Brain Development Flashcards

1
Q

What layer does neural tissue come from

A

midline ectoderm

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2
Q

What is neurulation

A

The folding of the neural plate to form the closed

neural tube

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3
Q

what do defects in neurulation lead to

how common is this

A

neural tube defects (NTDs) and are fairly common (~1 in 500 live births) – e.g. spina
bifida occulta and the severe complications of myelomeningocele (open spina bifida)

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4
Q

What forms the PNS

A

neural crest cells

NCCs emigrate from dorsal neural tube into the embryo and generate most peripheral neurons and all peripheral glia: all autonomic ganglia (sympathetic, parasympathetic, enteric), almost all somatosensory neurons (all in dorsal root ganglia, most in trigeminal ganglia, all in ‘superior’ ganglia of cranial nerves VII, IX, X)

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5
Q

Where does most of the PNS in the head arise from

A

cranial neurogenic placodes (paired patches of thickened embryonic head ectoderm)

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6
Q

What do the cranial neurogenic placodes form (5)

A

olfactory epithelia (cranial nerve I);

eye lenses; inner ears & their afferent neurons (cranial nerve VIII);

lateral line organs and afferent neurons (fish, amphibia only);

some somatosensory neurons in trigeminal ganglia (cranial nerve V);

all taste & viscerosensory afferent neurons in ‘inferior’ ganglia of cranial nerves VII, IX, and X

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7
Q

How is the anterior posterior axis of the brain developed

A

Neural tissue becomes regionalized under the influence of external signals, establishing domains of expression of different transcription factor genes

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8
Q

What are signaling centres in the brain

A

act as ‘organisers’ by secreting factors that influence the fate of nearby tissue

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9
Q

give an example of signalling centres in the brain

A

midbrain/hindbrain boundary or isthmus develops at the boundary between expression domains of two different TFs (Otx2 in forebrain and midbrain; Gbx2 in hindbrain).

The isthmus secretes FGF8, which patterns the tectum anteriorly and induces the cerebellum posteriorly, in the dorsal part of rhombomere 1

Ventrally, FGF8 acts with Shh (secreted by the ventral midline) to induce dopaminergic neurons in the Otx2+ midbrain and serotonergic neurons in the Gbx2+ hindbrain

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10
Q

What are rhombomeres?

A

hindbrain segments

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11
Q

True or false

due to its complex structure, lots and lots of secreted factors are required for the brain’s development

A

false
Cells expressing different TFs can respond differently to the same secreted factor(s). So, relatively few secreted factors - FGFs, BMPs (‘bone morphogenetic proteins’), Wnts, hedgehog proteins (e.g. Shh), retinoic acid – can be used at different times in different regions to specify the huge diversity of neuronal cell types

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12
Q

What are the key secreted factors controlling brain development (5)

A
FGFs, 
BMPs (‘bone morphogenetic proteins’), 
Wnts,
 hedgehog proteins (e.g. Shh), 
retinoic acid
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13
Q

What is cell identity along the A-P axis patterned by the hindbrain and spinal cord/

A

different combinations of Hox genes

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14
Q

What controls expression of Hox genes

A

opposing gradients of retinoic acid and FGF8 secreted by the paraxial mesoderm

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15
Q

What are Hox genes important for in CNS development

A

regional neuronal identity, axon guidance and circuit formation (shown e.g. by mouse gene knockouts)

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16
Q

What controls development of the dorsoventral axis

A

notochord acts as a signalling centre at the ventral midline, inducing the neural tube floorplate via secretion of Shh.

The floorplate in turn acquires signalling properties, including Shh expression, and patterns the D-V axis of the spinal cord.

The highest concentration of Shh induces floorplate; lower concentrations induce motor neurons and suppress dorsal spinal cord neuronal phenotypes (Shh acts as a morphogen).

The dorsal neural tube is patterned by an opposing gradient of proteins secreted from the roof plate

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17
Q

How are the neural tube cells initially arranged

A

as a neuroepithelium, with multipotent stem cells dividing in the ventricular zone (VZ).

