Biology Midterm - Cycle 1-6 Flashcards
What is the difference between eukaryotes and prokaryotes?
Eukaryotes: linear DNA and membrane bound nucleus
Prokaryotes: circular DNA and no nucleus
How do prokaryotes and eukaryotes reproduce?
binary fission vs mitosis/meiosis
Examples of eukaryotes?
Multicellular: animals (metazoans), plants, some fungi
Unicellular: protists, some fungi
examples of prokaryotes?
Bacteria and Archaea
Why are viruses not cellular life?
- not made of cells so they cannot create proteins on their own
What are obligate parasites?
VIRUSES - must infect a host cell to create proteins and replicate
What is the structure of a virus?
protein shell (some with lipid envelope) with NUCLEIC ACID genome - DNA or RNA; single or double stranded
What is HIV?
- type of simian IV - retrovirus
- causes AIDS
- disrupts immune system
What is an SIV?
- zoonotic disease that spills over from closely related nonhuman primates
Why are spillover events dangerous?
more harmful for new host than the original host species
How does a retrovirus impact protein creation?
REVERSE TRANSCRIPTION from RNA of virus –> DNA of host
1. DNA replication of HIV genome
2. DNA transcripts to RNA of HIV genes
3. RNA translates HIV genes to proteins
What is the normal protein creation process?
- DNA replication
- DNA transcripts to RNA
- RNA translates to protein
What is AZT?
First HIV treatment - almost looks like thymine which blocks the addition of more nucleotides when RNA reverse transcriptase uses AZT instead
How does evolution relate to drug resistance?
- enzymes (like reverse transcriptase) develop proofreading ability
- many mutations from base sequence error that might make drug resistance or not
- creates genetic variation where susceptible viruses don’t reproduce and drug-resistant virus reproduce - NATURAL SELECTION
How does mutations affect vaccine development?
- difficult to create a vaccine that is resistant to all possible variants
- multiple drugs can stop viral infection at different points (when it enters the immune cell, when it replicates, when it leaves)
What is evolution?
change in allele frequencies from one generation to the next
What are the principles of NATURAL SELECTION?
- mechanism to explain evolution
- variation of traits is heritable
- favoured traits = better survival = higher fitness
- genotypes with favourable traits become more common
variation (randomly generated) + heritability + non-random survival
What is artificial selection?
selective breeding to ensure certain desirable traits appear more in future generations
Why are belief systems contradictory to evolution?
Intelligent design: people do no descend from animals
Evolution: species change over time
What is a belief system?
relies on beliefs not evidence to form religion
What is scientific theory?
testable hypotheses that try to explain facts and are falsifiable
What is a fact?
an indisputable observation
What is biogeography of evolution?
- similar species found in distant places
- common ancestor produced genetic variation over time
What is comparative morphology in macroevolution?
- similar skeletal structure of dissimilar species
What is a vestigial structure?
structures that served a purpose for an ancestor but not for the modern ancestor
How does geology prove evolution?
earth is billions of years old = plenty of time for slow geological changes
How do fossils prove macroevolution?
evidence of extinct forms of life/life on earth was different
What was Darwin’s natural selection theory?
descent with modification
Jean-Baptiste Lamarck theory
evolution is VARIATIONAL not TRANSFORMATIONAL
What are characteristics evolution?
- GRADUAL
- cannot be “wanted” or “intentional”
- every organism doesn’t perfectly suit their environment
- all species originated from one entity
What is a TRADE OFF?
compromise between traits of competing demands (ex. mating vs camoflauge)
How does a zygotes cell cycle compare to a normal cell cycle?
switches between interphase and mitosis quickly for higher turnover rate –> single cell to a human
How does a zygotes cell cycle compare to a normal cell cycle?
switches between interphase and mitosis quickly for higher turnover rate –> single cell to a human
What is the cell cycle?
INTERPHASE: G1, S, G2
MITOSIS: Prophase, Metaphase, Anaphase, Telophase (cytokinesis)
Why do cells divide?
multicellular growth, tissue repair, regeneration
What is TURNOVER RATE?
frequency of cell moving through cell cycle
Which cells don’t divide? What stage of the cell cycle are they in?
neurons –> G0
Why do we have so many cells? Why is cell division important?
