cc4 Flashcards

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1
Q

what are enzymes? and how do they work?

A

biological catalysts. speed up reactions but don’t get used up. offer an alternate pathway with a lower activation energy

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2
Q

what biological reactions are enzymes involved in?

A

metabolism= anabolic and catabolic

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3
Q

what are anabolic reactions?

A

synthesis

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4
Q

what are catabolic reactions?

A

breakdown

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5
Q

what type of proteins are enzymes?

A

globular

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6
Q

what forms the active site?

A

9-12 amino acids

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7
Q

how do substrates and active sites fit?

A

each type of enzyme is specific to one substrate as each active site shape is complementary to the shape of the substrate

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8
Q

how are there different active sites?

A

different sequencing of amino acids and bonds between r groups in tertiary structure

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9
Q

what are the two models of enzyme action?

A

lock and key hypothesis, induced fit

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10
Q

what is lock and key hypothesis?

A

enzyme and substrate are exact fits. enzyme + substrate = enzyme-substrate complex (when bound changes occur to bonds in substrate) = products (enzyme is unchanged, products are different shape so don’t stay bound to active site)

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11
Q

what is the induced fit hypothesis?

A

the shapes of the active site and substrate change slightly to allow enzyme-substrate complexes to form (e.g in lysozyme)

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12
Q

what are the types of enzymes?

A

intracellular and extracellular

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13
Q

what are intracellular enzymes?

A

produced and catalyse reactions within a cell (e.g for the stages of respiration that occur in the cytoplasm)

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14
Q

what are extracellular enzymes?

A

secreted out of cells, catalyse reactions outside of cells (e.g digestive enzymes)

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15
Q

explain the practical of breakdown of starch by amylase.

A

tube 1= 8ml 1% starch, tube 2= 1ml pH 7 buffer and 1ml 1% amylase (leave 3 mins for buffer to affect the enzyme). spitting tile = 3 drops iodine in each well. add enzyme to starch and gently shake. take a sample at 0 mins then every min

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16
Q

what conclusion can be taken from the breakdown of starch by amylase?

A

the longer the amylase is in the starch the lighter the iodine becomes which means there is less starch present

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17
Q

what are the factors that affect enzymes?

A

temperature, pH, substrate concentration, enzyme concentration

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18
Q

how does temperature affect enzymes?

A

as temperature increases the rate increases (at higher temps enzymes and substrate molecules have greater kinetic energy, increased frequency of successful collisions to form enzyme-substrate complexes)

19
Q

what is the optimum temp for humans?

A

37

20
Q

what happens to enzymes at higher temperatures?

A

enzymes denature

21
Q

how do enzymes denature?

A

as temperature increases, atom vibration increases, this leads to the breaking of bonds (e.g hydrogen bonds) in the tertiary structure, the active site changes shape and is no longer complementary to the shape of the substrate, decrease in enzyme-substrate complexes so decrease in rate

22
Q

how does pH affect enzyme activity?

A

enzymes function over a narrow range of pHs, small deviations from optimum bring about reversible changes, large deviations cause the enzyme to denature, this is due to the effect of H+ or OH- ions on bonds in the tertiary structure, decrease in enzyme-substrate complexes = decrease in rate

23
Q

how does low substrate concentration affect enzyme activity?

A

at low substrate concentrations the enzymes only have a few substrate molecules to react with so active sites aren’t working to full capacity, therefore controlling the reaction.

24
Q

how does high substrate concentration affect enzyme activity?

A

at high substrate concentrations (critical concentrations) all active sites are occupied so rate is at maximum, when all enzymes active sites are full it is known as being saturated

25
Q

how does enzyme concentration affect enzyme activity?

A

increase in enzymes means there is more active sites available so rate increases

26
Q

what is turn-over time?

A

number of substrate molecules an enzyme can turn over in a period of time

27
Q

what does it mean that enzymes are reused?

A

only a low concentration needed to catalyse a number of reactions

28
Q

how should temperature, pH, substrate conc and enzyme conc be controlled?

A

temp= water bath, pH= pH buffer solution, substrate + enzymes = same conc and volume (measuring cylinder)

29
Q

what is the control experiment for enzymes?

A

boiled then cooled enzyme (denature it) with sake conditions/ conc to show there’s no other factors that affect rate

30
Q

what are inhibitors?

A

slow/stop enzyme catalysed reactions

31
Q

what are the two types of inhibitors?

A

competitive and non-competitive

32
Q

how do competitive inhibitors work?

A

I and S are similar shapes, I can fit into E’s active site which prevents S from binding, this reduces the frequency of collisions to form E-S complexes, rate decreases

33
Q

how does conc of substrate affect inhibitors?

A

at low substrate conc I decreases rate but at high substrate conc there rate is not affected. this is because there are so many S molecules that they are more likely to collide with the active site than the I

34
Q

how do non-competitive inhibitors work?

A

S and I are different shapes, I can’t bind to the active sit but binds to allosteric site, disrupts bonding in active site so it changes shape, E and S are no longer complementary, fewer E-S form, rate decreases

35
Q

how does substrate concentration affect non-competitive inhibitors?

A

even at high S concentrations the rate is reduced, this is because ! doesn’t bind to active site so the active sites shape could have been changed already

36
Q

what are ‘free’ enzymes?

A

able to move

37
Q

what are immobilised enzymes?

A

are not able to move

38
Q

what are immobilised enzymes attached to?

A

inert support (unreactive)

39
Q

what are the two methods of immobilised enzymes?

A

entrapment in sodium alganate beads, cross linking to attach to a cellulose pad

40
Q

what is clinistix?

A

used to test the conc of glucose in urine (symptom of diabetes)

41
Q

what are biosensors?

A

used by diabetics to test blood glucose, also used to detect chemicals (e.g pollutants)

42
Q

what are the advantages of immobilised enzymes?

A

enzyme can be kept separate / removed from the product, easy to reuse (decreases cost of industrial process), product is not ‘contaminated’ with enzyme (good because some people can be allergic to an enzyme), they are more stable so this method provides a barrier against these changes, enzymes work over wider range of pH, enzymes denature at higher temps (so can use higher temp=faster rate)

43
Q

what are the disadvantages of immobilised enzymes?

A

initial cost and time needed for immobilisation, initial and maximum rate of reaction may be lower (harder to form E-S complexes)