Case 2 Flashcards

1
Q

Describe the cell cycle.

A
  • G1/G0: a growth phase in which the cell increases its mass
  • S: DNA replication
  • G2: second growth phase
  • Mitosis DNA Replication
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Describe the process of DNA replication.

A
  1. DNA replication takes place at multiple points in the DNA, called origins of replication (or consensus areas).
  2. An enzyme called DNA helicase unwinds the double-stranded DNA. At the origins of replication, bifurcated Y-shaped structures (this is the point where the splitting by the helicase starts) known as replication forks appear.
  3. The synthesis of both complementary antiparallel DNA strands (sense strands) occurs in the 5’prime to 3’prime direction.
  4. One sense strand, known as the leading strand, is synthesized as a continuous process. The other strand, known as the lagging strand, is synthesized in pieces called the Okazaki fragments, which are then joined together as a continuous strand by the enzyme DNA ligase.
  5. An enzyme called RNA primase adds a primer to the leading strand.
  6. DNA polymerase binds to this primer, adding new complementary nucleotides to each strand. (A-T and G-C).
  7. DNA polymerase can only bind nucleotides in the 5’prime to 3’prime direction.
  8. Therefore, the lagging strand is synthesised in pieces.
  9. DNA ligase seals up the fragments into one long continuous strand.
  10. A subunit of the DNA polymerase proofreads the new DNA.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Describe the process of mitosis.

A

PROPHASE:
- Chromosomes condense. • Mitotic spindle begins to form. Two centrioles form in each cell, from which microtubules radiate as the centrioles move towards opposite poles of the cell.

PROMETAPHASE:
- Nuclear membrane begins to disintegrate, allowing the chromosomes to spread around the cell. • Each chromosome becomes attached at its centromere to a microtubule of the mitotic spindle.

METAPHASE:
- Chromosomes become aligned along the equatorial plane or plate of the cell, where each chromosome attached to the centriole by a microtubule forming the mature spindle. • At this point the chromosomes are maximally contracted and so are more easily visible. • Each chromosome resembles the letter X in shape, as the chromatids of each chromosomes have separated longitudinally but remain attached at the centromere, which has not yet undergone division.

ANAPHASE:
- Centromere of each chromosome divides longitudinally. • The two daughter chromatids separate to opposite poles of the cell.

TELOPHASE:
- The chromatids, which are now independent chromosomes consisting of a single double helix, have separated completely. • The two groups of daughter chromosomes each become enveloped in a nuclear membrane. • Cell cytoplasm separates (cytokinesis), resulting in the formation of two new daughter cells, each of which contains a complete diploid chromosome complement.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Describe the process of meiosis.

A

MEIOSIS 1
This is sometimes referred to as the reduction division, because it is during the first meiotic division that the chromosome number is halved. (92 chromatids to 46 chromatids)
PROPHASE 1: Chromosomes enter this stage already split longitudinally into two chromatids joined at the centromere. • Chromosomes become visible as they start to condense. • Homologous chromosome pairs align directly opposite each other, a process known as synapsis. • Each pair of homologous chromosomes, known as a bivalent, becomes tightly coiled. Crossing over (recombination) occurs at points called chiasmata, during which homologous regions of DNA are exchanged between chromatids. • The homologous recombinant chromosomes now begin to separate but remain attached at the chiasmata. • Separation of the homologous chromosome pairs proceeds as the chromosomes become maximally condensed.
METAPHASE 1 • Nuclear membrane disappears. • Chromosomes become aligned on the equatorial plane of the cell where they have been attached to the spindle, as in metaphase of mitosis.
ANAPHASE 1 • Chromosomes now separate to opposite poles of the cell as the spindle contracts.
TELOPHASE 1 • Each set of haploid chromosomes has now separated completely to opposite ends of the cell. • Two new daughter gametes – secondary spermatocytes or oocytes.

MEIOSIS 2: This is similar to mitosis. Each chromosome which exists as a pair of chromatids becomes aligned along the equatorial plane and then splits longitudinally, leading to the formation of two new daughter gametes, known as spermatids or ova.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What are the consequences of meiosis?

A

When considered in terms of reproduction and the maintenance of the species, meiosis achieves two major objectives: 1. Ensures haploid number of chromosomes in daughter cells. 2. Generating genetic diversity. This is achieved in two ways: • Random assortment. • Crossing over.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

How does the risk of Down’s syndrome change with age?

