Carboxypenicillins (3)
ticarcillin, carbenicillin, piperacillin
Uses for carboxypenicillins
Pseudomonas, Gram - rods
Beta-lactamase inhibitors (3)
clavulanic acid, sulbactam, tazobactam
Name the group: methicillin, nafcillin, oxacillin, dicloxacillin
penicillinase-resistant penicillins
Name the group: ampicillin, amoxicillin
aminopenicillins
Name the group: ticarcillin, carbenicillin, piperacillin
carboxypenicillins
Clinical uses for ampicillin and amoxicillin
Gram + bacteria
Gram - rods (“HEELPSS”): H. influenzae, E. coli, Listeria, Proteus mirabilis, Salmonella, Shigella
“HEELPSS” organisms: what are they, what can be used against them?
Gram - rods: H. influenzae, E. coli, Listeria, Proteus mirabilis, Salmonella, Shigella
Use amoxicillin or ampicillin
What has greater bioavailability, ampicillin or amoxicillin?
amoxicillin
Penicillin used for syphilis
Penicillin G
Penicillin used for UTI
amoxicillin
Penicillin used for Pseudomonas
ticarcillin, carbenicillin, piperacillin (carboxypenicillins)
Penicillin used for neonatal infections
ampicillin (+ gentamicin)
HACEK organisms: what are they, and what are they known for?
Haemophilus, Actinobacillus, Cardiobacterium, Eikenella, Kingella
- cause culture-negative endocarditis
Bacterial structure: gelatinous, polysaccharide coating, aids in attachment to foreign material
Glycocalyx
Quellung reaction: what does it test for, when will it be positive?
Anti-capsular serum, encapsulated organisms will appear swollen under microscope
Stain for Cryptococcus neoformans
India ink
Prokaryotic ribosomal subunits
50S + 30S = 70S
Eukaryotic ribosomal subunits
60S + 40S = 80S
What is bacterial transduction?
Phage attaches to bacterium, injects DNA
Name the species: cell wall contains mycolic acid, rich in lipids
Mycobacteria
Name the structure: forms attachment between 2 bacteria during conjugation
Pilus
Which organisms do not take Gram stain?
Gram - organisms, Mycobacteria, Mycoplasma, Treponema, Legionella pneumophila
How is Treponema visualized?
Dark field microscopy
Uses for Giemsa stain
Borrelia, Rickettsiae, Chlamydia, Plasmodium, Trypanosomes, Histoplasma
What is Periodic Scid-Schiff stain used to visualize, and what is it used to diagnose?
Stains glycogen and mucoploysaccharides, + in Whipple’s disease (Tropherymena whippelii)
What does Ziehl-Neesen stain used for?
Acid-fast organisms (eg Mycobacterium tuberculosis)
What does India ink stain for?
Cryptococcus neoformans
What does silver stain indicate?
Fungi (Pneumocystis jirovecii), Legionella
Where is endotoxin produced?
In outer membrane of Gram - organisms
What is a superantigen? Name 2 organisms producing superantigens
Exotoxin able to bind MHC II abd TCR simulataneously. Eg S. aureus and Strep pyogenes (Group A)
Hemolytic anemia + thrombocytopenia + acute renal failure
Hemolytic-uremic syndrome (HUS)
What toxin is produced by Corynebacterium diphtheria, and what is its MOA?
Diphtheria toxin: inactivates elongation factor EF-2, inhibiting protein synthesis
Pharyngitis with gray pseudomembranes, cardiac & nerve cell damage
Corynebacterium diphtheriae
What toxin is produced by Pseudomonas aeruginosa, and what is its MOA?
Exotoxin A: targets EF-2
What toxin is produced by Shigella, and what is its MOA?
Shiga toxin: cleaves host RNA at adenine base in 60S ribosomal subunit
What toxin is produced by enterohemorrhagic E. coli (EHEC), what is its serotype, and its effect?
E. coli 0157:H7 produces verocytotoxin (Shiga-like toxin): bloody diarrhea, damage to renal & endothelial cells (HUS)
What toxins are produced by enterotoxigenic E. coli (ETEC), their MOA, and their effect?
Heat labile toxin (increases cAMP) and heat stable toxin (increases cGMP): cause watery diarrhea
What is the #1 cause of traveller’s diarrhea?
Enterotoxigenic E. coli (ETEC)
What toxin is produced by Yersinia entercolitica, its MOA, and its effect?
Heat stable toxin, increases cGMP, causes abdo pain (like appendicitis)
What toxin is produced by Bordetella pertussis, and what is its MOA?
Pertussis toxin: binds and inhibits inhibitory proteins –> increases cAMP
What toxin is produced by Clostridium tetani, its MOA, and its effect?