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18
Q

What do the multipotent stem cells in the VZ of the neural tube form

A

generate neurons

also form radial glia which provide an important scaffold for neuroblast migration (e.g., ‘inside-out’ development of the cerebral cortex)

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19
Q

What happens to neuronal stem cells in mammals

what does this mean for production of neurons later in life

A

disappear later in development (probably differentiating into astrocytes) except in a few specialized locations (e.g., hippocampus, olfactory bulb).

Production of neurons ceases in infancy in most regions of mammalian brain, and all neurons are post-mitotic.

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20
Q

What does ‘amoeba on a leash’ refer to

A

the growth cone

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21
Q

What does the growth cone do

A

navigates using actin/myosin interaction to promote motility heading forwards as long as it has a suitably adhesive substrate and is not deflected;
progress is regulated by adhesion and signalling

embryonic
neuroepithelium is highly patterned molecularly, so growth cones successively encounter different cues. These regionally distinct ‘intermediate targets’ act as ‘stepping stones’, guiding axon growth towards the final target.

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22
Q

How do axon scaffolds change over time

A

established when distances are small. Complexity builds up over time: a progressively elaborated axonal scaffold builds on the earliest axonal pathways

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23
Q

What are the 4 general classes of molecules that guide growing axons

A

diffusible attractive
diffusible repellent
contact attractive
contact repellent

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24
Q

Give 2 examples of diffusible attractive molecules that guide growing axons

A

NGF (nerve growth factor - a neurotrophin family member),

netrin

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25
Q

What are the 2 different things a diffusible attractive molecule can be

A

neurotrophic (‘nourishing’, promoting survival and sprouting of neurons),

neurotropic (‘attractive’, promoting chemotaxis of growth cone - chemoattraction)

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26
Q

Give 2 examples of diffusible repellent molecules that guide growing axons

A

eg. semaphorins, Slit

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27
Q

What are growth cone CAMs

A

cell adhesion molecules

they made adhere to
a) large proteins in extracellular matrix (eg. laminin, fibronectin);

b) the same CAM on a neighbouring cell (homophilic adhesion);
c) another CAM on a neighbouring cell (heterophilic adhesion).

Intracellularly, CAMs connect both to the cytoskeleton and to cytoplasmic signal
transducers (eg. tyrosine kinases).

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28
Q

What is homo- and heterophilic adhesion

A

when growth cone CAMs adhere to the same CAM on a neighbouring cell (homophilic) or another CAM on a neighbouring cell (heterophilic adhesion)

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29
Q

Give 3 examples of contact repellent molecules that guide growing axons

A

eg. Semaphorins, Ephrins (bind Eph receptors) and some proteoglycans.

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30
Q

Do growth cones only respond to chemical cues?

A

can also respond to mechanical cues

Retinal ganglion cell axons are more exploratory on soft substrates and more directionally persistent on stiff substrates. They turn away from
stiffer tissue and grow towards softer tissue in vitro and in vivo.
Stiffness correlates with cell density.

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31
Q

Where do the different parts of the retina map to in the tectum

A

temporal (posterior) retina -> anterior tectum;

nasal (anterior) retina -> posterior tectum;

dorsal retina -> ventral tectum;

ventral retina -> dorsal tectum

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32
Q

Describe the experiment Sperry used to demonstrate the chemoaffinity hypothesis

what did he propose

A

In goldfish and adult frogs, Sperry cut the optic nerve & excised half of the retina; axons from the remaining half-retina always regenerated to the correct half-tectum.

Sperry (1963)
proposed the existence of separate chemical gradients in retina and tectum, providing a “chemical code with matching values between the retinal and tectal maps”.

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33
Q

How did Friedich Bonhoeffer use the retinotectal system

A

to identify membrane-associated ephrins and their Eph receptors.

Counter-gradients of ephrins and Ephs in the retina and tectum provide contact-repellent and also contact-attractive cues for patterning

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34
Q

What 2 things must an axon fulfill to synapse correctly

A

must synapse with the right cell type, and also the right part of it

35
Q

How does synpase formation differ in vivo and in vitro

A

Synapses form promiscuously in tissue culture in vitro, but in vivo they are only stabilised on the right types of neurons

36
Q

What 3 things proceed synapse formation

A

i) Axon guidance to the correct target area and adhesion to target neurons, via guidance factors;
ii) Generic synapse formation by synapse-specific adhesion molecules on axons and dendrites, which recruit presynaptic and postsynaptic protein complexes;
iii) Activity-dependent selection to stabilise synapses, by mechanisms such as long-term potentiation (LTP).