A
  • Risk of DS increases with maternal age

- 17 years risk = 1/1550, 47 years risk = 1/30

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Describe the antenatal screening programme. What can come from it?

A

Blood tests and ultrasound
- Screening for Down’s, Edward’s and Patu syndrome
- High risk results can be confirmed via invasive testing
- High risk cut off 1:150
Anomaly scan at around 20 weeks
- Amnio if possible chromosome abnormality e.g. defects in multiple systems
- Referral to genetics

  • Blood test: this is carried out between 9 to 13 weeks of gestation.
  • Ultrasound: this is carried out between 11 to 13 weeks of gestation. A special type of ultrasound scan, known as nuchal translucency, measures the pocket of fluid behind the baby’s neck. Babies with Down’s syndrome usually have more fluid in their neck than normal.
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Describe the combined test in the antenatal screening programme.

A

Carried out between 11+2 and 14+1 weeks gestation

  • Maternal serum biochemistry measurements of serum beta-HCG and PAPP-A
  • Nuchal translucency (measured at the 12 week scan) – measuring the fluid at the back of the baby’s neck
  • Age

-> Give someone an individual risk for their pregnancy

Increase nuchal translucency can be indicative of Downs and other genetic diseases – often other chromosome problems

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Describe the quad test in the antenatal screening programme.

A
  • 2nd trimester (if you miss the window for the combined test)
  • From 14+2 – 20 weeks but optimal 15-19 weeks
  • Measures beta-HCG, inhibin A, unconjugated oestriol (Ue3) and alphafetoprotein (AFP) – measuring serum levels in the blood
  • Combined is test of choice but quad used for women too late for first trimester screening and in trusts where combined not introduced
  • Not quite the same accuracy as the combined test
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What is non-invasive prenatal testing?

A
  • Cell-free nucleic acids (DNA & RNA) in blood (cffDNA)
  • 10-20% in pregnant woman come from the placenta and represent the fetus
  • Can be detected from 7 weeks however the level of cffDNA (cell-free fetal DNA) reaches a level suitable for analysis at different gestations according to what is being tested for
  • Already in practice to determine sex for sex-linked disorders
  • Non-invasive technique therefore safe to pregnancy
  • Results possible from as early as 9 weeks
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What is genetic screening?

A
  • This is a way of assessing the likelihood of a baby developing, or already having developed, an abnormality during your pregnancy
  • It cannot diagnose conditions, but may help with the decision to have pre-natal diagnostic tests
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What is The Abortion Act?

A

Abortion Act 1967, as amended:
Abortion is legal when a pregnancy is terminated by a registered medical practitioner if two registered medical practitioners are of the opinion, formed in good faith:
a) That the pregnancy has not exceeded its twenty-fourth week and that the continuance of the pregnancy would involve risk, greater than if the pregnancy were terminated, of injury to the physical or mental health of the pregnant woman or any existing children of her family; or
b) * that the termination is necessary to prevent grave permanent injury to the physical or mental health of the pregnant woman; or
c) * that the continuance of the pregnancy would involve risk to the life of the pregnant woman, greater than if the pregnancy were terminated; or
d) * that there is a substantial risk that if the child were born it would suffer from such physical or mental abnormalities as to be seriously handicapped
*there is no time limit on the term of the pregnancies to which grounds b)-d) may apply

The Abortion Act goes on to state that ‘in determining whether the continuance of pregnancy would involve such risk of injury to health as is mentioned in paragraph a) to b)…, account may be taken of the pregnant woman’s actual or reasonably foreseeable environment – if the termination is immediately necessary to save the life or to prevent grave permanent injury to the physical or mental health of the pregnant woman, the pregnancy may be terminated if one registered medical practitioner is of the opinion, formed in good faith that an abortion is justified within the terms of the Act – any treatment for the termination of pregnancy must be carried out in an NHS hospital or in an approved independent sector place – it is good practice to make patients aware of all choices available – they include continuation of pregnancy, with subsequent adoption; continuation of pregnancy and keeping the child; and elective abortion during second and third trimester

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What is euploidy?

A
  • Any exact multiples of N are referred to as euploid
  • Increase in number of complete sets of chromosomes
  • E.g. diploid 2n, triploid 3n, tetraploid 4n
  • Have an equal number of all the chromosomes of the haploid set
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What is polyploidy?

A
  • Polyploidy is a state in which cells have chromosomes in multiples of N greater than 2N
  • Change in the number of chromosome sets – e.g. 3n triploidy, 4n tetraploidy
  • More common in plants
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What is aneuploidy?