Tetanospasmin: blocks release of GABA & glycine –> persistent musc contraction, lockjaw, spastic paralysis
What toxin is produced by Clostridium botulinum, its MOA, and its effect?
Exotoxins A-G: inhibit release of ACh, cause flaccid paralysis
What toxins are produced by Clostridium perfringens, and what is their effect?
Alpha toxin (phospholipase): gas gangrene & myonecrosis. Enterotoxin: food poisoning if cooked food left out too long (spores germinate).
What toxin is produced by Bacillus anthracis (including components)?
Anthrax toxin: edema factor (increases cAMP), lethal factor, protective antigen
What toxin is produced by Vibrio cholerae, and what is its MOA?
Choleragen (cholera toxin): stimulate adenylyl cyclase, increases cAMP, Cl- and water go into lumen
Effects of S. aureus alpha-toxin & beta toxin
Alpha: hemolysis. Beta: sphingomyelinase.
Effects of S. aureus proteins A, B, and C of gamma-toxin
A=B = hemolysin. B+C = leukocidin.
Effects of S. aureus hemolysin
Hemolysis
Effects of S. aureus Leukocidin
Destroys leukocytes
Effects of S. aureus enterotoxins A-E
Food poisoning, vomiting, diarrhea
Toxic shock syndrome: organism and toxin responsible, S&S
S. aureus TSST-1: high fever, hypotension, diffuse rash
Scalded skin syndrome: organism and toxin responsble
S. aureus epidermolytic / exfoliative toxins
Toxins secreted by Strep pyogenes (Group A Strep) and their effect
Streptolysin O: hemolysis (Oxygen labile). Streptolysin S: hemolysis (oxygen Stable). Erythrogenic / pyogenic toxins: scarlet fever.
What is the cause of scarlet fever?
Erythrogenic / pyogenic toxins of Strep pyogenes (Group A Strep)
1 blood culture contaminant
S. epidermidis
What does hemolysis test assess, and what are the possible results?
Ability to hemolyse blood agar. Beta hemolysis: complete ability, ring around colony. Alpha hemolysis: partial, green ring around colony. Gamma hemolysis: none.
Name the infection and clinical manifestation: contaminated deli meat, unpasteurized milk & cheese
Listeria, meningitis in very young and very old
Name the bacteria: large golden colonies
S. aureus
Name the bacteria: yellow granules (“sulfur granules”)
Actinomyces israelii
Name the bacteria: blue-green pigment
Pseudomonas aeruginosa
Name the bacteria: red pigment
Serratia marcescens
What kind of infection does Staph saprophyticus cause?
Common cause of UTIs (10-20% of females)
Name the bacteria: indwelling foreign device infections
S. epidermidis
Name the organism: pneumonia with rust coloured sputum
Strep pneumoniae
Name the organism: most prominent organism found in dental plaque, can erode and cause dental caries
Strep mutans (type of viridans Strep)
Name the organism and prophylaxis: enters circulation during dental procedures and causes subacute endocarditis
Strep sanguinis, amoxicillin
Cause of acute pharyngitis
Group A Strep (Strep pyogenes)
Name the organism: acute pharyngitis, cellulitis, bacteremia, pneumonia, necrotizing fasciitis
Group A Strep (Strep pyogenes)
Name the organism: acute post-streptococcal glomerulonephritis, rheumatic fever
Group A Strep (Strep pyogenes)
Name the organism: streptococcal toxic-shock syndrome, necrotizing fasciitis
Group A Strep (Strep pyogenes)
Jones criteria for rheumatic fever
Joints, Pancarditis, subcutaneous Nodules (Aschoff nodules), Erythema marginatum, Sydenham chorea
Aschoff nodules
Rheumatic fever
Minor criteria for rheumatic fever
Arthralgia, fever, raised ESR/CRP, prolonged PR interval
What diseases do Group B strep cause in infants, and what is the prophylaxis?
Pneumonia, sepsis, meningitis. Prophylactic penicillin during labour.
What diseases do Group B strep cause in pregnant women?
Asymptomatic bacteruria, UTI, post-partum endometritis, bacteremia
What diseases do Group B strep cause in nonpregnant adults?
Bacteremia, skin & soft tissue infections
Causes of neonatal sepsis (3)
GBS, E. coli, Listeria monocytogenes
What infections do enterococci cause?
Endocarditis & UTIs (esp in hospital)
Enterobacter vs Enterococcus
Enterobacter = Gram - rod. Enterococcus = Gram + coccus.
What organism causing endocarditis is also associated with colon cancer?
Strep bovis
Causes Q fever
Coxiella burnetii
Spores with “drumstick-like appearance”
Bacillus spp. & Clostridium spp.
