Citric Acid Cycle Flashcards

1
Q

What is another name for citric acid cycle?

A

Krebs cycle or tricarboxylic acid (TCA)

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2
Q

What does the citric acid cycle lead to?

A

Oxidative phosphorylation

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3
Q

Where is the citric acid cycle carried out?

A

Mitochondrial matrix

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4
Q

Where is glycolysis carried out?

A

In cytoplasm

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5
Q

What does pyruvate dehydrogenase complex do?

A

Pyruvate is converted to Acetyl CoA by

pyruvate dehydrogenase

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6
Q

What is pyruvate dehydrogenase complex ?

A
  • Multi enzyme complex
  • Consists of an aggregate of three different enzymes
  • Coenzymes and regulatory molecules
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7
Q

What is pyruvate dehydrogenase complex molecular mass?

A

4 – 10 million daltons

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8
Q

How can you view pyruvate dehydrogenase complex ?

A

Under an electron microscopy

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9
Q

Why is Pyruvate dehydrogenase complex

a complex?

A

Physical proximity prevents release of
intermediates
Each catalyses a part of the reaction from pyruvate to Acetyl CoA

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10
Q

What are the three different enzymes in a pyruvate dehydrogenase complex?

A

E1 E2 E3

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11
Q

What is E1?

A

Pyruvate dehydrogenase

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12
Q

What reaction does E1 catalyse?

A

Oxidative decarboxylation of pyruvate

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13
Q

What is the Cofactor of E1?

A

Thiamine pyrophosphate

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14
Q

What is E2?

A

Dihydrolipoyl transacetylase

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15
Q

What is E3?

A

Dihydrolipoyl dehydrogenase

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16
Q

What reaction does E2 catalyse?

A

Transfer of the acetyl group to CoA

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17
Q

What reaction does E3 catalyse?

A

Regeneration of the oxidised form of lipoic acid

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18
Q

What is the cofactor of E2?

A

Lipoic acid

Coenzyme A

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19
Q

What is the cofactor of E3?

A

FAD

NAD+

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20
Q

Pyruvate + CoA + NAD+ produces…

A

acetyl CoA + CO2 + NADH

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21
Q

What is the citric cycle about?

A

Not proaction of ATP

But removal of electrons and reducing of NADH

22
Q

How many steps are there in the citric acid cycle?

23
Q

What is the first step of the citric acid cycle?

A

1: The acetyl group is carried to the citric acid cycle by CoA

Condensation of oxaloacetate and acetyl CoA is catalysed by citrate synthase

Citrat produced (6C)

24
Q

What is the second step of the citric acid cycle?

A

2: Isomeration of citrate

Isomerisation of citrate to isocitrate is catalysed by aconitase in two steps

The iron facilitates the hydration/hydration reactions during intermediate step

25
What is the third step of the citric acid cycle?
3: Oxidation and decarboxylation of isocitrate Isocitrate is oxidised and decarboxylated by isocitrate dehydrogenase in a two step process
26
How is the third stage of the citric acid cycle controlled?
Allosterically activated by ADP and inhibited by ATP
27
What is the fourth step of the citric acid cycle?
4: Oxidation and decarboxylation of α-Ketoglutarate α-Ketoglutarate is oxidised and decarboxylated by α-Ketoglutarate dehydrogenase complex CoA is required in the reaction similar to the pyruvate dehydrogenase complex
28
What is the fifth step of the citric acid cycle?
5: Cleavage of succinyl CoA The high energy thioester bond is cleaved by succinyl CoA synthetase Release of CoA is coupled to phosphorylation of GDP to GTP leading to phosphorylation of ADP generating ATP
29
Which stages 1-8 is ATP produced in the citric acid cycle?
Stage 5
30
What is the sixth step of the citric acid cycle?
6: Oxidation of succinate Succinate is oxidised to fumarate by succinate dehydrogenase The two electrons and two protons removed are transferred to coenzyme FAD generating FADH2
31
What is the seventh step of the citric acid cycle?
7: Hydration of fumarate Fumarate is hydrated to malate by fumarase The reaction requires the addition of H2O
32
What is the eighth step of the citric acid cycle?
8: Oxidation of malate Malate is oxidised to oxaloacetate by malate dehydrogenase Third (and final) production of NADH + H+
33
How is the Krebs cycle negatively regulated?
By the concentrations of ATP and NADH
34
How is the kerbs cycle positively regulated?
By the concentration of ADP
35
What are control points?
Enzymes
36
What are the key enzymes in control of regulating the citric acid cycle?
Pyruvate dehydrogenase Isocitrate dehydrogenase a-Ketoglutarate dehydrogenase
37
What does a-Ketoglutarate dehydrogenase do to regulate the citric acid cycle?
inhibited by ATP, succinyl CoA and NADH
38
What does Isocitrate dehydrogenase do to regulate the citric acid cycle?
inhibited by ATP and NADH
39
What does Pyruvate dehydrogenase dehydrogenase do to regulate the citric acid cycle?
Irreversible reaction. | Inhibited by ATP, acetyl CoA and NADH.
40
How do arsensic and mercury regulate the citric acid cycle?
Inhibits pyruvate dehydrogenase complex by inactivating the dihydrolipomide component of the transacetylase (E2).
41
How many carbons enter the citric acid cycle?
2 (4 really as two pyruvates were produced in glycolysis)
42
How many carbons leave the citric acid cycle?
2 (4 really as two pyruvates were produced in glycolysis)
43
How many FADH2 molecules produced? How many electrons?
1 (2) | 2 (4)
44
How many NADH molecules produced? | How many electrons?
3 (6) | 6 (12)
45
How many GTP molecules are produced?
1 (2)
46
How many electrons where made via 10 x NADH and 2 x FADH2?
24 electrons
47
What can the 24 electrons produced by 10 x NADH and 2 x FADH2 be used for?
Oxidative phosphorylation
48
What is the catabolic function from the citric acid cycle?
Convergent point for carbohydrate, amino acids and fatty acids metabolism
49
What is the anabolic function from the citric acid cycle?
Formation of amino acid building blocks and heme Formation of fatty acids Forms building blocks of nucleotides Forms storage products
50
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