A
  • Aneuploidy is a state in which there is a variation in number of chromosomes that is not in multiples of N
  • Variation in the number of a particular chromosome within a set
  • E.g. trisomy (2n+1) (one extra chromosome), monosomy (2n-1), nulisomy (2n-2)
  • This is more common in animals
  • Turner’s syndrome, Down’s syndrome
  • Change in the number of chromosomes in each set
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Explain triploidy and tetraploidy.

A
  • Triploidy is the commonest form and usually results in a miscarriage of the foetus
  • E.g. 69 XXY
  • Triploidy arises by:
  • fertilisation of an egg by two spermatozoa (dispermy)
  • fertilisation of a diploid gamete which results from a failure of maturation of the egg or sperm ?????
  • Tetraploidy arises from failure of completion of the first zygotic mitotic division and is incompatible with life
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

Explain some of the types of aneuploidy.

A
  • An extra copy of a particular chromosome is referred to as trisomy of that chromosome
  • Loss of a copy of chromosome is referred to as monosomy of that chromosome
  • All complete monosomies of autosomal chromosomes (1-22) are lethal although partial monosomies may be observed in unbalanced translocations
  • The only complete monosomy that is not lethal is that of the X chromosome and this presents as Turner syndrome
  • E.g. 47XYY – sex chromosomal aneuploidy
  • This can result from:
  • non-disjunction – failure of chromosomes or sister chromatids to separate at anaphase in cell division
  • anaphase lag – delayed movement of chromosomes after separation at anaphase
  • The end result of non-disjunction during meiosis or mitosis is one daughter cell with an extra copy and the other daughter cell lacking a copy of the affected chromosome
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What is Turners syndrome?

A
  • 45 XO
  • Aneuploidy
  • Monosomy X
  • Autosomal regions on sex chromosomes which means that for some genes you may need to genes worth of it so that causes the problems with just having one X chromosome
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

What is the distinction between aneuploidy and polyploidy?

A

The distinction between aneuploidy and polyploidy is that aneuploidy refers to a numerical change in part of the chromosome set, whereas polyploidy refers to a numerical change in the whole set of chromosomes

20
Q

Explain non-disjunction in meiosis I.

A
  • maternal and paternal chromosomes fail to separate
  • leads to 2 x gametes with two copies of 21 and 2 x gametes with no copies
  • leads to 2 x trisomic daughter cells and 2 x monosomic zygotes
21
Q

Explain non-disjunction in meiosis II.

A
  • sister chromatids fail to separate
  • 1 gamete with two copies of 21, 1 gamete with no copies, 2 gametes with one copy each
  • Leads to 1 trisomic zygote, 1 monosomic zygote, and two disomic zygotes
22
Q

What’s the only way to end up with a XYY genotype?

A
  • If during spermatogenesis in meiosis II there is non-disjunction of YY
  • This would produce a gamete with Y,Y
  • This would produce a zygote with XYY if the sperm fertilises an egg
23
Q

Explain non-disjunction in mitosis.

A
  • One of the sister chromatids fail to separate
  • Or it’s two slow at moving away after separation
  • Leads to one cell trisomic daughter cell and one monosomic one
  • The monosomic one will die out so no need to worry about that but you will be left with a proportion of your cells that will be trisomic – mosaic cells – you won’t get down syndrome
  • But if this happens early on after fertilisation, say in 4 cell stage, you would expect ¼ body cells to be trisomic and therefore you may see it in the phenotype
24
Q

What are structural abnormalities? What do they result from? and how is the rate increased?

A
  • Result from chromosome breakage and usually involve one or two chromosomes
  • Can be spontaneous
  • Rate increased by exposure to mutagenic agents such as ionising radiation and certain chemicals
  • Rate increased in certain inherited conditions with defects of DNA replication and repair e.g., Blooms syndrome
25
Q

What are structural abnormalities that involve a single chromosome?

A
  • Deletions – loss of a part of a chromosome
  • Inversions – inversion of a segment of a chromosome which may (pericentric inversion) or may not (paracentric inversion) involve the centromere
  • Duplications – duplication of a chromosomal segment in tandem or in inverse configuration with the original sequence
  • Isochromosome – duplication of one arm of the chromosome coupled with loss of the other arm so that chromosome consists of two identical arms (p or q)
26
Q

What are structural abnormalities that involve two chromosomes?