+ SA:-Volume ratio
- able to satisfy demands faster
- more cell membrane for in/out of cell interactions
- not much loss if one cell dies
What are the stages of Interphase?
G1 - cell growth
Synthesis - DNA replication by chromosomal protein duplication
G2 - cell prepares for division
What are cell cycle checkpoints?
internal control that prevents a cell from continuing to the next phase before it is ready
What is the G1/S checkpoint?
- determines if cell is ready to divide
- stops damaged DNA
- checks if the size is big enough
- checks for mutations that need to be fixed
What is the G2/M checkpoint?
- commits a cell to mitosis
- stops DNA if replication error from S
- checks for mutation/DNA damage
What is the MITOTIC SPINDLE CHECKPOINT?
- before metaphase
- are chromosomes properly attached to mitotic spindle for proper alignment at metaphase plate
- influences correct separation at anaphase
What are POSITIVE REGULATORS?
promotes movement to the next cell cycle step (CDKs)
How do CDKs and CYCLINS work?
- Cyclin binds with CDK and gets activated
- Phosphate donating protein phosphorylates complex
- Complex is activated
- Complex phosphorylates target protein
- target protein activated
- Signals cell to move to the next stage
What is a CYCLIN?
protein that regulates CDK activity - 4 types for different stages of cell cycle
What is a CDK?
cyclin-dependent kinase; protein that is a positive regulator
What is phosphorylation?
Donating a phosphate group
When are cyclins PRESENT? ACTIVATED? DEACTIVATED?
- when in CDK complex
- always present
- deactivate when cyclins are degraded
When are CDKs PRESENT? ACTIVATED? DEACTIVATED?
- present only when needed for complex
- activated in complex
- degraded when unnecessary
What are NEGATIVE REGULATORS?
proteins that stop the cell cycle
What is APOPTOSIS?
cell self-destruction when the cell cannot fix itself
What is p53?
important negative regulator
How does p53 work?
- detects DNA damage
- Binds to p21 promotor to increase p21 production
- p21 is a cyclin-CDK inhibitor
- CDK-cyclin complex cannot phosphorylate target protein (cell cycle arrest)
- Sends repair enzyme to DNA damage
- If repaired positive regulation stimulated – if not repaired apoptosis
What happens when p53 is mutated?
- cell doesn’t get repaired or have apoptosis (no cell cell arrest)
- leads to cancer
What is PLOIDY?
the number of chromosome SETS a species has
What is a DIPLOID?
TWO copies of EACH type of chromosome; TWO SETS
What is a HAPLOID?
ONE copy of EACH type of chromosome; ONE SET
What is a CHROMOSOME?
the nuclear unit of genetic information consisting of a DNA molecule and associated protein
What are SISTER CHROMATIDS?
TWO IDENTICAL COPIES of a chromosome held together by a centromere; created during S Phase
What are COHESINS?
Proteins that HOLD sister chromatids together; removed during mitosis
What is ANEUPLOIDY?
ABNORMAL number of chromosomes AFTER ANAPHASE
What is NONDISJUNCTION?
- Both chromosomes connect to the same spindle in anaphase I or anaphase II
- one pole gets BOTH chromosomes the other get NONE
MEIOSIS I vs. MEIOSIS II
MEOSIS I:
- reductional
(diploid - 2n –> haploid - n)
(4 chromosomes –> 2 chromosomes)
- interphase
MEIOSIS II:
- equational
(haploid –> haploid)
(2 chromosomes –> 1 sister chromatid from each)
- no interphase
Why is there no Interphase before Meiosis II?
- policy must change from meiosis I to meiosis II, so no need for S phase
What is RECOMBINATION?
- During prophase I, homologous pairs stack on top of each other and homologous CHROMATID exchange any number of segments at the chiasma
What are LINKED GENES?
genes that are more likely to get inherited together on a chromatid because their loci are located closer together
What is INDEPENDENT ASSORTMENT?
chromosomes at the metaphase plate are segregated to daughter cells independently of each other in metaphase I & II
What is RANDOM FERTILIZATION?
two parents bring different genomes and unite to make a unique zygote