Clinical science Flashcards
Canakinumab MOA?
targets IL-1 beta
- used in systemic JIA, adult onset Still’s
what organs are in direct contact with the left kidney?
- Left suprarenal gland
- Pancreas
- Colon
what organs are in direct contact with the right kidney?
- Right suprarenal gland
- Duodenum
- Colon
p53 gene is located on which chromosome?
17p
role of p53 tumour suppressor?
preventing entry into the S phase until DNA has been checked and repaired.
- key regulator of apoptosis
What is responsible for rapid depolarisation of myocardial cells?
rapid sodium influx
What is responsible for early repolarisation of myocardial cells?
efflux of K+
What is responsible for the plateau before full repolarisation of myocardial cells?
slow influx of calcium
what is responsible for final repolarisation of myocardial cells?
efflux of K+
what is responsible for restoration of ionic concentrations of myocardial cells?
resting potential restored by Na+/K+ ATPase
What part of the heart is responsible for the fastest conduction?
purkinje fibres
- large diameter, velocities of 2-4m/s
IX of homocystinuria?
- Increased homocysteine levels in serum and urine
- cyanide-nitroprusside test: *also + in cystinuria
Mx of homocystinuria?
Pyridoxine Vit B6 supplements
Causes of increased lung compliance?
ie. greater change in lung volume/ unit change in airway pressure
- age
- emphysema - this is due to loss alveolar walls and associated elastic tissue
Causes of decreased lung compliance?
ie. decreased change in lung volume/ unit change in airway pressure
- pulmonary oedema
- pulmonary fibrosis
- pneumonectomy
- kyphosis
Function of leukotrienes?
- mediates inflammation/ allergic reactions
- causes bronchoconstriction, mucous production
- increases vascular permeability, attracts leukocytes
Leukotriene in NSAID induced bronchospasm in asthmatics?
NSAID induced bronchospasm in asthmatics is secondary to the express production of leukotrienes due to the inhibition of prostaglandin synthetase
Which technique would be most suitable to detect and quantify a viral protein?
Western blot
- detects *PROTEINS using gel electrophoresis
Function of Vit D?
- increases plasma calcium + phosphate
- increases renal tubular reabsorption and gut absorption of calcium
- increases osteoclastic activity
- increases renal phosphate reabsorption
Characteristic features of Rubella maternal infection in babies?
S.H.E.
- Sensorineural deafness
- Eyes: Congenital cataracts, Glaucoma
- Congenital heart disease (e.g. patent ductus arteriosus)
Characteristic features of Toxoplasmosis maternal infection in babies?
- Cerebral calcification
- Chorioretinitis
- Hydrocephalus
Characteristic features of CMV maternal infection in babies?
- Growth retardation
- Purpuric skin lesions
Differences between Toxoplasmosis and CMV maternal infection in baby?
Toxo: hydrocephalus
CMV: microcephaly
What cells are mostly responsible for creating granulomas?
macrophages
what cytokine is the main agent in macrophage activation?
IFN-gamma
Which cytokines are responsible for neutrophil chemotaxis?
IL-8, TNF alpha
which cytokines induce fever?
IL-1, IL-6, TNF-alpha
Which cytokine is an anti-inflammatory cytokine?
IL-10
MOA of growth hormone?
- acts on transmembrane R for growth factor
- binding of GH -> receptor dimerization
- acts directly on tissues + indirectly via IGF-1
where is IGF-1 primarily secreted?
liver
what decreases/ inhibits GH secretion?
glucose, somatostatin
What are funnel plots used for?
primarily to demonstrate existence of publication bias in meta-analyses
- treatment effects on horizontal axis, study size on vertical axis
Interpretation of a funnel plot?
a symmetrical inverted funnel shape (ie. triangle) -> suggests publication bias is unlikely.
if asymmetrical: indicates rs between tx effect and study size, indicating either publication bias or a systematic difference between larger and smaller studies
Features of Fabry disease?
- burning pain/paraesthesia in childhood- triggered by stress/heat/cold
- angiokeratomas
- lens opacities
- proteinuria
- early cardiovascular disease
genetics of Fabry disease?
X linked recessive -> deficiency of alpha-galactosidase A
proteinuria + early strokes/ MI + rash known as angiokeratomas?
Fabry disease
Subcortical infarcts and leukoencephalopathy + history of migraines and multiple strokes?
CADASIL
cerebral auto dominant arteriopathy with subcortical infarcts
MELAS =?
mitochondrial encephalopathy with lactic acidosis and stroke symptoms
what are the 5 layers of the epidermis?
- stratum corneum
- stratum lucidum
- stratum granulosum
- stratum spinosum
- stratum germinativum - the basement membrane
which layer of the epidermis gives rise to keratinocytes/ contain melanocytes?
bottom layer- stratum germinativum
which layer of the epidermis is the thickest layer of epidermis?
stratum spinosum
what type of receptors does adrenaline work on?