A
  • Insertions – breakage of material from one chromosome and insertion into another chromosome
  • Translocation – exchange of material or whole arms between two chromosomes
  • reciprocal translocation: reciprocal exchange of material between two chromosomes (can involve acrocentric chromosomes)
  • robertsonian translocation: only involves acrocentric chromosomes (chromosomes with very small short arms i.e., 13, 14, 15, 21, 22)
27
Q

Explain reciprocal translocation. (e.g. 46, XX, t(1:22) (q25;q13))

A
  • Breakage occurred on chromosome 1 at q25 and translocated with chromosome 22 at q13
  • Normally no clinical impact in the individual because the chance that the breakage in the DNA involved a gene is relatively low as there is so much non-coding DNA
  • But problems arise when they form gametes
  • You can get at least 6 different outcomes from this in meiosis I
  • Cut the meiotic pairing in each plane (the top two and bottom two, the left two and right two, and the ones diagonal to each other)
  • This generates very unbalanced gametes – you can get gametes with mostly blue and very little purple etc.
  • Naming – e.g. 1, 1:10, 10, 10:1 (number to the right of colon is the bit of chromosome stuck on)
  • To know the outcome gametes of the chromosomes above, just think you can get any chromosome with each other (6 options)
  • Then workout what happens at fertilisation (e.g. partial trisomy of chromosome 1 and a partial monosomy of chromosome 10 (PT 1, PM 10))
  • 1:10, 10:1, 1, 10 = carrier of the translocation but may have no phenotypic effects (as long as no gene disrupted)
  • BT = balanced translocation
28
Q

What are the outcomes in reciprocal translocation?

A
  • Normal
  • Carrier of balanced translocation
  • Partial trisomy of one of the involved chromosomes accompanied by partial monosomy of the other chromosome and vice versa
29
Q

Explain Robertsonian translocation. (e.g. 45, XX der (14:21) (q10;q10))

A
  • Two long arms attach together
  • Short arms are lost – they don’t unite together to form a chromosome because a centromere is needed and both centromeres are between both the long arms
  • This doesn’t matter because the material that’s present in the short arms of the acrocentric chromosomes is largely repeated or redundant
  • You are reducing the number of chromosomes by 1
  • E.g. 45, XX der (14:21) (q10;q10)
  • derivative chromosome uses arms from 14 and 21
  • (q10;q10) are the bands that you get the breakages in

Possible ways of slipping the chromosomes:
This can get any one of the starting chromosomes by themselves in a gamete, and any one of them with each other

30
Q

What is another way of getting DS (not aneuploidy)?

A

Robertsonian translocation - partial trisomy 21

31
Q

What are the outcomes in Robertsonian translocations?

A
  • Normal
  • Carrier of balanced translocation
  • Complete trisomy of one of the involved chromosomes
  • Complete monosomy of one of the involved chromosomes = always lethal
32
Q

What are the structural aberrations that could take place affecting a single gene?

A
  • Disrupt a single gene leading to loss of it product
  • Translocate it to region of active chromatin domain so that it is inappropriately expressed (e.g., myc in Burkitts lymphoma)
  • Create chimaeric (hybrid) gene that expresses an altered protein (e.g., ABL in chronic myeloid leukaemia) and therefore has a new function
33
Q

What happens where there is deletion of a small group of genes?

A

The resulting phenotype can be attributed to the lack of product of several genes and is referred to as contiguous gene syndrome.

34
Q

What happens when large regions or whole chromosomes are affected?

A
  • Result in severe birth defects including
  • mental and growth retardation
  • specific abnormalities
  • Largely due to dosage imbalance of only a few genes on those chromosomes
  • for most genes, having an extra copy/lack of one copy of the gene, which results in 50% increase/decrease in its product, is unlikely to be significant
    e. g. Downs syndrome – the effect of having the extra copy of 21 is not due to have extra copy of all the genes on that chromosome, the effect is down to having an extra copy of a few genes
  • Most genes we can live (perfectly) with having one less or an extra copy of it
35
Q

What is the cause of recurrent miscarriages?

A
  • Aneuploidy
  • Around 5% of all clinically recognised pregnancies are trisomic or monsomic – most of these terminate in utero – aneuploidy is therefore the most genetic cause of miscarriage and congenital birth defects
36
Q

Which stage of meiosis do most aneuploidy errors derive from?

A

Errors in maternal meiosis I

37
Q

How does trisomy and monosomy affect miscarriages?

