Biomarker Testing Flashcards
Up to ___% BTC are HER2 Positive?
30%
T/F? HER 2 Testing may not be routine?
T
____ Drives tumor growth
HER2 overexpression
IHC uses ______ as a sample type and tests for ________
Tissue and Protein Overexpression
ISH uses_____ as a sample type and tests for_______
Tissue or liquid (biopsy), and Gene amplification
NGS uses _________ as a sample type and tests for ____________
Tissue or liquid, and Gene amplification,
gene alterations and activating mutations
What test uses labeled antibodies added to tissue sample (biopsy specimen)?
IHC
IHC 0 for a biopsy specimen
No reactivity in any tumor cell
IHC 1+ for a biopsy specimen
Tumor cell cluster (>5 tumor cells) faint stain. Membranous reactivity.
IHC 2 + for a biopsy specimen
Tumor cell cluster (>5 tumor cells) weak to moderate complete, basolateral or lateral membranous activity
IHC 3+ for a biopsy specimen
Tumor cell cluster (>5 tumor cells) weak to STRONG complete, basolateral or lateral membranous activity
IHC 2+ is…
Equivocal, reflex FISH on same specimen OR: New IHC test on new specimen if original specimen is unavailable
IHC 0 or 1+
HER2 negative
IHC 3+
HER2 positive
IHC 0 on surgical resection specimen
No reactivity in <10% tumor cells
IHC1+ on surgical resection specimen
faint/barely perceptible membranous reactivity >10% tumor cells
IHC2+ on surgical resection specimen
Weak to moderate complete, basolateral or lateral membranous activity in >10% of tumor cells.
IHC3+ on surgical resection specimen
Strong, complete, basolateral or lateral membranous in >10 tumor cells
ISH can detect chromosome abnormalities such as:
Copy number and Structural alterations (eg. Gene rearrangements)
During ISH a probe targeting a specific _____ or _____ sequence is added to a sample
mRNA or DNA
ISH results are reported as
Positive or Negative for HER2 amplification
FOR GEA: Reflex FISH testing results can be either:
HER2/CEP17 Ratio <2
HER2/CEP17 Ratio >2 (HER2 Positive)
FOR GEA: If HER2/CEP17 ratio <2.0 and CEP17 <3.0/cell then_______
HER2 Negative
FOR GEA: If HER2/CEP17 ratio <2.0 and CEP17 >3.0/cell and HER2 <4.0/cell then
HER 2 Negative