37
Q

True or false

once formed an axon will normally survive until adulthood

A

false
There is competition for survival of synapses, axon branches and whole neurons. In many developing neural systems, around half the neurons die just after their axons reach their embryonic targets while connections are being refined

38
Q

How can you rescue developing neurons experimentally

A

by providing extra target tissue

39
Q

What are the 2 types of neuronal selection?

for each, state where it has mainly been studied

A

(i) Neuronal selection by neurotrophic factors (mainly studied in PNS)
(ii) Neuronal selection by correlated activity (mainly studied in CNS)

40
Q

How can you increase or decrease the final number of motor neurons in amphibian or chick embryos experimentally?

Why is this?

A

final number of motor neurons is increased by transplanting an
extra limb bud, and decreased by amputation

These manipulations alter the availability of target-derived neurotrophic support

41
Q

Which factor does ganglion neuronal survival depend upon in the embryo

what is the evidence for this?

A

NGF

Loss of NGF in mouse embryos, via antibodies to pregnant mice or gene knockout, causes loss of all sympathetic and many sensory ganglion neurons

42
Q

How does NGF dictate which ganglion neurons survive in the embyro?

A

Target-derived NGF binds to its receptor (TrkA) at the axon terminal and is transported back to the cell body (retrograde axonal transport) where it prevents expression of the apoptosis

Neurons compete for NGF at the target and the losers die.

43
Q

Is NGF the only important neurotrophic factor in the embryo

A

no
Several neurotrophic factor families support diverse neuronal populations, e.g. the insulin-like neurotrophins (NGF, BDNF, NT3, NT4), and GDNF (which supports dopamine neurons of the substantia nigra and some motor neurons).

44
Q

Which neurotrophic factor is important in dopaminergic neuronal development

A

GDNF - supports dopamine neurons of the substantia nigra and some motor neurons and may be implicated in Parkinson’s

45
Q

What governs neuronal selection by correlated activity?

A

Principles of activity-dependent selection:

a) Selection of correlated input (Hebb’s rule)
b) Selection against uncorrelated input - ‘out of sync, break the link’
c) Selection of correlated neighbours

46
Q

What does ‘selection of correlated input’ in the principles of activity dependent selection refer to

where was this shown

A

Hebb’s rule
‘cells that fire together, wire together’ - LTP

shown in hippocampus

47
Q

Where was neuronal selection against uncorrelated input shown

A

NMJ and cerebral cortex including hippocampus

48
Q

Which of the prinicples of activity dependent selection in neuronal development is important for establishing maps on a regional scale

A

selection of correlated neighbours

49
Q

How do we know refining the retinotectal map requires neuronal activity

A

blocking neural activity in the eye, or NMDA receptors in tectum, blocks map refinement/sharpening in tectum

50
Q

What happens if both eyes are routed to same tectum in frog/ goldfish

what does this demonstrate

what is this an example of

A

they form ocular dominance ‘stripes’ by the same mechanism as the retinotectal map; this depends on correlated activity of neighbouring inputs.

So even in a completely novel anatomical situation, CNS connections can sort out according to the incoming information

striking example of developmental plasticity.

51
Q

What is Wallerian degeneration

A

Following crush or cut, the ‘distal

stump’ of the axon degenerates, as does myelin

52
Q

Overall, how does the rest of the neuron react if the axon is cut/crushed

A

soma survives and reacts by re-expressing genes for axonal growth.
Schwann cells react adaptively to promote regeneration, phagocytosing myelin and secreting cytokines and growth factors

53
Q

Can proximal stump axons regenerate?

