Chapter 2 Flashcards
Protein
Bio-macromolecule made of amino acid chains folded into 3D shape
polypeptide:
Long chain of amino acids.Protein can be made up of one or many polypeptides
Proteome
All the proteins that are expresed by a cell or organism at one given time
Enzyme
Organic molecule(typically protein) that catalyses reactions.
Peptide hormone
Protein signalling molecule
Antibody
protein produced by plasma cells during adaptive immune response
Hydrophobic
Repels and insoluble to water
Hydrophilic
Tendency to be attracted to and dissolve in water
Monomer
building blocks of polymers
Polymer
large molecule made up of monomers
Condensation reaction
reaction where 2 monomers join to form a larger molecule,producing water
Peptide bond
Bond that keeps amino acids together.
Primary structure
refers to the sequence of amino acids in a polypeptide chain
Secondary structure
formation of alpha helixs, b-plated sheets and random coils
Tertiary structure:
Refers to the functional 3d shape of a polypeptide chain
Quaternitry structure:
:2 or more polypeptide chains
Nucleic acid:
Macramolecules (DNA and RNA),polymer made up of nucleotides
Nucleotide
monomer,makes up a nucleic acid
Messenger RNA-
:Carry genetic information from the nucleus to the ribosome
Transport RNA
RNA that recognises specific codons on the mRNA strand and adds the corresponding amino acid to the polypeptide chain, during translation.
Ribosomal RNA
RNA that is a key structural component of ribosomes, assembling proteins
Transcription
Sequence of DNA is used as a template to create complementary sequence of mRNA
Translation
mRNA sequence is read to produce a corresponding amino acid sequence to build a polypeptide chain
Triplet
sequence of 3 nucleotide in DNA that forms a amino acid
Codon
Sequence of 3 nucleotides in m-RNA that forms an amino acid
Start codon
(AUG)
Stop codons
(UAA,UGA,UAG)
Universal
All living organisms use the same codons to code for amino acids
Degenerate
1 amino acid can be coded for by many different codons
Unambiguous
Only 1 codon can code for 1 amino acid
Non-overlapping
each codon must be read individually
Regulatory genes
genes that produced proteins that have the ability to oppress or activate a gene
Structural genes
genes that are responsible for producing proteins that are involved in the structure or function of a cell
Promoter
region to which RNA polymerase binds in transcription
RNA polymerase
Enzyme responsible for constructing a pre-mRNA sequence from a dna sequence during transcription
Enzyme
helps catalyze a reaction
TATA box
a type of promoter region
Introns (only in eukaryotes):
non-coding regions
Exons:
regions of gene that code
Operator (prokaryotes):
where the repressor binds, alters transcription
Repressor protein
Protein coded for by regulatory protein, that prevents gene expression
Gene expression
process of reading information stored within a gene to create a functional protein
Leader region
segment on DNA or RNA that immediately proceeds the coding regio
Transcription factor
proteins that bind to promoter region and control the functioning of RNA polymerase
Alternative splicing
:Process where different exons may be spliced,resulting in a single gene producing multiple different mRNA strands
Anticodon
- sequence of three nucleotides on tRNA molecule (translation)
Exocytosis
type of bulk transport that moves large substances out of a cell
Trp operon
found within bacteria codes for tryptophan
Trp operon repression:
where repressor proteins bind to operon and stop the transcription of the tryptophan protein
Conformational change
A change of shape in the 3 dimensial shape of protein
Attenuator region:
part of the leader region within the trp operon that allows for attenuation
ribosome
site of protein synthesis
vesicle
a small fluid-field organelle enclosed in in a phospholipid membrane that transports substances around the cell
Rough endoplasmic reticulum
folds and transports proteins
Transport vesicle
transports proteins
Golgi apparatus
modifies and packages proteins
Secretory vesicle
transports proteins
Substrate
reactant of a reaction catalyzed by an enzyme
Reactant
molecule that undergoes a transformation into a product.When enzymes are involved the reactant is called the substrate
Active site
site on enzyme that the substrate binds to
Reversible inhibition
enzyme inhibition that involves weaker bonds that can be overcome
Irreversible inhibition
enzyme inhibition that cannot be brocken
Biochemical pathway:
a series of enzyme-catalysed biochemical reactions in which the product of one reaction becomes the substrate of the next reaction
cofactor
any organic or inorganic molecule that assists enzyme function
ATP
Adenine triphosphate, a high energy molecule, provides energy for cellular processes