diagnosis Flashcards
S. pyogenes
pharyngitis diagnosis by throat swab: Strep A antigen test, growth on blood agar
S. pneumoniae
gram stain of sterile tissue, fluid sample, urine antigen test for C-polysaccharide
B. anthracis
gram stain, endospore stain, colony morphology, capsule prescence, chest X-ray, CT scan
B. cereus
isolation of organism from food source using bacara media, gram stain, endospore stain, chemical testing
L. pneumophila
urine antigen test and/or culture of sputum on buffered charcoal yeast extract, GEMSA stain
L. monocytogenes
gram stain of CSF, culture of CSF or blood
M. tuberculosis
culture/microscopy of sputum on Lowenstein-Jensen or Middlebrook 7H11, tuberculin skin test (Mantoux test), Chest X ray, nucleic acid amplification
C. diphtheriae
based on characteristic pseudomembrane, microscopy is NOT effective, can be cultured from samples on blood agar, colitistin nalidixic acid agar
B. pertussis
nasopharyngeal swab onto Bordet-Gengou media or Regan-Lowe media, serotesting
S. aureus
gram stain of pus, selective media culture (MSA), coagulase test
E. coli
growth on selective media, physiological tests, serotyping, nucleic acid testing; UPEC: clean catch urine on BAP (B hemolysis), Mac (lac +)
Shigella spp.
growth on selective media, physiological tests, serotyping, nucleic acid testing
S. enterica spp. enterica
stool (all) or blood (Typhi) plated on MacConkey , suspect colonies on TSI, Gruber-Widal test for antigenic analysis to confirm serotype - Typhi culture must be chosen carefully (blood week 1, stool 2/3)
Y. pestis
clinical suspicion, GEMSA stain of blood, sputum, buboe aspirate (safety pin staining)
C. perfringens
Nagler reaction - one 1 side, patient sample and antitoxin (if C. perf no clearing) one side patient sample (should be opaque zone around streak caused by alpha toxin)