A

yes -
but only if a track (‘endoneurial tube’) of living Schwann cells is present to guide them. After a complete break of >~1 cm, axons merely sprout into a local swelling (a neuroma), which may produce intractable pain. But if a track is present, regeneration can occur for many centimetres - albeit slowly

54
Q

What must be present for a proximal stump axon to regrow

A

an endoneurial tube

55
Q

Give 2 major challenges for functional recovery after peripheral nerve damage

A

(1) axons growing into the ‘wrong’ endoneurial tubes, so they innervate targets they did not previously innervate;
(2) chronic axotomy, where axons are regenerating but have not yet reached their targets - denervated Schwann cells progressively lose the growth-supportive phenotype.

56
Q

How might we be able to clinically aid peripheral nerve recovery after being cut/crushed (2)

A

surgical manipulations

Tissue engineering and stem cell-based approaches are intensively researched but not yet in clinic.

57
Q

What kind of surgical manipulations can be used to aid peripheral nerve regrowth

A

nerve and tendon transfers and acellular bridges

58
Q

What are the 2 major ways CNS damage can occur

A

i) Ischaemic injury (‘stroke’)

ii) Neurodegenerative diseases (eg. Parkinson’s and Alzheimer’s disease; also multiple sclerosis).

59
Q

How does ischaemic injury occur

A

mechanism mainly ‘excitotoxic’, leading to increased intracellular calcium which damages or kills neurons.

60
Q

What is the effect of neurodegenerative diseases on the CNS?

Can it be stalled?

A

Loss of neurons is permanent, with very little recovery of function other than through learning processes using intact neural circuits (plasticity) and rehabilitation where appropriate.

So far, trials to delay the loss of neurons (eg. ‘neuroprotection’ using NMDA receptor blockers; neurotrophic factors) have had little success.

61
Q

Has neural grafting has any effect on restoring nerve function after neurodegenerative diseases?

A

Restoring lost brain neurons by grafts of foetal brain cells has been tried, with some success, by grafting foetal substantia nigra cells to treat Parkinson’s disease

62
Q

What happens to Parkinsonian patients who are routinely treated with L-DOPA

A

after ~10 yrs become unstable with oscillating ‘on-off’ symptoms.

63
Q

What are some of the draw backs of the clinical trials of human foetal substantia nigra cells to treat Parkinson’s? (5)

A
  • most patients do not benefit
  • ethical and logistical issues (foetal tissue)
  • most grafted cells die (>90% for substantia nigra cells)
  • grafted tissue not innervated or regulated, and disease process may affect it
  • side-effects (eg. dyskinesia).
64
Q

What is the difference between stem cells and progenitor cells

A

‘Stem cells’ -‘pluri/multi-potent’ cells that divide both to reproduce themselves (‘self-renewal’) and to produce differentiating cells with various phenotypes.

‘Progenitor cells’ -cells that may divide but can generate only defined cell types, eg. neurons, astrocytes & oligodendrocytes

65
Q

Where do stem cells exist in the foetal mammalian brain

A

exist in the ventricular and subventricular zone

they can be grown in tissue culture

66
Q

Where are stem cells found in the adult mammalian brain

A

modern labelling techniques show there are neural stem cells in adult forebrain, with ongoing cell division, supplying new neurons for the olfactory bulb (from sub-ventricular zone at anterior horn of lateral ventricle) and for dentate gyrus granule cells in the hippocampus

67
Q

What do some experts think the stem cells in the adult dentate gyrus granule cells in the hippocampus are there for?

A

involved in learning and in antidepressant drug action

68
Q

Are the stem cells in the adult mammalian brain involved in repair?

A

CNS injury can induce stem cells to produce new neurons in rodents, and they can migrate to site of injury and differentiate.

However, there is no evidence that such neurons have any functional benefit even if they are produced in humans after CNS injury

69
Q

What are iPSCs

A

Induced pluripotent stem cells

may have the same capabilities as embryonic stem cells and could provide a patient-specific source of stem cells that would not cause immune reactivity.

