chapter 9 - bacterial genetics Flashcards

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1
Q

Why do selectable mutations confer an advantage?

A

progeny cells outgrow and replace parent
relatively easy to detect
powerful genetic tool

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2
Q

What are examples of phenotypes you can detect through screening

A
  1. auxotroph
  2. temperature-sensitive
  3. cold-sensitive
  4. rough colony
  5. pigmentless
  6. sugar fermentation
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3
Q

What are examples of phenotypes you can detect through selection?

A
  1. drug-resistant
  2. virus-resistant
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4
Q

What does replica plating screen for?

A

nutritionally defective mutants

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5
Q

What does mutation rate depend on?

A

frequency of DNA changes and efficiency of DNA repair

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6
Q

What are the two types of mutations

A
  1. spontaneous mutation: occurs without external intervention. resulting mainly from errors during DNA replication
  2. induce mutations: caused environmentally or deliberately. resulting from exposure to radiation or chemicals that modify DNA
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7
Q

What are the different types of base pair mutations?

A
  1. silent mutations: do not affect polypeptide sequence
  2. missense mutation: change sequence of amino acids in polypeptide
  3. non-sense mutation: stop codon resulting in truncated (incomplete) protein
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8
Q

What is a revertant?

A

a strain in which original phenotype is restored

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9
Q

What is a true revertant?

A

restore original sequence

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10
Q

What is a supressor mutation?

A

mutation at a different site in the genome that restores the original phenotype

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11
Q

What is the mechanism of major DNA repair and SOS system

A
  1. major DNA damage activates SOS repair system
  2. initiates many DNA repair processes
  3. allows DNA repair without a template by random incorporation of dNTPs
  4. regulated by Lex A and Rec A proteins
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12
Q

what are the 3 mechanisms of horizontal gene transfers?

A
  1. transformation: genetic transfer by which free DNA is incorporated into recipient cell and brings genetic exchange
  2. transduction: genetic transfer fro bacteriophages
    (lytic cycle makes phage)
  3. conjugation: horizontal gene transfer that requires cell to cell contact with plasmid, dna synthesized by rolling circle replication
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13
Q

What are the 3 possible fates of horizontal gene transfers?

A
  1. degradation
  2. replication by itself
  3. recombination with host genome
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14
Q

What is homologous recombination?

A

process that results in genetic exchange between homologous DNA from two different sources

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15
Q

What is the mechanism of homologous recombination?

A
  1. endonuclease nicks one strand of donor molecule
  2. helicase separates nicked from other
  3. single stranded segment binds single-strand binding protein and RecA
  4. strand invasion happens where base pairing displaces other strand of recipient DNA
  5. creates intermediates with heteroduplex regions
  6. strands are separated by enzymes that cut and rejoin to original DNA
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16
Q

What is complementation?

A

when functional wild-type copy is supplied, restoring wild-type phenotype

17
Q

What is mobile DNA

A

discrete segments of DNA that move as a unit from one location to another within other DNA molecules
they are transposable elements (stretching without their own origin of replication)

18
Q

What are the two types of transposable elements in bacteria?

A
  1. insertion sequence: simple transposable element, carrying only one gene that encodes transposase found in chromosomes and plasmids
  2. transposons: larger, contain inverted repeats of transposase gene
19
Q

What is the mechanism for transposition?

A
  1. transposase recogizes, cuts and ligates DNA
  2. When inserted, a short sequence in target DNA at integration site is duplicated
  3. conservative transposition: transposon is excised from on location and reinserted at a second location
  4. replicative transposition: a new copy of transposon is produced and inserted at a second location