Rx for Corynebacterium diphtheriae
Erythromycin/penicillin, vaccine, antitoxin
Large painless ulcer with centra necrosis (depressed black eschar), surrounded by edema
Cutaneous anthrax (Bacillus anthracis)
“Wool sorters’ disease”, mediastinal widening on CXR
Inhalational (pulmonary) anthrax (Bacillus anthracis)
What type of bacteria is Listeria monocytogenes?
Gram + rod, facultative intracellular
General Rx for anaerobes
Metronidazole, clindamycin
What infections can Actinomyces cause?
Cervicofacial disease (usually around mandible): inflammatory changes on skin, develop sinus tracts that drain pus and “sulfur granules”
Most common cause of of osteomyelitis
S. aureus
Pharyngitis resulting in glomerulonephritis
Strep pyogenes
Diarrhea after using antibiotics
C. difficile
Branching, filamentous Gram (+) rods with sulfur granules
Actinomyces israelii
Name the organism: pneumonia (esp in CF), otitis externa, UTIs, osteomyelitis (esp in DM), sepsis, contaminated medical equipment & catheters, burns, hot tub folliculitis
Pseudomonas aeruginosa
Rx for Pseudomonas aeruginosa
Piperacillin & ticarcillin, cefepime, ceftrazidime, imipenem, meropenem, fluoroquinolones
Name the organism: increased risk gastric adenocarcinoma & lymphoma, urease +
Helicobacter pylori
Dx for H. pylori
Urea breath test, stool antigens, serology studies
Rx for H. pylori (triple and quad therapy)
Triple: PPI + clarithromycin + amoxicillin/metronidazole.
Quad: bismuth + PPI + metronidazole + tetracycline
Urethritis, PID, STI, septic arthritis, conjunctivitis in newborns
N. gonorrhoeae
Rx for N. gonorrhoeae (1st and 2nd line)
1st line: ceftriaxone. 2nd line: azithromycin / doxycycline
Name the organism: meningitis, Waterhouse-Friderichsen syndrome, sepsis, DIC
N. meningitidis
Rx for for N. meningitidis (prophylaxis & Tx)
Prophylaxis: rifampin, ciprofloxacin, or ceftriaxone. Tx: ceftriaxone or penicillin G
Epiglottitis, otitis media, sinusitis, pneumonia
H. influenzae
Name the disease and organism: airway compromise, difficulty breathing & swallowing, drooling, “sniffing dog position”, “thumb sign”, esp ages 2-7 years
Epiglottitis, H. influenzae (worst form is Hib)
“Thumb sign” on X-ray
Edema due to epiglottitis
Dx of H. influenzae type B (Hib)
Produces IgA protease, culture on chocolate agar, need factors V & X for growth
Cultured on chocolate agar, needs factors V & X for growth
Hib
Tx and prophylaxis for Hib
Ceftriaxone (Tx), rifampin (prophylaxis)
Cause of chancroid
Haemophilus ducreyi
Cause and symptoms of Pontiac fever
Legionella pneumophila, flu-like symptoms
How to visualize, culture, and Dx Legionella pneumophila
Silver stain, charcoal yeast extract culture, needs iron and cysteine. Dx: antigen in urine
Rx for Legionella pneumophila
Erythromycin, other macrolides
Organism: Life-threatening meningitis + purpura
N. meningitidis
Organism: burn wound infection
Pseudomonas aeruginosa
Organism: septic arthritis in young, sexually active patients
N. gonorrhoeae
Dx of Shigella
Stool culture
Tx of Shigella
Supportive, fluoroquinolones (1st line), TMP-SMX or azithromycin (2nd line)
Organism: infected poultry and eggs, turtles, osteomyelitis in sickle cell, reactive arthritis. When does diarrhea begin?
Salmonella, diarrhea begins 1-3 days after
Tx for Salmonella food poisoning
Supportive for healthy adults, fluoroquinolones (1st line)
Disease and organism: “Rose spots” on abdomen
Typhoid fever (Salmonella typhi)
Bloody diarrhea after poultry/meat/unpasteurized milk, 1-2 weeks, assoc with Guillain-Barre syndrome
Campylobacter jejuni
Tx for Campylobacter jejuni
Fluoroquinolones, azithromycin
Organism and MOA: “Rice water” diarrhea
V. cholerae: heat labile toxin increases cAMP
Tx for V. cholerae
Oral rehydration
Organism & Tx: bloody diarrhea, undercooked pork & milk, household pets, mesenteric adenitis, outbreaks in daycares
Yersinia enterocolitica, supportive Tx
Lobar pneumonia in weakened immune systems, red current jelly sputum, major cause of UTIs
Klebsiella pneumoniae
Toxins produced by C. diff and MOA
Toxin A (enterotoxin): binds to brush border, causing fluid secretion and inflamm. Toxin B (cytotoxin): kills enterocytes.