70
Q

How can iPSCs be obtained

A

from differentiated cell types by transfection with genes for 4 “stem cell” transcription factors

71
Q

Are there any current clinical trials for stem cell treatment of Parkinson’s going on

A

A clinical trial of iPSC-derived dopaminergic progenitors has begun in Japan;

trials involving embryonic stem cell-derived cells are underway
in China and in set-up in the USA and the UK/Sweden

72
Q

What is Cajal’s ‘harsh decree’

A

Adult mammalian CNS neurons sprout after injury from the proximal stump, but axons cannot regenerate for >~1 mm, with serious clinical consequences

73
Q

Is Cajal’s harsh decree true for all animals

A

no - CS regeneration (eg. optic nerve) is effective in fishes and amphibia.

74
Q

How well do CNS neurons recover in vivo cf. other nervous systems

A

even if they sprout, many CNS neurons (e.g. Purkinje cells) are less able to regenerate than PNS or foetal CNS neurons (impaired re-expression of growth-associated genes).

75
Q

Can CNS neurons regrow in vitro?

A

many adult CNS neurons can extend axons experimentally, either in vitro or into peripheral nerve grafts implanted in vivo – but not in the injured CNS environment

76
Q

Which factors make the mature CNS environment non-permissive for growth (4)

A
  • Oligodendrocytes and CNS myelin express axon growth-inhibitory proteins - eg. ‘Nogo-A’.
  • Astrocytes proliferate and produce growth-inhibitory chondroitin sulphate proteoglycans (CSPGs) in the brain extracellular matrix.
  • perineural nets
  • Extracellular matrix lacks growth-promoting molecules such as laminin.
77
Q

How do astrocytes act differently for CNS axon regrowth in culture and in vivo

A

While astrocytes are permissive to axon growth in culture, producing CAMs and growth factors, in the injured brain they form a densely interwoven astrocyte scar that causes growing axons to stop.

78
Q

What are perineuronal nets

what do they do

A

specialised extracellular matrix, similar to cartilage.

help to stabilise established neuronal connections, and restrict plasticity (this is aided by the CSPGs found within them)

79
Q

Give 5 possible strategies for repair/regrowth in the CNS

A

i) Promote neuron survival, axon sprouting & growth: eg. neurotrophic factors, chemoattractants.
ii) Block axon growth-inhibitory molecules: eg. neutralising antibodies to Nogo-A
iii) Provide favourable surfaces for axon growth across lesion
iv) provide soures of neurons that might relay signals across lesion
v) promote circuit activity and reorganisation in spared tissue

80
Q

Give an eg of molecule that could work to block growth inhibitory signals

how would it be used

A

chondroitinase - degrades CSPGs

infusion into spinal cord has produced corticospinal axon regeneration, confirmed by electrophysiology and re-lesion, with some return of function.
Nb: It is possible this treatment affects perineuronal nets, rather than the astrocyte scar, enhancing plasticity for recovery

81
Q

Give an example of a way to provide a favourable surface for axon growth across lesion

how successful has this been

A

eg. grafts of Schwann cells, olfactory ensheathing glial cells (OECs)

Randomized blinded trial in dogs with chronic spinal cord injury revealed improvements in local intraspinal connectivity and locomotor outcome after intraspinal transplant of cells derived from cultured olfactory mucosa, with ~50% OECs.

82
Q

How could we provide sources of neurons to relay signals across lesion in CNS

A

Grafts of neural progenitor cells that form neurons, astrocytes and oligodendrocytes within lesion site: enables regeneration of corticospinal axons into sites of severe spinaI cord injury, including into complete spinal cord
transection sites. Example: human neural progenitor cells (from a foetal spinal cord-derived cell line) grafted into rhesus monkey cervical spinal cord injury sites

83
Q

How can you promote circuit activity and reorganisation in spared tissue when there has been a lesion in the CNS

A

epidural electrical stimulation combined with intensive task specific training

  • has been remarkedly successful, reportedly allowed paralysed organism to walk but requires proprioception
84
Q

How is epidural electrical stimulation meant to work

A

activates proprioceptive afferents in the dorsal (posterior) roots of the spinal cord, thus recruiting proprioceptive circuits within the spinal cord to activate motor neurons.

“repeated activation of the sensorimotor system augments activity-dependent plasticity of spared circuits and residual neural connections, which leads to functional improvements”