cell differentiation and gene expression Flashcards
what is the difference between differentiation and modulation?
differentiation : a stable complex change
modulation : a temporary simple change
what is cell differentiation?
the production of different cell types within an organism
what is determination?
The stability of cell differentiation even after cessation of an inducing signal
what are the segments of an embryo called?
somites
what is gene expression?
the whole process leading to the synthesis of a final product of a given gene either a protein or a functional RNA like tRNA
what is modulation?
when cells respond to their external environment/
what is an example of modulation?
βin hepatocytes if alcohol is present they will produce ADH (alcohol dehydrogenase) which breaks down the alcohol.
βThis enzyme will stop being produced if there is no more alcohol present
what is modulation also known as?
adaptation
How did the dolly the sheep experiment prove that all differentiated cells have the complete genome not just the genes they require?
A differentiated epithelial cell of the sheep was fused to the cytoplasm of the sheep oocyte and the cell proliferated to form an embryo. The differentiated cell had all the genes needed to form a sheep/
what is a program of differentiation? and how is it controlled?
β diverse set of cell-type-specific genes that are generally activated in expression during one step in lineage, while others are repressed.
at the level of mRNA transcription
what are DNA probes?
pieces of synthetic DNA with a known sequence that is complementary to the sequence that you are looking for
what are the two mechanisms for the control of gene expression?
chromatin remodelling and specific transcriptional regulation
what are the two configurations of chromatin and how are they different?
βheterochromatin and euchromatin
βheterochromatin is the folded methylated version of DNA
βeuchromatin is the unfolded transcriptionally active DNA .
how does methylation occur?
β strands are separated and there is new strand synthesis, each methyl group gets separated.
βNew strand synthesis happens and there are two new strands which are unmethylated
βmaintenance methyltransferase adds new methyl groups onto the daughter strands.
βThis is how the methylation pattern is remembered in daughter cells.
where does DNA methylation occur and why?
βDNA methylation occurs in stretches of DNA that are rich in CpG pairs which coincide with the promoter regions.
how can unmethylated CpG pairs become methylated?
βCpG pairs are not always methylated, unmethylated pairs can become methylated during gamete formation and this is done by de novo methyltransferase.
what effect does methylation have and give an example of a gene that is mostly methylated and why
β increasing folding and silencing the gene.
βGlobin genes are only needed to make haemoglobin so these genes are methylated in all other cell types of the body
β the transcriptional machinery cannot access it.
what is the difference between a promoter and an enhancer?
βenhancer increases the level of transcription of a gene βpromoter initiates transcription of a gene.
what are master gene regulators?
β regulate transcription of a whole set of lineage-specific genes (a βprogramβ) for a given cell type.
how do master gene regulators work?
βTranscription of the gene for the master gene regulator occurs
β creating the regulatory proteins
βThese proteins then bind to and activate the promoters of different genes coding for proteins that will differentiate the cell.
βthese specialised proteins are made, and then proceed to work on the cell.
what are the three patterns of cell division and give examples
βCells can divide very little but they divide to repair damage e.g endothelium cells or hepatocytes
βCells that cannot divide (terminal differentiation) they are not replaced when they are lost, neurons and lens cells.
βcells that do not divide but they die and can be replaced by somatic stem cells, for example, red blood cells, gut epithelium cells and epidermal cells.
what are some non lethal birth defects due to differentiation?
βaniridia - lack of the iris due to a mutation in PAX6
βCongenital anaemia and thrombocytopenia (platelet deficiency) due to a mutation in a transcription factor called GATA 1