A
  • Some will be unbalanced (3 copies of one of the chromosomes and 2 copies of the other (trisomy)) – leads to miscarriage or possibly the birth of child with problems
  • Some will be unbalanced (1 copy of one of the chromosomes and 2 of the other (monosomy)) – always leads to miscarriage
38
Q

How does blood pressure change during pregnancy?

A
  • Blood pressure is measured using a sphygmomanometer and is measured in mmHg
  • A person’s blood pressure is considered high when the readings are greater than 140mm Hg systolic or 90 mm Hg diastolic
  • In general, high blood pressure, or hypertension, contributes to the development of coronary heart disease, stroke, heart failure and kidney disease
  • Blood pressure generally declines at the end of the first trimester and rises again in the third trimester
  • Pregnancy hypertension is suggested when systolic pressure increases by 30 mm Hg or diastolic increases by 15 mm Hg
39
Q

How do pituitary hormones change during pregnancy?

A
  • FHS/LH fall to extremely low levels due to the high levels of oestrogen and progesterone
  • ACTH and melanocyte-stimulating hormone increase
  • Prolactin levels increase
  • GH levels fall but overall serum levels increase due to placental production
  • Oxytocin (stimulates uterine muscles to contract) levels increase to a peak at term
  • ADH levels are unchanged
40
Q

How oestrogen and progesterone produced? what stimulates them to increase during pregnancy? and what takes over their production?

A
  • The corpus luteum is what produces this oestrogen and progesterone
  • Day 5 – there’s a low oestrogen:progesterone ratio as corpus luteum has produced a lot more progesterone – this is necessary for implantation of the blastocyst
  • hCG produced by the trophoblast – lets corpus luteum know that there’s been a successful implantation into the endometrium
  • continued presence of oestrogen and progesterone suppresses other follicles
  • hCG levels peak around week 9 and then fall – signal to the corpus luteum to finally start shrivelling up
  • then the placenta takes over – specialised trophoblast cells, called syncytiotrophoblast cells make progesterone and estriol
  • the placenta also makes a bit of hCG and human placental lactogen
41
Q

How does the cardiovascular system change during pregnancy?

A

It has to expand due to…

  • needs of mum
  • expanding uterus
  • growing fetus
  • potential for blood loss
  • high volume state = pregnancy – blood volume increases by 30-50%
  • the number of RBC increases a bit but there’s a much bigger increase in plasma levels
  • this means the haematocrit ends up going down = physiological anaemia of pregnancy
  • heart rate increases by 20 bpm
  • mild hypertrophy – goes away after pregnancy
  • blood pressure lowers – progesterone causes vessels to dilate
  • the uterus pushes up on the diaphragm, nudging the heart slightly upward and shifting the point of maximum intensity a bit to the left (where taps against chest wall)
  • uterus presses on pelvic veins, which can lead to varicose veins and swelling in the lower legs and ankles
  • when lying down, the uterus presses on the inferior vena cava which causes less blood to flow to the right atrium and so causes hypotension
42
Q

How do the lungs change during pregnancy?

A
  • uterus presses on diaphragm making it harder for pregnant women to breathe comfortably
  • however, progesterone relaxes ligaments which causes changes that lead to increased tidal volume and minute volume
43
Q

What do progesterone and relaxin both do?

A

Progesterone and relaxin, produced by the placenta, both loosen ligaments between the sacroiliac joints and symphysis pubis in preparation for labour

44
Q

How do breasts change during pregnancy?

A
  • due to increased oestrogen and progesterone
  • increased breast tissue and increased blood supply can cause breast tingling, fullness and tenderness
  • the hormones also stimulate the anterior pituitary to produce prolactin – responsible for milk let down – however progesterone inhibits prolactin until it’s needed
45
Q

What is the social model of disability?

A

The social model of disability says that disability is created by barriers in society. These barriers generally fall into three categories:

  • the environment — including inaccessible buildings and services
  • people’s attitudes — stereotyping, discrimination and prejudice
  • organisations — inflexible policies, practices and procedures.

Using the social model helps identify solutions to the barriers disabled people experience. It encourages the removal of these barriers within society, or the reduction of their effects, rather than trying to fix an individual’s impairment or health condition.

46
Q

What are factors influencing perceptions of risk?

A
  • Age
  • Previous experiences
  • Cultural / religious values
  • Attitudes and sense of control
  • Information
  • Media
  • Social networks