Cancer genetics Flashcards

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1
Q

What is an oncogene?

A

A gain of function mutation that can activate pathways to promote cellular growth.

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2
Q

What are the ways in which proto-oncogenes act as oncogenes?

A
  1. Hyperactive protein made in normal amounts.
  2. Normal protein made in hyper amounts.
  3. A new gene is made due to chromosome fusion.
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3
Q

What drug can be used against the Philadelphia chromosome (CML)?

A

Gleevec, an example of precision medicine!

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4
Q

What is an oncomir?

A

miRNA that behave as oncogenes by inhibiting tumor suppressor genes. Extremely potent

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5
Q

What is Ataxia Telandiectasia (A-T)?

A

A recessive chromosome instability syndrome that modulates cellular responses to DNA damage.

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6
Q

What are the symptoms of A-T and when do they appear/

A

First signs appear around age 2: lack of balance, slurred speech. Progressively degenerates to radiosensitivity, immunodeficiency, and predisposition to cancer.

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7
Q

What defect does radiation cause?

A

Double strand DNA break.

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8
Q

Do XP patients have radiosensitivity?

A

No.

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9
Q

What is a hallmark of A-T?

A

Chromosome restrictions on karyotype.

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10
Q

What is Fanconi Anemia?

A

A recessive chromosome instability syndrome of a FA protein complex that modulates cellular response to DNA damage.

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11
Q

What are symptoms of Fanconi Anemia?

A

Physical abnormalities (e.g. double thumb), bone marrow failure, malignancy

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12
Q

What is Bloom syndrome?

A

A recessive chromosome instability syndrome. The bloom complex and the FA complex work together and fail to respond to DNA damage.

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13
Q

What are the symptoms of Bloom syndrome?

A
Severe growth deficiency
Otitis media
Pneumonia
Infertility
Cancer
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14
Q

What do you see on a Bloom karyotype?

A

Excessive crossing over

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15
Q

What are 3 chromosome instability syndromes?

A

A-T
Franconi Anemia
Bloom Syndrome

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16
Q

What is Knudson’s two hit hypothesis?

A

Developing a loss of function cancer requires a mutation of BOTH alleles.

17
Q

Is Rb dominant?

A

Yes, but incomplete penetrance

18
Q

What gene is mutated in Li Fraumeni syndrome?

A

p53

19
Q

Which BRCA gene can also cause male breast cancer?

A

BRCA2

20
Q

What does “expression profiling” get you?

A

Using a microarray, you can take a tissue and see what genes are expressed and how much.

21
Q

What is hierarchical clustering?

A

Grouping of experimental expression profiles according to similarity. Can do the whole genome at once.