G-protein coupled receptors
mitochondrial diseases known for…?
poor genotype: phenotype correlation -
within a tissue or cell, there can be different mitochondrial populations (aka heteroplasmy)
Examples of Mitochondrial diseases?
- Leber’s optic atrophy
- MELAS
- MERRF: myoclonus epilepsy with ragged red fibres
- Kearns- Sayre: external ophthalmoplegia, retinitis pigments, ptosis
- sensorineural hearing loss
muscle biopsy classically shows ‘red, ragged fibres’ due to increased number of mitochondria
mitochondrial diseases
most common renal abnormality in Turner’s syndrome
Horseshoe kidney - occur in 10%.
- usually causes higher risk of ureteropelvic junction obstruction +/- UTI
Fanconi syndrome features / investigation findings?
- glucose +++ Protein ++ on urinalysis
(due to Proximal tubular cells not reabsorbing glucose and aas) - HypoK, HypoCa, HypoPO4
(failed reabsorption of electrolytes)
what part of the kidney is implicated in Fanconi syndrome?
proximal convoluted tubule
Features of phenylketonuria?
- usually presents by 6 mo with developmental delay
- classically fair hair, blue eyes
- learning difficulties
- seizures, typically infantile spasms
- eczema
- “musty” odour to urine and sweat
Defect in phenylketonuria?
defect in phenylalanine hydroxylase
- leading to high levels of phenylalanine *neurotoxic
what cell type mediates hyper acute organ rejection?
B cells
What cell types mediate acute/ chronic organ rejection?
T cells
features of Bartter’s syndrome?
- metabolic alkalosis
- low Na, K, Cl
- polyhydramnios typical in neonatal form
gene defect assoc w Li-Fraumeni?
p53
which part of the cell cycle determines the length of the cell cycle?
G1
shortest phase of the cell cycle?
M phase: mitosis
brown/bluish pigment of the ear cartilage or sclera, arthropathy, renal stones, cardiac valve involvement and coronary calcification.
Alkaptonuria
- auto reccessive
- elevated Homogentisic acid (HGA) which polymerises and deposits in connective tissue throughout the body
features of alkaptonuria?
- pigmented sclera
- urine turns black if exposed to air
- intervertebral disc calcification may result in back pain
- renal stones
pathophysiology of alkaptonuria?
auto recessive. build up of toxic HGA (Homogentisic acid)
treamtent of alkaptonuria?
high dose vit c, dietary restriction of phenylalanine and tyrosine
what complement deficiency causes one to be particularly prone to Neisseria meningitidis infection?
C5-9
- encodes the MAC
what complement deficiency predisposes to Leiner disease: recurrent diarrhoea, wasting, seborrheic dermatitis?
C5 deficiency
E.g.s of Type IV T cell mediated hypersensitivity reactions?
- Tuberculosis / tuberculin skin reaction
- Graft versus host disease
- Allergic contact dermatitis
- Scabies
- Extrinsic allergic alveolitis (especially chronic phase)
- Multiple sclerosis
- Guillain-Barre syndrome
Examples of type V mediated hypersensitivity reactions?
Graves disease, myasthenia gravis
- antibodies that bind cell surface receptors and either block/ stimulate
equation for standard error of the mean?
-ie. measure of the spread expected for the mean of the observations.
SEM = Standard deviation/ Square root (n= sample size)
What is the lower/ upper limit of a 95% confidence interval?
LOWER LIMIT: mean - (1.96 * SEM)
Upper limit: mean + (1.96 * SEM)
what percentage of values lie within 1/ 2/ 3 SD of the mean?
- 3% - 1 SD
- 4% - 2 SD
- 7% - 3 SD
equation relating standard deviation from variance?
SD = square root (variance)
Homocystinuria features?
- fine fair hair
- Arachnodactyly, marfinoid, osteoporosis/ kyphosis
- neuro: LD, seizures
- ocular: myopia, inferonasal lens dislocation
- increased risk of VTE/ arterial clot
- malar flash/ libero reticularis
Diabetic nephropathy histological findings?
Kimmelstiel-Wilson lesions, nodular glomerulosclerosis
what nerves go through the optic canal?
CN II - optic
What nerves go through the superior orbital fissure?
CN III, IV, V1, VI
what nerves go through the inferior orbital fissure?
Zygomatic nerve and infraorbital nerve of maxillary nerve (CN V2), Orbital branches of the pterygopalatine ganglion
what nerve goes through the foramen rotundum?
CN V2 - maxillary nerve
what nerve goes through the foramen ovale?
mandibular nerve - CNV3
what nerves go through the jugular foramen?
CN IX, X, XI
what statistical test is used to compare proportions or percentages following 2 different interventions?
Chi squared test
What cell receptor is a co-receptor for MHC Class I molecules?
CD8
what cell receptor is a co-receptor for MHC Class II molecules?
CD4
what cell receptor is expressed on Reed-Sternberg cells?
