Chapter 5- Biological Macromolecules Flashcards
Functional groups that compose proteins
amine group, central hydrocarbon, carboxyl group, and R group.
zwitterionic
- has both charges
- doubly ionized form at neutral pH values
How many different amino acids?
20 different types
amino acid families
- depends on their side chains*
- uncharged polar
- polar, acidic (negative)
- polar, basic (positive)
- nonpolar
cysteine
- side chain has a reactive sulfhydryl group
- disulfide bonds help stabilize a protein structure
disulfide bonds
- help stabilize a protein structure
- can be a component of tertiary structure if it is intrachain.
- can be a component of quaternary structure if it is interchain.
macromolecule polymerization
- dehydration synthesis polymerizes molecules together.
- hydrolysis synthesis (condensation) breaks polymers down.
peptide bonds
- chains of amino acids
polypeptides
- multiple peptide bonds connected through dehydration synthesis.
- has polarity
- has a “N” terminus where the free amine group is
- has a “C” terminus where the free carboxyl group is
- The N- terminus is a function of amino acid #1
Protein functions
- regulate
- signal
- structure
- transport
- movement
- catalysis
Proteins sequences
- primary
- secondary
- tertiary
- quaternary
protein primary structure
- The sequence of amino acids
- Polypeptide backbone
- average polypeptide has 300-500 amino acids
protein secondary structure
- the alphacarbons in the polypeptide backbone allow a high degree of rotation & flexability.
- the amino acid backbone has many polar functional groups
- H bonds within the polypeptide
- can make an alphahelix or beta sheet
- the turns or random coil form depends on the primary structure.
protein tertiary structure
- overall conformation created from interaction with R groups
- primary is stabilized by hydrophobic effect
- hydrophobic core with nonpolar chains
- polar side chains on outside from H bonds with water
protein quaternary structure
- multiple polypeptides create one functional protein
- usually held together by noncovalent bonds
denaturation
- proteins unfolding
- heat, pH changes, ionic strength changes, anything that disrupts the noncovalent bonds holding structures.
lipids
Composed of two molecules
- Fatty acids
- Glycerol
Fats
- storage of energy
- insulation and protection
Fatty acids
- saturated
- unsaturated
saturated fat
- do not have double bonds between carbons
- solid at room temp.
monounsaturated fat & polyunsaturated fat
- double bond causes molecule to bend
- bent molecule causes “kink” and it cannot stack
- liquid at room temp.
triglycerides
- fats
- glycerol with 3 fatty acids joined by dehydration synthesis.
membrane lipids
- major component of cell membranes
- phospholipids
phospholipids
- composed of 3 molecule parts: fatty acids, glycerol, polar group “polar head group”
- also goes under dehydration synthesis
- amphiphilic
- almost all have at least one unsaturated bond