Organism, risk factors, and histo appearance: pseudomembranous colitis
C. difficile, associated with antibiotic uses (clindamycin, ampicillin). Necrosis with exudates, fibrin, leukocytes, looks like membrane.
Dx of C. diff
C. diff toxin in stool
Tx of C. diff
Metronidazole, vancomycin (oral)
Cause of food poisoning and onset of diarrhea: meats, mayo, custard
S. aureus, 1-2 hours
Cause of food poisoning: reheated rice
Bacillus cereus
Cause of food poisoning: shellfish
Vibrio parahemolyticus & vulnificus
Cause of food poisoning: improperly canned foods
C. botulinum
Cause of food poisoning: reheated meat
C. perfringens
Cause of food poisoning: undercooked hamburger meat
E. coli 0157:H7
MOA and Tx for ETEC diarrhea
Heat-labile (incr cAMP) and heat stable (incr cGMP), no blood. Rx: supportive, cipro/levofloxacin, azithromycin (paeds)
Manifestations and Tx of EHEC diarrhea
Shiga-like toxin, bloddy diarrhea, can lead to HUS. Tx supportive
MOA of enteopathogenic E. coli (EPEC)
Adheres to apical surfaces, flattening villi and decr absorption –> watery diarrhea
MOA and Tx of enteroinvasive E. coli (EIEC)
Invades intestinal wall, leads to necrosis, inflamm, bloody diarrhea, and fever. Tx: fluoroquinolones, TMP-SMX, azithromycin.
Diarrhea transmitted from household pets
Yersinia enterocolitica
Most common cause of traveller’s diarrhea
Enterotoxigenic E. coli (ETEC)
Causes of food poisoning due to exotoxin (2)
S. aureus, B. cereus
What is the leukocyte esterase test used for?
Tests for esterase in urine from WBCs, indicates inflamm in urinary tract, also elevated in gonorrhea
What is the nitrite test used for?
Tests urine for presence of Enterobacteria (common cause of UTIs)
What infection do the following organisms have in common? E. coli, S. saprophyticus, Klebsiella pneumoniae, Proteus, Serratia marcescens, Enterobacter cloacae, Pseudomonas
Cause UTIs
Carry urease, cause stag horn calculi (which are made of what?)
Proteus mirabilis & vulgaris; ammonium + Mg + phosphates stones
UTI Tx for Gram - organisms
Sulfonamides + TMP, aminopenicillin, fluoroquinolones, nitrofurantoin
Name the drug by ADRs: hypersensitivity rxns, hemolysis, nephrotoxicity, kernicterus, displaces other drugs from albumin, Stevens-Johnson syndrome, photosensitivity
Sulfonamides
Drugs with photosensitivity reactions (3)
“SAT”: Sulfonamides, Amiodarone, Tetracyclines
What other drugs should eb avoided in patients with sulfa allergy? (7)
“Sulfa Pills Frequently Cause Terribly Acute Symptoms”: Sulfasalazine, Probenecid, Furosemide (loops), Celecoxic, Thiazides/TMP-SMX, Acetazolamide, Sulfonylureas
MOA of sulfonamides
Folic acid inhibitors, by competitively inhibiting dihydropterate synthetase
MOA of trimethoprim
Inhibits dihydrofolate reductase (in folic acid synth)
What drugs can cause Stevens-Johnson syndrome (SJS)?
Seizure drugs (ethosuxamide, lamotrigine, carbamazepine, phenobarbital, phenytoin), sulfa drugs, penicillins, allopurinol
MOA of fluoroquinolones, general family suffix
-floxacin; inhibits DNA gyrase (topoisomerase II)
ADRS: GI upset, damage to cartilage, tendonitis
Fluoroquinolones
MOA of metronidazole
Forms toxic free radicals, leading to DNA damage
Uses for metronidazole
“GET GAP on the metro!”: Giardia, Entamoeba, Trichomonas, Gardnerella vaginalis, Anaerobes (Clostridium, Bacterioides), H. Pylori
Function of enzyme urease, in which organism is it found?
Splits urea into NH3 and CO2, found in Proteus
Most common bacteria in a patient with struvite kidney stones
Proteus (then Staph)
Cause and transmission of Lyme disease
Borrelia burgdorferi, transmitted by Ixodes tick
Name the disease: fever, headache, fatigue, depression, erythema migrans
Stage 1 Lyme disease (days to 1 month)
Name the disease: bilateral Bell’s palsy, meningitis, peripheral neuropathies, AV nodal block, myopericarditis
Stage 2 Lyme disease (weeks to months)