CD15, CD30
what cell receptor is receptor for EBV?
CD21
What cell receptor acts as the FAS receptor involved in apoptosis?
CD 95
immunological changes seen in progressive HIV infection?
increased B2-microglobulin, polyclonal B cell activation.
- decreased CD4, IL-2, NK cell function, reduced delayed hypersensitivity responses.
what hormone lowers appetite?
leptin
- produced by adipose tissues, works on satiety centres in the hypothalamus
what hormone increases appetite?
ghrelin
- produced mainly by the P/D1 cells lining the fundus of the stomach and epsilon cells of the pancreas.
- Ghrelin levels increase before and decrease after meals
northern blotting used to..?
detect RNA
SNOW- DROP
Southern blotting used to…?
detect DNA
SNOW - DROP
what stage of the cell cycle is under p53 influence (regulating apoptosis)?
G1
What does endothelin do?
potent, long acting vasoconstrictor and bronchoconstrictor
what promotes release of endothelin?
- angiotensin II
- ADH
- hypoxia
- mechanical shearing forces
what inhibits release of endothelin?
- nitric oxide
- prostacyclin
where is endothelin secreted from?
secreted initially as a prohormone by the vascular endothelium
- later converted to ET-1 by endothelin converting enzyme.
what stimulates respiration in the central chemoreceptors of the brain??
raised [H+] (more acidic)
what stimulates respiration in the peripheral chemoreceptors of the body??
carotid + aortic bodies: raised pCO2 & [H+],
to a lesser extent low pO2
what is the Hering-Bruer reflex?
lung distension causes slowing of respiratory rate
sensed by stretch receptors
Management of Fabry disease?
enzyme replacement therapy with agalsidase alfa (alpha-galactosidase A.)
the addition of mannose-6-phosphate to proteins designates transport to which organelle?
lysosome
what does trop T bind to?
tropomyosin,
forming a troponin-tropomyosin complex
what does Troponin C bind to?
calcium ions.
- trop C is released by damage to both skeletal and cardiac muscle, making it an insensitive marker for myocardial necrosis
what does Troponin I bind to?
binds to actin,
to hold the troponin-tropomyosin complex in place,
specific to myocardial damage
how to calculate odds?
number of people who incur a particular outcome / no of ppl who do not incur the outcome..
odds ratio?
odds ratio = ratio of odds of a particular outcome with experimental treatment and that of control
how to calculate pulse pressure?
systolic pressure - diastolic pressure
factors which increase pulse pressure?
- less compliant aorta (tends to occur w advancing age),
- increased stroke volume
how to calculate systemic vascular resistance?
mean arterial pressure/ cardiac output
How to calculate likelihood ratio for a positive test result?
sensitivity/ (1- specificity)
- how much the odds of the disease increases by when test is positive
How to calculate likelihood ratio for a negative test result?
(1- sensitivity)/ specificity
- how much the odds of the disease decreases by when test is negative
mean/ median/ mode for Normal distributions?
mean = median = mode
mean / median/ mode for positively skewed distributions?
mean > median > mode
mean / median/ mode for negatively skewed distributions?
mean < median < mode
which part of the antibody binds to antigens?
Fab (antigen-binding fragment) region
which part of the antibody binds to immune cells?
Fc region (fragment crystallisable region- tail region of an antibody that interacts with cell surface receptors)
conditions assoc w HLA-DR3?
- dermatitis herpetiformis
- Sjogren’s syndrome
- primary biliary cirrhosis
HLA- A3?
haemochromatosis
HLA-B51?
Behcet’s disease
HLA-B27?
- ank spond
- reactive arthritis
- acute ant uveitis
HLA-DQ2/8?
Coeliac
HLA-DR2?
narcolepsy, Goodpastures
HLA-DR4?
- T1DM
- Rheumatoid arthritis (in particular DRB1 gene)
oncogene assoc with neuroblastoma?
n-MYC
oncogene assoc with follicular lymphoma?
BCL-2
oncogene assoc with MEN?
RET oncogene
dry beri beri?
peripheral neuropathy
- secondary to thiamine deficiency
conditions assoc with thiamine deficiency?
- Wernicke’s encephalopathy: nystagmus, ophthalmoplegia and ataxia
- Korsakoff’s syndrome: amnesia, confabulation
- dry beriberi: peripheral neuropathy
- wet beriberi: dilated cardiomyopathy
mitochondrial inheritance + rapid onset visual loss?
Leber’s hereditary Optic neuropathy
stroke like episodes + seizures + lactic acidosis?
MELAS- mitochondrial myopathy, encephalopathy, lactic acidosis and stroke-like episodes.
- mitochondrial inheritance
what is the Bohr effect in respiratory physiology?
Increasing acidity or pCO2 -> O2 binds less well to Hb
What is the Haldane effect in respiratory physiology?
increased pO2 means CO2 binds less well to Hb
what chromosome has the genes for HLA antigens?
chromosome 6